RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
CDH8-211ENST00000584337 MYT1Q01538 1121 aa17.34■□□□□ 0.37
CDH8-211ENST00000584337 HRCP23327 699 aa17.16■□□□□ 0.34
CDH8-211ENST00000584337 NISCHQ9Y2I1 1504 aa16.93■□□□□ 0.3
CDH8-211ENST00000584337 PCGF6Q9BYE7 350 aa16.79■□□□□ 0.28
CDH8-211ENST00000584337 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
CDH8-211ENST00000584337 DCAF8L2P0C7V8 631 aa16.71■□□□□ 0.27
CDH8-211ENST00000584337 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
CDH8-211ENST00000584337 SUPT5HO00267 1087 aaKnown RBP16.35■□□□□ 0.21
CDH8-211ENST00000584337 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
CDH8-211ENST00000584337 TTBK1Q5TCY1 1321 aaPredicted RBP16.28■□□□□ 0.2
CDH8-211ENST00000584337 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
CDH8-211ENST00000584337 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
CDH8-211ENST00000584337 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
CDH8-211ENST00000584337 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
CDH8-211ENST00000584337 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
CDH8-211ENST00000584337 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
CDH8-211ENST00000584337 CHIC1Q5VXU3 224 aa15.87■□□□□ 0.13
CDH8-211ENST00000584337 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
CDH8-211ENST00000584337 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
CDH8-211ENST00000584337 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
CDH8-211ENST00000584337 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
CDH8-211ENST00000584337 DIEXFQ68CQ4 756 aaKnown RBP15.65■□□□□ 0.1
CDH8-211ENST00000584337 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
CDH8-211ENST00000584337 CCER1Q8TC90 406 aaPredicted RBP15.59■□□□□ 0.09
CDH8-211ENST00000584337 ERICH6Q7L0X2 663 aa15.57■□□□□ 0.08
CDH8-211ENST00000584337 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
CDH8-211ENST00000584337 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
CDH8-211ENST00000584337 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CDH8-211ENST00000584337 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
CDH8-211ENST00000584337 PRKCSHP14314 528 aaPredicted RBP15.37■□□□□ 0.05
CDH8-211ENST00000584337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
CDH8-211ENST00000584337 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
CDH8-211ENST00000584337 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
CDH8-211ENST00000584337 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
CDH8-211ENST00000584337 TRIM41Q8WV44 630 aa15.06■□□□□ 0
CDH8-211ENST00000584337 MIER1Q8N108 512 aa15.03■□□□□ -0
CDH8-211ENST00000584337 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
CDH8-211ENST00000584337 NEFLP07196 543 aa15.01□□□□□ -0.01
CDH8-211ENST00000584337 SUPT16HQ9Y5B9 1047 aaKnown RBP15□□□□□ -0.01
CDH8-211ENST00000584337 BCANQ96GW7 911 aa14.95□□□□□ -0.02
CDH8-211ENST00000584337 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
CDH8-211ENST00000584337 APLP2Q06481 763 aa14.81□□□□□ -0.04
CDH8-211ENST00000584337 FKBP8Q14318 412 aa14.76□□□□□ -0.05
CDH8-211ENST00000584337 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
CDH8-211ENST00000584337 RANGAP1P46060 587 aaPredicted RBP14.74□□□□□ -0.05
CDH8-211ENST00000584337 DEKP35659 375 aaKnown RBP14.68□□□□□ -0.06
CDH8-211ENST00000584337 RTL5Q5HYW3 569 aaPredicted RBP14.68□□□□□ -0.06
CDH8-211ENST00000584337 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
CDH8-211ENST00000584337 CDK11AQ9UQ88 783 aaPredicted RBP14.67□□□□□ -0.06
CDH8-211ENST00000584337 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
CDH8-211ENST00000584337 ITGAEP38570 1179 aa14.58□□□□□ -0.08
CDH8-211ENST00000584337 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
CDH8-211ENST00000584337 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
CDH8-211ENST00000584337 NBR1Q14596 966 aa14.53□□□□□ -0.08
CDH8-211ENST00000584337 CCDC136Q96JN2 1154 aa14.52□□□□□ -0.08
CDH8-211ENST00000584337 SALL2Q9Y467 1007 aaPredicted RBP14.47□□□□□ -0.09
CDH8-211ENST00000584337 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
CDH8-211ENST00000584337 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
CDH8-211ENST00000584337 FANCIQ9NVI1 1328 aa14.44□□□□□ -0.1
CDH8-211ENST00000584337 UBE2Q2Q8WVN8 375 aa14.4□□□□□ -0.1
CDH8-211ENST00000584337 UBTFP17480 764 aaKnown RBP14.4□□□□□ -0.1
CDH8-211ENST00000584337 MSH5O43196 834 aa14.39□□□□□ -0.11
CDH8-211ENST00000584337 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
CDH8-211ENST00000584337 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
CDH8-211ENST00000584337 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
CDH8-211ENST00000584337 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
CDH8-211ENST00000584337 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
CDH8-211ENST00000584337 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
CDH8-211ENST00000584337 ZBTB47Q9UFB7 747 aaPredicted RBP14.27□□□□□ -0.12
CDH8-211ENST00000584337 ANP32CO43423 234 aa14.26□□□□□ -0.13
CDH8-211ENST00000584337 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
CDH8-211ENST00000584337 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
CDH8-211ENST00000584337 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
CDH8-211ENST00000584337 IL27Q8NEV9 243 aa14.2□□□□□ -0.14
CDH8-211ENST00000584337 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
CDH8-211ENST00000584337 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
CDH8-211ENST00000584337 HNRNPUQ00839 825 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDH8-211ENST00000584337 NEFMP07197 916 aa14.11□□□□□ -0.15
CDH8-211ENST00000584337 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
CDH8-211ENST00000584337 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDH8-211ENST00000584337 CEP162Q5TB80 1403 aa14.09□□□□□ -0.15
CDH8-211ENST00000584337 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
CDH8-211ENST00000584337 ABCC9O60706 1549 aa14.08□□□□□ -0.15
CDH8-211ENST00000584337 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
CDH8-211ENST00000584337 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
CDH8-211ENST00000584337 PODXL2Q9NZ53 605 aa14.04□□□□□ -0.16
CDH8-211ENST00000584337 IPO9Q96P70 1041 aaKnown RBP14.04□□□□□ -0.16
CDH8-211ENST00000584337 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
CDH8-211ENST00000584337 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
CDH8-211ENST00000584337 B4GALNT3Q6L9W6 998 aa14.03□□□□□ -0.16
CDH8-211ENST00000584337 PPM1GO15355 546 aaPredicted RBP14.01□□□□□ -0.17
CDH8-211ENST00000584337 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
CDH8-211ENST00000584337 LAS1LQ9Y4W2 734 aaKnown RBP14.01□□□□□ -0.17
CDH8-211ENST00000584337 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
CDH8-211ENST00000584337 TIMELESSQ9UNS1 1208 aa13.98□□□□□ -0.17
CDH8-211ENST00000584337 USP35Q9P2H5 1018 aa13.97□□□□□ -0.17
CDH8-211ENST00000584337 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
CDH8-211ENST00000584337 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
CDH8-211ENST00000584337 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms