RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
CLTC-213ENST00000584313 CCDC180Q9P1Z9 1646 aa31.26■■■□□ 2.59
CLTC-213ENST00000584313 ABCC9O60706 1549 aa30.87■■■□□ 2.53
CLTC-213ENST00000584313 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
CLTC-213ENST00000584313 DCAF8L2P0C7V8 631 aa29.53■■■□□ 2.32
CLTC-213ENST00000584313 NACADO15069 1562 aa29.5■■■□□ 2.31
CLTC-213ENST00000584313 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
CLTC-213ENST00000584313 ZCCHC6Q5VYS8 1495 aaKnown RBP29.24■■■□□ 2.27
CLTC-213ENST00000584313 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
CLTC-213ENST00000584313 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
CLTC-213ENST00000584313 UNC13AQ9UPW8 1703 aa28.78■■■□□ 2.2
CLTC-213ENST00000584313 BICRAQ9NZM4 1560 aa28.69■■■□□ 2.18
CLTC-213ENST00000584313 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
CLTC-213ENST00000584313 DNAJC5BQ9UF47 199 aa28.56■■■□□ 2.16
CLTC-213ENST00000584313 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
CLTC-213ENST00000584313 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
CLTC-213ENST00000584313 CC2D2AQ9P2K1 1620 aa27.87■■■□□ 2.05
CLTC-213ENST00000584313 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
CLTC-213ENST00000584313 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
CLTC-213ENST00000584313 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
CLTC-213ENST00000584313 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
CLTC-213ENST00000584313 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
CLTC-213ENST00000584313 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
CLTC-213ENST00000584313 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
CLTC-213ENST00000584313 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
CLTC-213ENST00000584313 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
CLTC-213ENST00000584313 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
CLTC-213ENST00000584313 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
CLTC-213ENST00000584313 WIZO95785 1651 aa26.75■■□□□ 1.87
CLTC-213ENST00000584313 NESP48681 1621 aa26.65■■□□□ 1.86
CLTC-213ENST00000584313 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
CLTC-213ENST00000584313 LAMC3Q9Y6N6 1575 aa26.51■■□□□ 1.83
CLTC-213ENST00000584313 TOP2AP11388 1531 aaKnown RBP26.49■■□□□ 1.83
CLTC-213ENST00000584313 CADPSQ9ULU8 1353 aa26.47■■□□□ 1.83
CLTC-213ENST00000584313 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
CLTC-213ENST00000584313 CUX2O14529 1486 aa26.39■■□□□ 1.82
CLTC-213ENST00000584313 CFTRP13569 1480 aa26.26■■□□□ 1.79
CLTC-213ENST00000584313 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
CLTC-213ENST00000584313 THOC2Q8NI27 1593 aaKnown RBP26.24■■□□□ 1.79
CLTC-213ENST00000584313 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
CLTC-213ENST00000584313 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
CLTC-213ENST00000584313 MRC2Q9UBG0 1479 aa26.13■■□□□ 1.77
CLTC-213ENST00000584313 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
CLTC-213ENST00000584313 WDR62O43379 1518 aa26.03■■□□□ 1.76
CLTC-213ENST00000584313 SUPT5HO00267 1087 aaKnown RBP25.96■■□□□ 1.75
CLTC-213ENST00000584313 URB2Q14146 1524 aaKnown RBP25.89■■□□□ 1.74
CLTC-213ENST00000584313 DNAJC5Q9H3Z4 198 aa25.87■■□□□ 1.73
CLTC-213ENST00000584313 PRDM2Q13029 1718 aa25.87■■□□□ 1.73
CLTC-213ENST00000584313 TOPBP1Q92547 1522 aa25.69■■□□□ 1.7
CLTC-213ENST00000584313 ABCC8Q09428 1581 aa25.68■■□□□ 1.7
CLTC-213ENST00000584313 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
CLTC-213ENST00000584313 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
CLTC-213ENST00000584313 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
CLTC-213ENST00000584313 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
CLTC-213ENST00000584313 CUX1P39880 1505 aa25.43■■□□□ 1.66
CLTC-213ENST00000584313 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
CLTC-213ENST00000584313 SOGA1O94964 1423 aa25.38■■□□□ 1.65
CLTC-213ENST00000584313 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
CLTC-213ENST00000584313 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
CLTC-213ENST00000584313 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.657e-10■■■■■ 39.6
CLTC-213ENST00000584313 EIF4G3O43432 1585 aaKnown RBP25.33■■□□□ 1.65
CLTC-213ENST00000584313 OSCARQ8IYS5 282 aa25.32■■□□□ 1.64
CLTC-213ENST00000584313 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
CLTC-213ENST00000584313 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
CLTC-213ENST00000584313 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
CLTC-213ENST00000584313 TOP2BQ02880 1626 aa25.13■■□□□ 1.61
CLTC-213ENST00000584313 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
CLTC-213ENST00000584313 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
CLTC-213ENST00000584313 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
CLTC-213ENST00000584313 FBLN2P98095 1184 aa25.1■■□□□ 1.61
CLTC-213ENST00000584313 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
CLTC-213ENST00000584313 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
CLTC-213ENST00000584313 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.6
CLTC-213ENST00000584313 MAGI1Q96QZ7 1491 aaPredicted RBP25.03■■□□□ 1.6
CLTC-213ENST00000584313 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
CLTC-213ENST00000584313 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
CLTC-213ENST00000584313 CHD1O14646 1710 aa25■■□□□ 1.59
CLTC-213ENST00000584313 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
CLTC-213ENST00000584313 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
CLTC-213ENST00000584313 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
CLTC-213ENST00000584313 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
CLTC-213ENST00000584313 RIMBP3CA6NJZ7 1639 aa24.85■■□□□ 1.57
CLTC-213ENST00000584313 RIMBP3BA6NNM3 1639 aa24.85■■□□□ 1.57
CLTC-213ENST00000584313 RIMBP3Q9UFD9 1639 aa24.85■■□□□ 1.57
CLTC-213ENST00000584313 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
CLTC-213ENST00000584313 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
CLTC-213ENST00000584313 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
CLTC-213ENST00000584313 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
CLTC-213ENST00000584313 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
CLTC-213ENST00000584313 KIF27Q86VH2 1401 aa24.71■■□□□ 1.55
CLTC-213ENST00000584313 CYB5RLQ6IPT4 315 aa24.7■■□□□ 1.54
CLTC-213ENST00000584313 NUP160Q12769 1436 aa24.68■■□□□ 1.54
CLTC-213ENST00000584313 ARAP1Q96P48 1450 aa24.66■■□□□ 1.54
CLTC-213ENST00000584313 IGF1RP08069 1367 aa24.66■■□□□ 1.54
CLTC-213ENST00000584313 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
CLTC-213ENST00000584313 CARMIL1Q5VZK9 1371 aa24.5■■□□□ 1.51
CLTC-213ENST00000584313 CUL7Q14999 1698 aa24.5■■□□□ 1.51
CLTC-213ENST00000584313 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
CLTC-213ENST00000584313 JPH4Q96JJ6 628 aa24.45■■□□□ 1.5
CLTC-213ENST00000584313 SHROOM2Q13796 1616 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms