RNA–Protein interactions for RNA: ENST00000589144.5

SUGP1-210, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 1 (best)

Gene SUGP1, Length 2,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-210ENST00000589144 NISCHQ9Y2I1 1504 aa32.55■■■□□ 2.8
SUGP1-210ENST00000589144 PELP1Q8IZL8 1130 aaKnown RBP28.84■■■□□ 2.21
SUGP1-210ENST00000589144 MYT1Q01538 1121 aa28.16■■■□□ 2.1
SUGP1-210ENST00000589144 HRCP23327 699 aa27.98■■■□□ 2.07
SUGP1-210ENST00000589144 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
SUGP1-210ENST00000589144 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
SUGP1-210ENST00000589144 SHROOM4Q9ULL8 1493 aa27.42■■□□□ 1.98
SUGP1-210ENST00000589144 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
SUGP1-210ENST00000589144 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
SUGP1-210ENST00000589144 TTBK1Q5TCY1 1321 aaPredicted RBP26.89■■□□□ 1.89
SUGP1-210ENST00000589144 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
SUGP1-210ENST00000589144 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
SUGP1-210ENST00000589144 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
SUGP1-210ENST00000589144 PCGF6Q9BYE7 350 aa26.52■■□□□ 1.84
SUGP1-210ENST00000589144 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
SUGP1-210ENST00000589144 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
SUGP1-210ENST00000589144 ZEB1P37275 1124 aaPredicted RBP26.03■■□□□ 1.76
SUGP1-210ENST00000589144 ACIN1Q9UKV3 1341 aaKnown RBP26.02■■□□□ 1.76
SUGP1-210ENST00000589144 ABCC9O60706 1549 aa25.98■■□□□ 1.75
SUGP1-210ENST00000589144 SCRIBQ14160 1630 aa25.89■■□□□ 1.74
SUGP1-210ENST00000589144 BCL11AQ9H165 835 aa25.76■■□□□ 1.71
SUGP1-210ENST00000589144 NEUROD1Q13562 356 aa25.75■■□□□ 1.71
SUGP1-210ENST00000589144 NACADO15069 1562 aa25.73■■□□□ 1.71
SUGP1-210ENST00000589144 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
SUGP1-210ENST00000589144 GTF3C3Q9Y5Q9 886 aa25.68■■□□□ 1.7
SUGP1-210ENST00000589144 CENPBP07199 599 aaPredicted RBP25.67■■□□□ 1.7
SUGP1-210ENST00000589144 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
SUGP1-210ENST00000589144 PRKCSHP14314 528 aaPredicted RBP25.6■■□□□ 1.69
SUGP1-210ENST00000589144 FAM9AQ8IZU1 332 aaPredicted RBP25.49■■□□□ 1.67
SUGP1-210ENST00000589144 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
SUGP1-210ENST00000589144 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
SUGP1-210ENST00000589144 LOC105371045A0A1W2PR82 267 aa25.26■■□□□ 1.63
SUGP1-210ENST00000589144 ERICH6Q7L0X2 663 aa25.25■■□□□ 1.63
SUGP1-210ENST00000589144 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
SUGP1-210ENST00000589144 ANP32EQ9BTT0 268 aa25.17■■□□□ 1.62
SUGP1-210ENST00000589144 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
SUGP1-210ENST00000589144 APLP2Q06481 763 aa25.11■■□□□ 1.61
SUGP1-210ENST00000589144 WIZO95785 1651 aa25.09■■□□□ 1.61
SUGP1-210ENST00000589144 BAZ1AQ9NRL2 1556 aaPredicted RBP25.05■■□□□ 1.6
SUGP1-210ENST00000589144 DIEXFQ68CQ4 756 aaKnown RBP24.89■■□□□ 1.57
SUGP1-210ENST00000589144 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
SUGP1-210ENST00000589144 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
SUGP1-210ENST00000589144 EIF4G1Q04637 1599 aaKnown RBP24.8■■□□□ 1.56
SUGP1-210ENST00000589144 TOP2AP11388 1531 aaKnown RBP24.79■■□□□ 1.56
SUGP1-210ENST00000589144 CSRNP3Q8WYN3 585 aa24.77■■□□□ 1.56
SUGP1-210ENST00000589144 CLSPNQ9HAW4 1339 aa24.67■■□□□ 1.54
SUGP1-210ENST00000589144 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
SUGP1-210ENST00000589144 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
SUGP1-210ENST00000589144 BICRAQ9NZM4 1560 aa24.56■■□□□ 1.52
SUGP1-210ENST00000589144 TSHZ2Q9NRE2 1034 aa24.52■■□□□ 1.52
SUGP1-210ENST00000589144 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
SUGP1-210ENST00000589144 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
SUGP1-210ENST00000589144 PEG3Q9GZU2 1588 aa24.43■■□□□ 1.5
SUGP1-210ENST00000589144 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.52e-6■■□□□ 13.9
SUGP1-210ENST00000589144 SUPT16HQ9Y5B9 1047 aaKnown RBP24.32■■□□□ 1.48
SUGP1-210ENST00000589144 ZNF316A6NFI3 1004 aaPredicted RBP24.25■■□□□ 1.47
SUGP1-210ENST00000589144 CCER1Q8TC90 406 aaPredicted RBP24.24■■□□□ 1.47
SUGP1-210ENST00000589144 YTHDC1Q96MU7 727 aaKnown RBP24.24■■□□□ 1.47
SUGP1-210ENST00000589144 EEA1Q15075 1411 aa24.24■■□□□ 1.47
SUGP1-210ENST00000589144 SOGA1O94964 1423 aa24.2■■□□□ 1.46
SUGP1-210ENST00000589144 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
SUGP1-210ENST00000589144 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
SUGP1-210ENST00000589144 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
SUGP1-210ENST00000589144 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
SUGP1-210ENST00000589144 TNIKQ9UKE5 1360 aa24.11■■□□□ 1.45
SUGP1-210ENST00000589144 MIER1Q8N108 512 aa24.1■■□□□ 1.45
SUGP1-210ENST00000589144 CEP162Q5TB80 1403 aa24.1■■□□□ 1.45
SUGP1-210ENST00000589144 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
SUGP1-210ENST00000589144 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
SUGP1-210ENST00000589144 GOLGA3Q08378 1498 aa24■■□□□ 1.43
SUGP1-210ENST00000589144 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
SUGP1-210ENST00000589144 UBTFP17480 764 aaKnown RBP23.92■■□□□ 1.42
SUGP1-210ENST00000589144 ANO8Q9HCE9 1232 aaPredicted RBP23.91■■□□□ 1.42
SUGP1-210ENST00000589144 UBE2Q2Q8WVN8 375 aa23.9■■□□□ 1.42
SUGP1-210ENST00000589144 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
SUGP1-210ENST00000589144 KIF21BO75037 1637 aa23.89■■□□□ 1.42
SUGP1-210ENST00000589144 ERICH6BQ5W0A0 696 aa23.81■■□□□ 1.4
SUGP1-210ENST00000589144 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
SUGP1-210ENST00000589144 RBM19Q9Y4C8 960 aaKnown RBP23.8■■□□□ 1.4
SUGP1-210ENST00000589144 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
SUGP1-210ENST00000589144 NCAPD3P42695 1498 aa23.76■■□□□ 1.39
SUGP1-210ENST00000589144 BIVM-ERCC5R4GMW8 1640 aa23.72■■□□□ 1.39
SUGP1-210ENST00000589144 MSH5O43196 834 aa23.71■■□□□ 1.39
SUGP1-210ENST00000589144 CLIP1P30622 1438 aa23.68■■□□□ 1.38
SUGP1-210ENST00000589144 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
SUGP1-210ENST00000589144 FANCIQ9NVI1 1328 aa23.64■■□□□ 1.38
SUGP1-210ENST00000589144 VPS8Q8N3P4 1428 aa23.6■■□□□ 1.37
SUGP1-210ENST00000589144 DEKP35659 375 aaKnown RBP23.58■■□□□ 1.36
SUGP1-210ENST00000589144 SALL2Q9Y467 1007 aaPredicted RBP23.56■■□□□ 1.36
SUGP1-210ENST00000589144 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
SUGP1-210ENST00000589144 CFTRP13569 1480 aa23.54■■□□□ 1.36
SUGP1-210ENST00000589144 CUX1P39880 1505 aa23.52■■□□□ 1.36
SUGP1-210ENST00000589144 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
SUGP1-210ENST00000589144 SLC24A1O60721 1099 aa23.5■■□□□ 1.35
SUGP1-210ENST00000589144 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
SUGP1-210ENST00000589144 EIF5BO60841 1220 aaKnown RBP23.43■■□□□ 1.34
SUGP1-210ENST00000589144 DNAJC5BQ9UF47 199 aa23.43■■□□□ 1.34
SUGP1-210ENST00000589144 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
SUGP1-210ENST00000589144 RANGAP1P46060 587 aaPredicted RBP23.33■■□□□ 1.33
SUGP1-210ENST00000589144 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 456.9 ms