RNA–Protein interactions for RNA: ENST00000586802.5

HDAC5-204, Transcript of histone deacetylase 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HDAC5, Length 3,662 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-204ENST00000586802 NISCHQ9Y2I1 1504 aa23.71■■□□□ 1.39
HDAC5-204ENST00000586802 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
HDAC5-204ENST00000586802 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
HDAC5-204ENST00000586802 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
HDAC5-204ENST00000586802 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
HDAC5-204ENST00000586802 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.69
HDAC5-204ENST00000586802 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
HDAC5-204ENST00000586802 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
HDAC5-204ENST00000586802 HRCP23327 699 aa19.21■□□□□ 0.67
HDAC5-204ENST00000586802 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
HDAC5-204ENST00000586802 PCGF6Q9BYE7 350 aa19.13■□□□□ 0.65
HDAC5-204ENST00000586802 ABCC9O60706 1549 aa19.08■□□□□ 0.64
HDAC5-204ENST00000586802 NACADO15069 1562 aa19.02■□□□□ 0.64
HDAC5-204ENST00000586802 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
HDAC5-204ENST00000586802 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
HDAC5-204ENST00000586802 MYT1Q01538 1121 aa18.86■□□□□ 0.61
HDAC5-204ENST00000586802 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
HDAC5-204ENST00000586802 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
HDAC5-204ENST00000586802 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
HDAC5-204ENST00000586802 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
HDAC5-204ENST00000586802 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
HDAC5-204ENST00000586802 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
HDAC5-204ENST00000586802 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
HDAC5-204ENST00000586802 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
HDAC5-204ENST00000586802 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-204ENST00000586802 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
HDAC5-204ENST00000586802 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
HDAC5-204ENST00000586802 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
HDAC5-204ENST00000586802 WIZO95785 1651 aa18.18■□□□□ 0.5
HDAC5-204ENST00000586802 TRIM26Q12899 539 aaPredicted RBP18.17■□□□□ 0.5
HDAC5-204ENST00000586802 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
HDAC5-204ENST00000586802 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
HDAC5-204ENST00000586802 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.48
HDAC5-204ENST00000586802 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
HDAC5-204ENST00000586802 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
HDAC5-204ENST00000586802 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
HDAC5-204ENST00000586802 NEUROD1Q13562 356 aa17.87■□□□□ 0.45
HDAC5-204ENST00000586802 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
HDAC5-204ENST00000586802 PRDM2Q13029 1718 aa17.83■□□□□ 0.45
HDAC5-204ENST00000586802 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
HDAC5-204ENST00000586802 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
HDAC5-204ENST00000586802 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
HDAC5-204ENST00000586802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
HDAC5-204ENST00000586802 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
HDAC5-204ENST00000586802 CCER1Q8TC90 406 aaPredicted RBP17.64■□□□□ 0.41
HDAC5-204ENST00000586802 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
HDAC5-204ENST00000586802 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
HDAC5-204ENST00000586802 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
HDAC5-204ENST00000586802 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
HDAC5-204ENST00000586802 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
HDAC5-204ENST00000586802 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
HDAC5-204ENST00000586802 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
HDAC5-204ENST00000586802 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
HDAC5-204ENST00000586802 SYNJ1O43426 1573 aa17.39■□□□□ 0.37
HDAC5-204ENST00000586802 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
HDAC5-204ENST00000586802 KIF21BO75037 1637 aa17.31■□□□□ 0.36
HDAC5-204ENST00000586802 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
HDAC5-204ENST00000586802 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.35
HDAC5-204ENST00000586802 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
HDAC5-204ENST00000586802 CFTRP13569 1480 aa17.19■□□□□ 0.34
HDAC5-204ENST00000586802 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
HDAC5-204ENST00000586802 MIER1Q8N108 512 aa17.14■□□□□ 0.33
HDAC5-204ENST00000586802 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
HDAC5-204ENST00000586802 ERICH6Q7L0X2 663 aa17.11■□□□□ 0.33
HDAC5-204ENST00000586802 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-204ENST00000586802 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
HDAC5-204ENST00000586802 EEA1Q15075 1411 aa17.08■□□□□ 0.33
HDAC5-204ENST00000586802 CUX1P39880 1505 aa17.08■□□□□ 0.33
HDAC5-204ENST00000586802 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
HDAC5-204ENST00000586802 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.31
HDAC5-204ENST00000586802 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
HDAC5-204ENST00000586802 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
HDAC5-204ENST00000586802 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
HDAC5-204ENST00000586802 SOGA1O94964 1423 aa16.91■□□□□ 0.3
HDAC5-204ENST00000586802 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
HDAC5-204ENST00000586802 BCANQ96GW7 911 aa16.85■□□□□ 0.29
HDAC5-204ENST00000586802 ABCA5Q8WWZ7 1642 aa16.84■□□□□ 0.29
HDAC5-204ENST00000586802 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
HDAC5-204ENST00000586802 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
HDAC5-204ENST00000586802 RANGAP1P46060 587 aaPredicted RBP16.82■□□□□ 0.28
HDAC5-204ENST00000586802 DNMBPQ6XZF7 1577 aa16.8■□□□□ 0.28
HDAC5-204ENST00000586802 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.284e-8■■□□□ 11.4
HDAC5-204ENST00000586802 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
HDAC5-204ENST00000586802 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
HDAC5-204ENST00000586802 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
HDAC5-204ENST00000586802 TSHZ2Q9NRE2 1034 aa16.76■□□□□ 0.27
HDAC5-204ENST00000586802 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
HDAC5-204ENST00000586802 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
HDAC5-204ENST00000586802 CEP164Q9UPV0 1460 aa16.72■□□□□ 0.27
HDAC5-204ENST00000586802 CUL7Q14999 1698 aa16.68■□□□□ 0.26
HDAC5-204ENST00000586802 CTTNBP2Q8WZ74 1663 aa16.68■□□□□ 0.26
HDAC5-204ENST00000586802 ABCA10Q8WWZ4 1543 aa16.68■□□□□ 0.26
HDAC5-204ENST00000586802 LRRIQ1Q96JM4 1722 aa16.68■□□□□ 0.26
HDAC5-204ENST00000586802 CADPSQ9ULU8 1353 aa16.65■□□□□ 0.26
HDAC5-204ENST00000586802 CFAP43Q8NDM7 1665 aa16.65■□□□□ 0.26
HDAC5-204ENST00000586802 MAP3K1Q13233 1512 aa16.64■□□□□ 0.25
HDAC5-204ENST00000586802 ARAP1Q96P48 1450 aa16.63■□□□□ 0.25
HDAC5-204ENST00000586802 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
HDAC5-204ENST00000586802 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
HDAC5-204ENST00000586802 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms