RNA–Protein interactions for RNA: ENST00000586564.5

C19orf25-204, Transcript of chromosome 19 open reading frame 25, human

APPRIS P1 TSL 3 BASIC

Gene C19orf25, Length 1,265 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C19orf25-204	ENST00000586564	NISCH	Q9Y2I1	1504 aa		43.71	■■■■■ 4.59
C19orf25-204	ENST00000586564	CCDC180	Q9P1Z9	1646 aa		38.89	■■■■□ 3.82
C19orf25-204	ENST00000586564	ABCC9	O60706	1549 aa		38.38	■■■■□ 3.73
C19orf25-204	ENST00000586564	DCAF8L2	P0C7V8	631 aa		36.82	■■■■□ 3.48
C19orf25-204	ENST00000586564	RB1CC1	Q8TDY2	1594 aa		36.75	■■■■□ 3.47
C19orf25-204	ENST00000586564	NACAD	O15069	1562 aa		36.64	■■■■□ 3.46
C19orf25-204	ENST00000586564	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.32	■■■■□ 3.41
C19orf25-204	ENST00000586564	MYO15B	Q96JP2	1530 aa		36.3	■■■■□ 3.4
C19orf25-204	ENST00000586564	DCAF1	Q9Y4B6	1507 aa		36.08	■■■■□ 3.37
C19orf25-204	ENST00000586564	DNAJC5B	Q9UF47	199 aa		35.93	■■■■□ 3.34
C19orf25-204	ENST00000586564	UNC13A	Q9UPW8	1703 aa		35.93	■■■■□ 3.34
C19orf25-204	ENST00000586564	PABPN1	Q86U42	306 aa	Known RBP eCLIP	35.9	■■■■□ 3.34
C19orf25-204	ENST00000586564	BICRA	Q9NZM4	1560 aa		35.64	■■■■□ 3.3
C19orf25-204	ENST00000586564	SCRIB	Q14160	1630 aa		35.56	■■■■□ 3.28
C19orf25-204	ENST00000586564	SHROOM4	Q9ULL8	1493 aa		35.16	■■■■□ 3.22
C19orf25-204	ENST00000586564	EIF4G1	Q04637	1599 aa	Known RBP	34.72	■■■■□ 3.15
C19orf25-204	ENST00000586564	CC2D2A	Q9P2K1	1620 aa		34.65	■■■■□ 3.14
C19orf25-204	ENST00000586564	CECR2	Q9BXF3	1484 aa		34.47	■■■■□ 3.11
C19orf25-204	ENST00000586564	SMARCA4	P51532	1647 aa		33.95	■■■■□ 3.03
C19orf25-204	ENST00000586564	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	33.88	■■■■□ 3.01
C19orf25-204	ENST00000586564	NCAPD3	P42695	1498 aa		33.83	■■■■□ 3.01
C19orf25-204	ENST00000586564	ATAD2B	Q9ULI0	1458 aa		33.83	■■■■□ 3.01
C19orf25-204	ENST00000586564	SMARCA2	P51531	1590 aa		33.76	■■■□□ 2.99
C19orf25-204	ENST00000586564	MROH2B	Q7Z745	1585 aa		33.71	■■■□□ 2.99
C19orf25-204	ENST00000586564	HMGXB3	Q12766	1538 aa		33.6	■■■□□ 2.97
C19orf25-204	ENST00000586564	PEG3	Q9GZU2	1588 aa		33.57	■■■□□ 2.96
C19orf25-204	ENST00000586564	BAZ1B	Q9UIG0	1483 aa	Known RBP	33.56	■■■□□ 2.96
C19orf25-204	ENST00000586564	DNAJC5	Q9H3Z4	198 aa		33.45	■■■□□ 2.95
C19orf25-204	ENST00000586564	WIZ	O95785	1651 aa		33.36	■■■□□ 2.93
C19orf25-204	ENST00000586564	RSF1	Q96T23	1441 aa	Predicted RBP	33.26	■■■□□ 2.91
C19orf25-204	ENST00000586564	NES	P48681	1621 aa		33.14	■■■□□ 2.9
C19orf25-204	ENST00000586564	ERCC6	Q03468	1493 aa		33.08	■■■□□ 2.89
C19orf25-204	ENST00000586564	LAMC3	Q9Y6N6	1575 aa		32.96	■■■□□ 2.87
C19orf25-204	ENST00000586564	TOP2A	P11388	1531 aa	Known RBP	32.93	■■■□□ 2.86
C19orf25-204	ENST00000586564	CADPS	Q9ULU8	1353 aa		32.87	■■■□□ 2.85
C19orf25-204	ENST00000586564	PDS5B	Q9NTI5	1447 aa		32.78	■■■□□ 2.84
C19orf25-204	ENST00000586564	CUX2	O14529	1486 aa		32.73	■■■□□ 2.83
C19orf25-204	ENST00000586564	KIF21A	Q7Z4S6	1674 aa		32.71	■■■□□ 2.83
C19orf25-204	ENST00000586564	CCDC88B	A6NC98	1476 aa		32.61	■■■□□ 2.81
C19orf25-204	ENST00000586564	CFTR	P13569	1480 aa		32.6	■■■□□ 2.81
C19orf25-204	ENST00000586564	THOC2	Q8NI27	1593 aa	Known RBP	32.59	■■■□□ 2.81
C19orf25-204	ENST00000586564	FANCD2	Q9BXW9	1451 aa		32.49	■■■□□ 2.79
C19orf25-204	ENST00000586564	CEP164	Q9UPV0	1460 aa		32.45	■■■□□ 2.79
C19orf25-204	ENST00000586564	MRC2	Q9UBG0	1479 aa		32.44	■■■□□ 2.78
C19orf25-204	ENST00000586564	SUPT5H	O00267	1087 aa	Known RBP	32.41	■■■□□ 2.78
C19orf25-204	ENST00000586564	WDR62	O43379	1518 aa		32.31	■■■□□ 2.76
C19orf25-204	ENST00000586564	PRDM2	Q13029	1718 aa		32.3	■■■□□ 2.76
C19orf25-204	ENST00000586564	URB2	Q14146	1524 aa	Known RBP	32.17	■■■□□ 2.74
C19orf25-204	ENST00000586564	TOPBP1	Q92547	1522 aa		31.94	■■■□□ 2.7
C19orf25-204	ENST00000586564	ABCC8	Q09428	1581 aa		31.9	■■■□□ 2.7
C19orf25-204	ENST00000586564	DNMBP	Q6XZF7	1577 aa		31.86	■■■□□ 2.69
C19orf25-204	ENST00000586564	IFT140	Q96RY7	1462 aa		31.78	■■■□□ 2.68
C19orf25-204	ENST00000586564	TRIM41	Q8WV44	630 aa		31.73	■■■□□ 2.67
C19orf25-204	ENST00000586564	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.69	■■■□□ 2.66
C19orf25-204	ENST00000586564	POLA1	P09884	1462 aa	Predicted RBP	31.65	■■■□□ 2.66
C19orf25-204	ENST00000586564	CUX1	P39880	1505 aa		31.62	■■■□□ 2.65
C19orf25-204	ENST00000586564	TARBP1	Q13395	1621 aa	Known RBP	31.58	■■■□□ 2.65
C19orf25-204	ENST00000586564	SOGA1	O94964	1423 aa		31.58	■■■□□ 2.65
C19orf25-204	ENST00000586564	RAD54L2	Q9Y4B4	1467 aa		31.57	■■■□□ 2.64
C19orf25-204	ENST00000586564	FGD5	Q6ZNL6	1462 aa		31.56	■■■□□ 2.64
C19orf25-204	ENST00000586564	AQR	O60306	1485 aa	Known RBP eCLIP	31.51	■■■□□ 2.63	3e-6	■■■■□ 23.2
C19orf25-204	ENST00000586564	EIF4G3	O43432	1585 aa	Known RBP	31.51	■■■□□ 2.63
C19orf25-204	ENST00000586564	OSCAR	Q8IYS5	282 aa		31.46	■■■□□ 2.63
C19orf25-204	ENST00000586564	TDRD9	Q8NDG6	1382 aa	Known RBP	31.44	■■■□□ 2.62
C19orf25-204	ENST00000586564	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.36	■■■□□ 2.61
C19orf25-204	ENST00000586564	SYNJ1	O43426	1573 aa		31.28	■■■□□ 2.6
C19orf25-204	ENST00000586564	TOP2B	Q02880	1626 aa		31.27	■■■□□ 2.6
C19orf25-204	ENST00000586564	BIVM-ERCC5	R4GMW8	1640 aa		31.27	■■■□□ 2.6
C19orf25-204	ENST00000586564	FBLN2	P98095	1184 aa		31.26	■■■□□ 2.59
C19orf25-204	ENST00000586564	WDR97	A6NE52	1622 aa		31.26	■■■□□ 2.59
C19orf25-204	ENST00000586564	ABCA10	Q8WWZ4	1543 aa		31.21	■■■□□ 2.59
C19orf25-204	ENST00000586564	GRIN2B	Q13224	1484 aa		31.18	■■■□□ 2.58
C19orf25-204	ENST00000586564	CHD1	O14646	1710 aa		31.18	■■■□□ 2.58
C19orf25-204	ENST00000586564	GAPVD1	Q14C86	1478 aa		31.17	■■■□□ 2.58
C19orf25-204	ENST00000586564	SNAPC4	Q5SXM2	1469 aa		31.17	■■■□□ 2.58
C19orf25-204	ENST00000586564	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.1	■■■□□ 2.57
C19orf25-204	ENST00000586564	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.09	■■■□□ 2.57
C19orf25-204	ENST00000586564	PBRM1	Q86U86	1689 aa		31.09	■■■□□ 2.57
C19orf25-204	ENST00000586564	ABCA5	Q8WWZ7	1642 aa		31.09	■■■□□ 2.57
C19orf25-204	ENST00000586564	SYNJ2	O15056	1496 aa		30.99	■■■□□ 2.55
C19orf25-204	ENST00000586564	RIMBP3C	A6NJZ7	1639 aa		30.91	■■■□□ 2.54
C19orf25-204	ENST00000586564	RIMBP3B	A6NNM3	1639 aa		30.91	■■■□□ 2.54
C19orf25-204	ENST00000586564	RIMBP3	Q9UFD9	1639 aa		30.91	■■■□□ 2.54
C19orf25-204	ENST00000586564	ARHGEF11	O15085	1522 aa		30.87	■■■□□ 2.53
C19orf25-204	ENST00000586564	ERICH3	Q5RHP9	1530 aa		30.83	■■■□□ 2.53
C19orf25-204	ENST00000586564	ADAMTS12	P58397	1594 aa		30.8	■■■□□ 2.52
C19orf25-204	ENST00000586564	FHAD1	B1AJZ9	1412 aa		30.8	■■■□□ 2.52
C19orf25-204	ENST00000586564	CLASP1	Q7Z460	1538 aa		30.79	■■■□□ 2.52
C19orf25-204	ENST00000586564	GRIN2A	Q12879	1464 aa		30.76	■■■□□ 2.52
C19orf25-204	ENST00000586564	KIF27	Q86VH2	1401 aa		30.73	■■■□□ 2.51
C19orf25-204	ENST00000586564	CYB5RL	Q6IPT4	315 aa		30.71	■■■□□ 2.51
C19orf25-204	ENST00000586564	IGF1R	P08069	1367 aa		30.65	■■■□□ 2.5
C19orf25-204	ENST00000586564	CEP170	Q5SW79	1584 aa		30.62	■■■□□ 2.49
C19orf25-204	ENST00000586564	NUP160	Q12769	1436 aa		30.62	■■■□□ 2.49
C19orf25-204	ENST00000586564	ARAP1	Q96P48	1450 aa		30.61	■■■□□ 2.49
C19orf25-204	ENST00000586564	CUL7	Q14999	1698 aa		30.51	■■■□□ 2.47
C19orf25-204	ENST00000586564	CARMIL1	Q5VZK9	1371 aa		30.47	■■■□□ 2.47
C19orf25-204	ENST00000586564	RUSC2	Q8N2Y8	1516 aa		30.43	■■■□□ 2.46
C19orf25-204	ENST00000586564	ERCC6L2	Q5T890	1561 aa		30.41	■■■□□ 2.46
C19orf25-204	ENST00000586564	JPH4	Q96JJ6	628 aa		30.41	■■■□□ 2.46

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms