RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
CLPTM1-210ENST00000589158 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
CLPTM1-210ENST00000589158 ABCC9O60706 1549 aa29.99■■■□□ 2.39
CLPTM1-210ENST00000589158 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
CLPTM1-210ENST00000589158 RB1CC1Q8TDY2 1594 aa28.73■■■□□ 2.19
CLPTM1-210ENST00000589158 NACADO15069 1562 aa28.66■■■□□ 2.18
CLPTM1-210ENST00000589158 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
CLPTM1-210ENST00000589158 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
CLPTM1-210ENST00000589158 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
CLPTM1-210ENST00000589158 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
CLPTM1-210ENST00000589158 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.06
CLPTM1-210ENST00000589158 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
CLPTM1-210ENST00000589158 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
CLPTM1-210ENST00000589158 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
CLPTM1-210ENST00000589158 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
CLPTM1-210ENST00000589158 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
CLPTM1-210ENST00000589158 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
CLPTM1-210ENST00000589158 CECR2Q9BXF3 1484 aa26.94■■□□□ 1.9
CLPTM1-210ENST00000589158 SMARCA4P51532 1647 aa26.56■■□□□ 1.84
CLPTM1-210ENST00000589158 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
CLPTM1-210ENST00000589158 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
CLPTM1-210ENST00000589158 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
CLPTM1-210ENST00000589158 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
CLPTM1-210ENST00000589158 MROH2BQ7Z745 1585 aa26.4■■□□□ 1.82
CLPTM1-210ENST00000589158 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
CLPTM1-210ENST00000589158 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
CLPTM1-210ENST00000589158 PEG3Q9GZU2 1588 aa26.27■■□□□ 1.8
CLPTM1-210ENST00000589158 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
CLPTM1-210ENST00000589158 WIZO95785 1651 aa26.08■■□□□ 1.77
CLPTM1-210ENST00000589158 NESP48681 1621 aa25.9■■□□□ 1.74
CLPTM1-210ENST00000589158 ERCC6Q03468 1493 aa25.87■■□□□ 1.73
CLPTM1-210ENST00000589158 TOP2AP11388 1531 aaKnown RBP25.8■■□□□ 1.72
CLPTM1-210ENST00000589158 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
CLPTM1-210ENST00000589158 CADPSQ9ULU8 1353 aa25.73■■□□□ 1.71
CLPTM1-210ENST00000589158 PDS5BQ9NTI5 1447 aa25.66■■□□□ 1.7
CLPTM1-210ENST00000589158 CUX2O14529 1486 aa25.57■■□□□ 1.68
CLPTM1-210ENST00000589158 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
CLPTM1-210ENST00000589158 CFTRP13569 1480 aa25.53■■□□□ 1.68
CLPTM1-210ENST00000589158 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
CLPTM1-210ENST00000589158 SUPT5HO00267 1087 aaKnown RBP25.46■■□□□ 1.67
CLPTM1-210ENST00000589158 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
CLPTM1-210ENST00000589158 FANCD2Q9BXW9 1451 aa25.43■■□□□ 1.66
CLPTM1-210ENST00000589158 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
CLPTM1-210ENST00000589158 MRC2Q9UBG0 1479 aa25.38■■□□□ 1.65
CLPTM1-210ENST00000589158 WDR62O43379 1518 aa25.27■■□□□ 1.64
CLPTM1-210ENST00000589158 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
CLPTM1-210ENST00000589158 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
CLPTM1-210ENST00000589158 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
CLPTM1-210ENST00000589158 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
CLPTM1-210ENST00000589158 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
CLPTM1-210ENST00000589158 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
CLPTM1-210ENST00000589158 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
CLPTM1-210ENST00000589158 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
CLPTM1-210ENST00000589158 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
CLPTM1-210ENST00000589158 CUX1P39880 1505 aa24.76■■□□□ 1.55
CLPTM1-210ENST00000589158 SOGA1O94964 1423 aa24.72■■□□□ 1.55
CLPTM1-210ENST00000589158 FGD5Q6ZNL6 1462 aa24.71■■□□□ 1.55
CLPTM1-210ENST00000589158 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.55
CLPTM1-210ENST00000589158 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
CLPTM1-210ENST00000589158 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.547e-8■■■■□ 24.6
CLPTM1-210ENST00000589158 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
CLPTM1-210ENST00000589158 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
CLPTM1-210ENST00000589158 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
CLPTM1-210ENST00000589158 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
CLPTM1-210ENST00000589158 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
CLPTM1-210ENST00000589158 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
CLPTM1-210ENST00000589158 FBLN2P98095 1184 aa24.47■■□□□ 1.51
CLPTM1-210ENST00000589158 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
CLPTM1-210ENST00000589158 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
CLPTM1-210ENST00000589158 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
CLPTM1-210ENST00000589158 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
CLPTM1-210ENST00000589158 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
CLPTM1-210ENST00000589158 SNAPC4Q5SXM2 1469 aa24.4■■□□□ 1.5
CLPTM1-210ENST00000589158 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
CLPTM1-210ENST00000589158 MAGI1Q96QZ7 1491 aaPredicted RBP24.33■■□□□ 1.49
CLPTM1-210ENST00000589158 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
CLPTM1-210ENST00000589158 CHD1O14646 1710 aa24.29■■□□□ 1.48
CLPTM1-210ENST00000589158 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
CLPTM1-210ENST00000589158 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
CLPTM1-210ENST00000589158 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
CLPTM1-210ENST00000589158 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
CLPTM1-210ENST00000589158 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
CLPTM1-210ENST00000589158 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
CLPTM1-210ENST00000589158 KIF27Q86VH2 1401 aa24.1■■□□□ 1.45
CLPTM1-210ENST00000589158 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
CLPTM1-210ENST00000589158 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
CLPTM1-210ENST00000589158 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
CLPTM1-210ENST00000589158 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
CLPTM1-210ENST00000589158 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
CLPTM1-210ENST00000589158 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
CLPTM1-210ENST00000589158 IGF1RP08069 1367 aa24.03■■□□□ 1.44
CLPTM1-210ENST00000589158 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
CLPTM1-210ENST00000589158 NUP160Q12769 1436 aa23.97■■□□□ 1.43
CLPTM1-210ENST00000589158 CEP170Q5SW79 1584 aa23.95■■□□□ 1.42
CLPTM1-210ENST00000589158 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
CLPTM1-210ENST00000589158 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
CLPTM1-210ENST00000589158 CUL7Q14999 1698 aa23.88■■□□□ 1.41
CLPTM1-210ENST00000589158 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
CLPTM1-210ENST00000589158 JPH4Q96JJ6 628 aa23.8■■□□□ 1.4
CLPTM1-210ENST00000589158 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms