RNA–Protein interactions for RNA: ENST00000589012.5

PALM-206, Transcript of paralemmin, humanhuman

TSL 3

Gene PALM, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-206ENST00000589012 NISCHQ9Y2I1 1504 aa44.65■■■■■ 4.74
PALM-206ENST00000589012 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
PALM-206ENST00000589012 ABCC9O60706 1549 aa39.29■■■■□ 3.88
PALM-206ENST00000589012 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
PALM-206ENST00000589012 DCAF8L2P0C7V8 631 aa37.56■■■■□ 3.6
PALM-206ENST00000589012 NACADO15069 1562 aa37.48■■■■□ 3.59
PALM-206ENST00000589012 ZCCHC6Q5VYS8 1495 aaKnown RBP37.14■■■■□ 3.54
PALM-206ENST00000589012 MYO15BQ96JP2 1530 aa37.13■■■■□ 3.53
PALM-206ENST00000589012 DCAF1Q9Y4B6 1507 aa36.89■■■■□ 3.5
PALM-206ENST00000589012 PABPN1Q86U42 306 aaKnown RBP eCLIP36.71■■■■□ 3.47
PALM-206ENST00000589012 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
PALM-206ENST00000589012 BICRAQ9NZM4 1560 aa36.47■■■■□ 3.43
PALM-206ENST00000589012 SCRIBQ14160 1630 aa36.34■■■■□ 3.41
PALM-206ENST00000589012 DNAJC5BQ9UF47 199 aa36.32■■■■□ 3.4
PALM-206ENST00000589012 SHROOM4Q9ULL8 1493 aa36.03■■■■□ 3.36
PALM-206ENST00000589012 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
PALM-206ENST00000589012 CC2D2AQ9P2K1 1620 aa35.46■■■■□ 3.27
PALM-206ENST00000589012 CECR2Q9BXF3 1484 aa35.32■■■■□ 3.24
PALM-206ENST00000589012 SMARCA4P51532 1647 aa34.7■■■■□ 3.14
PALM-206ENST00000589012 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
PALM-206ENST00000589012 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
PALM-206ENST00000589012 ATAD2BQ9ULI0 1458 aa34.61■■■■□ 3.13
PALM-206ENST00000589012 SMARCA2P51531 1590 aa34.53■■■■□ 3.12
PALM-206ENST00000589012 MROH2BQ7Z745 1585 aa34.44■■■■□ 3.1
PALM-206ENST00000589012 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
PALM-206ENST00000589012 PEG3Q9GZU2 1588 aa34.33■■■■□ 3.09
PALM-206ENST00000589012 BAZ1BQ9UIG0 1483 aaKnown RBP34.33■■■■□ 3.09
PALM-206ENST00000589012 WIZO95785 1651 aa34.03■■■■□ 3.04
PALM-206ENST00000589012 RSF1Q96T23 1441 aaPredicted RBP33.96■■■■□ 3.03
PALM-206ENST00000589012 NESP48681 1621 aa33.91■■■■□ 3.02
PALM-206ENST00000589012 ERCC6Q03468 1493 aa33.89■■■■□ 3.02
PALM-206ENST00000589012 LAMC3Q9Y6N6 1575 aa33.72■■■□□ 2.99
PALM-206ENST00000589012 TOP2AP11388 1531 aaKnown RBP33.65■■■□□ 2.98
PALM-206ENST00000589012 CADPSQ9ULU8 1353 aa33.61■■■□□ 2.97
PALM-206ENST00000589012 CUX2O14529 1486 aa33.56■■■□□ 2.96
PALM-206ENST00000589012 PDS5BQ9NTI5 1447 aa33.54■■■□□ 2.96
PALM-206ENST00000589012 KIF21AQ7Z4S6 1674 aa33.43■■■□□ 2.94
PALM-206ENST00000589012 THOC2Q8NI27 1593 aaKnown RBP33.39■■■□□ 2.94
PALM-206ENST00000589012 CFTRP13569 1480 aa33.34■■■□□ 2.93
PALM-206ENST00000589012 CCDC88BA6NC98 1476 aa33.29■■■□□ 2.92
PALM-206ENST00000589012 FANCD2Q9BXW9 1451 aa33.24■■■□□ 2.91
PALM-206ENST00000589012 MRC2Q9UBG0 1479 aa33.22■■■□□ 2.91
PALM-206ENST00000589012 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
PALM-206ENST00000589012 WDR62O43379 1518 aa33.09■■■□□ 2.89
PALM-206ENST00000589012 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
PALM-206ENST00000589012 PRDM2Q13029 1718 aa32.96■■■□□ 2.87
PALM-206ENST00000589012 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
PALM-206ENST00000589012 DNAJC5Q9H3Z4 198 aa32.9■■■□□ 2.86
PALM-206ENST00000589012 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
PALM-206ENST00000589012 ABCC8Q09428 1581 aa32.61■■■□□ 2.81
PALM-206ENST00000589012 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
PALM-206ENST00000589012 IFT140Q96RY7 1462 aa32.52■■■□□ 2.8
PALM-206ENST00000589012 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
PALM-206ENST00000589012 POLA1P09884 1462 aaPredicted RBP32.37■■■□□ 2.77
PALM-206ENST00000589012 CUX1P39880 1505 aa32.31■■■□□ 2.76
PALM-206ENST00000589012 TARBP1Q13395 1621 aaKnown RBP32.29■■■□□ 2.76
PALM-206ENST00000589012 FGD5Q6ZNL6 1462 aa32.27■■■□□ 2.76
PALM-206ENST00000589012 RAD54L2Q9Y4B4 1467 aa32.27■■■□□ 2.76
PALM-206ENST00000589012 SOGA1O94964 1423 aa32.26■■■□□ 2.75
PALM-206ENST00000589012 EIF4G3O43432 1585 aaKnown RBP32.24■■■□□ 2.75
PALM-206ENST00000589012 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.757e-6■■□□□ 13.1
PALM-206ENST00000589012 OSCARQ8IYS5 282 aa32.18■■■□□ 2.74
PALM-206ENST00000589012 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
PALM-206ENST00000589012 WRNQ14191 1432 aaPredicted RBP eCLIP32.03■■■□□ 2.72
PALM-206ENST00000589012 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
PALM-206ENST00000589012 FBLN2P98095 1184 aa31.95■■■□□ 2.71
PALM-206ENST00000589012 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
PALM-206ENST00000589012 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
PALM-206ENST00000589012 ABCA10Q8WWZ4 1543 aa31.91■■■□□ 2.7
PALM-206ENST00000589012 BIVM-ERCC5R4GMW8 1640 aa31.91■■■□□ 2.7
PALM-206ENST00000589012 SNAPC4Q5SXM2 1469 aa31.91■■■□□ 2.7
PALM-206ENST00000589012 GRIN2BQ13224 1484 aa31.9■■■□□ 2.7
PALM-206ENST00000589012 CHD1O14646 1710 aa31.86■■■□□ 2.69
PALM-206ENST00000589012 GAPVD1Q14C86 1478 aa31.86■■■□□ 2.69
PALM-206ENST00000589012 MAGI1Q96QZ7 1491 aaPredicted RBP31.82■■■□□ 2.68
PALM-206ENST00000589012 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
PALM-206ENST00000589012 CHMP7Q8WUX9 453 aaPredicted RBP31.78■■■□□ 2.68
PALM-206ENST00000589012 TRIM41Q8WV44 630 aa31.78■■■□□ 2.68
PALM-206ENST00000589012 PBRM1Q86U86 1689 aa31.75■■■□□ 2.67
PALM-206ENST00000589012 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
PALM-206ENST00000589012 RIMBP3CA6NJZ7 1639 aa31.64■■■□□ 2.66
PALM-206ENST00000589012 RIMBP3BA6NNM3 1639 aa31.64■■■□□ 2.66
PALM-206ENST00000589012 RIMBP3Q9UFD9 1639 aa31.64■■■□□ 2.66
PALM-206ENST00000589012 ARHGEF11O15085 1522 aa31.64■■■□□ 2.66
PALM-206ENST00000589012 CLASP1Q7Z460 1538 aa31.54■■■□□ 2.64
PALM-206ENST00000589012 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
PALM-206ENST00000589012 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
PALM-206ENST00000589012 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
PALM-206ENST00000589012 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
PALM-206ENST00000589012 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
PALM-206ENST00000589012 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
PALM-206ENST00000589012 ARAP1Q96P48 1450 aa31.37■■■□□ 2.61
PALM-206ENST00000589012 NUP160Q12769 1436 aa31.34■■■□□ 2.61
PALM-206ENST00000589012 CEP170Q5SW79 1584 aa31.32■■■□□ 2.6
PALM-206ENST00000589012 IGF1RP08069 1367 aa31.3■■■□□ 2.6
PALM-206ENST00000589012 CUL7Q14999 1698 aa31.15■■■□□ 2.58
PALM-206ENST00000589012 ERCC6L2Q5T890 1561 aa31.11■■■□□ 2.57
PALM-206ENST00000589012 CARMIL1Q5VZK9 1371 aa31.11■■■□□ 2.57
PALM-206ENST00000589012 SHROOM2Q13796 1616 aa31.09■■■□□ 2.57
PALM-206ENST00000589012 JPH4Q96JJ6 628 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms