RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-225ENST00000584155 AEBP2Q6ZN18 517 aaPredicted RBP16.08■□□□□ 0.16
NUP85-225ENST00000584155 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
NUP85-225ENST00000584155 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
NUP85-225ENST00000584155 PHF23Q9BUL5 403 aaPredicted RBP13.48□□□□□ -0.25
NUP85-225ENST00000584155 FOXD1Q16676 465 aa12.89□□□□□ -0.35
NUP85-225ENST00000584155 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
NUP85-225ENST00000584155 MSH5O43196 834 aa12.21□□□□□ -0.45
NUP85-225ENST00000584155 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
NUP85-225ENST00000584155 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
NUP85-225ENST00000584155 ADRA2BP18089 450 aa11.57□□□□□ -0.56
NUP85-225ENST00000584155 PLPPR3Q6T4P5 718 aa11.52□□□□□ -0.57
NUP85-225ENST00000584155 DMRT2Q9Y5R5 561 aa10.83□□□□□ -0.68
NUP85-225ENST00000584155 MAPK8IP2Q13387 824 aaPredicted RBP10.79□□□□□ -0.68
NUP85-225ENST00000584155 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
NUP85-225ENST00000584155 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
NUP85-225ENST00000584155 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
NUP85-225ENST00000584155 DCAF8L1A6NGE4 600 aa10.3□□□□□ -0.76
NUP85-225ENST00000584155 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
NUP85-225ENST00000584155 C1QBPQ07021 282 aaKnown RBP10.2□□□□□ -0.78
NUP85-225ENST00000584155 PPP4R3CPQ6ZMV5 832 aa10.03□□□□□ -0.8
NUP85-225ENST00000584155 RNF216Q9NWF9 866 aaPredicted RBP10.01□□□□□ -0.81
NUP85-225ENST00000584155 DNAJC5BQ9UF47 199 aa10.01□□□□□ -0.81
NUP85-225ENST00000584155 CNKSR2Q8WXI2 1034 aa9.95□□□□□ -0.82
NUP85-225ENST00000584155 POTEHQ6S545 545 aa9.92□□□□□ -0.82
NUP85-225ENST00000584155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.67□□□□□ -0.86
NUP85-225ENST00000584155 DSG3P32926 999 aa9.58□□□□□ -0.88
NUP85-225ENST00000584155 SPINK5Q9NQ38 1064 aaPredicted RBP9.5□□□□□ -0.89
NUP85-225ENST00000584155 U3KPZ7 1027 aaPredicted RBP9.5□□□□□ -0.89
NUP85-225ENST00000584155 NCBP3Q53F19 620 aaKnown RBP9.44□□□□□ -0.9
NUP85-225ENST00000584155 CAPN15O75808 1086 aa9.43□□□□□ -0.9
NUP85-225ENST00000584155 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
NUP85-225ENST00000584155 ABCB7O75027 752 aa9.19□□□□□ -0.94
NUP85-225ENST00000584155 TRHP20396 242 aaPredicted RBP9.16□□□□□ -0.94
NUP85-225ENST00000584155 ZNF219Q9P2Y4 722 aaPredicted RBP9.15□□□□□ -0.94
NUP85-225ENST00000584155 SLC4A2P04920 1241 aa9.12□□□□□ -0.95
NUP85-225ENST00000584155 CHRDL2Q6WN34 429 aa9.12□□□□□ -0.95
NUP85-225ENST00000584155 RBM42Q9BTD8 480 aaKnown RBP9.09□□□□□ -0.95
NUP85-225ENST00000584155 APLP2Q06481 763 aa9.07□□□□□ -0.96
NUP85-225ENST00000584155 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
NUP85-225ENST00000584155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.98□□□□□ -0.97
NUP85-225ENST00000584155 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
NUP85-225ENST00000584155 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
NUP85-225ENST00000584155 POLA2Q14181 598 aa8.83□□□□□ -1
NUP85-225ENST00000584155 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
NUP85-225ENST00000584155 AKT1S1Q96B36 256 aa8.8□□□□□ -1
NUP85-225ENST00000584155 NISCHQ9Y2I1 1504 aa8.8□□□□□ -1
NUP85-225ENST00000584155 KCNA4P22459 653 aa8.75□□□□□ -1.01
NUP85-225ENST00000584155 REM2Q8IYK8 340 aaPredicted RBP8.73□□□□□ -1.01
NUP85-225ENST00000584155 HAX1O00165 279 aa8.72□□□□□ -1.01
NUP85-225ENST00000584155 FXR2P51116 673 aaKnown RBP eCLIP8.69□□□□□ -1.02
NUP85-225ENST00000584155 EVX2Q03828 476 aa8.67□□□□□ -1.02
NUP85-225ENST00000584155 PITPNM1O00562 1244 aa8.65□□□□□ -1.02
NUP85-225ENST00000584155 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.02
NUP85-225ENST00000584155 OSCARQ8IYS5 282 aa8.59□□□□□ -1.03
NUP85-225ENST00000584155 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
NUP85-225ENST00000584155 ATF5Q9Y2D1 282 aaPredicted RBP8.54□□□□□ -1.04
NUP85-225ENST00000584155 LHX8Q68G74 356 aa8.47□□□□□ -1.05
NUP85-225ENST00000584155 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
NUP85-225ENST00000584155 GABBR2O75899 941 aa8.41□□□□□ -1.06
NUP85-225ENST00000584155 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
NUP85-225ENST00000584155 SPDYE2BA6NHP3 402 aa8.32□□□□□ -1.08
NUP85-225ENST00000584155 SPDYE6P0CI01 402 aa8.32□□□□□ -1.08
NUP85-225ENST00000584155 SPDYE2Q495Y8 402 aa8.32□□□□□ -1.08
NUP85-225ENST00000584155 FOXD4L1Q9NU39 408 aa8.3□□□□□ -1.08
NUP85-225ENST00000584155 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
NUP85-225ENST00000584155 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
NUP85-225ENST00000584155 SPDYE1Q8NFV5 336 aaPredicted RBP8.27□□□□□ -1.09
NUP85-225ENST00000584155 CLEC11AQ9Y240 323 aa8.25□□□□□ -1.09
NUP85-225ENST00000584155 CHADLQ6NUI6 762 aa8.2□□□□□ -1.1
NUP85-225ENST00000584155 SSUH2Q9Y2M2 353 aa8.2□□□□□ -1.1
NUP85-225ENST00000584155 ABCC9O60706 1549 aa8.16□□□□□ -1.1
NUP85-225ENST00000584155 FBLN2P98095 1184 aa8.14□□□□□ -1.11
NUP85-225ENST00000584155 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
NUP85-225ENST00000584155 SLC4A1APQ9BWU0 796 aaKnown RBP8.11□□□□□ -1.11
NUP85-225ENST00000584155 ATXN8OSP0DMR3 200 aa8.1□□□□□ -1.11
NUP85-225ENST00000584155 ZNF692Q9BU19 519 aaPredicted RBP8.1□□□□□ -1.11
NUP85-225ENST00000584155 CD44P16070 742 aaKnown RBP8.09□□□□□ -1.11
NUP85-225ENST00000584155 ZBTB22O15209 634 aa8.08□□□□□ -1.12
NUP85-225ENST00000584155 CLCN6P51797 869 aa8.08□□□□□ -1.12
NUP85-225ENST00000584155 PRR29P0C7W0 189 aa8.05□□□□□ -1.12
NUP85-225ENST00000584155 OTUD5Q96G74 571 aa8.05□□□□□ -1.12
NUP85-225ENST00000584155 FARP1Q9Y4F1 1045 aaPredicted RBP8.03□□□□□ -1.12
NUP85-225ENST00000584155 POTEMA6NI47 508 aa8.01□□□□□ -1.13
NUP85-225ENST00000584155 DCBLD2Q96PD2 775 aa8.01□□□□□ -1.13
NUP85-225ENST00000584155 POTEB2H3BUK9 544 aa8□□□□□ -1.13
NUP85-225ENST00000584155 PABPN1Q86U42 306 aaKnown RBP eCLIP7.98□□□□□ -1.136e-11■■■□□ 15.6
NUP85-225ENST00000584155 ZNF579Q8NAF0 562 aaKnown RBP7.98□□□□□ -1.13
NUP85-225ENST00000584155 POTEGQ6S5H5 508 aa7.97□□□□□ -1.13
NUP85-225ENST00000584155 GALR2O43603 387 aaPredicted RBP7.91□□□□□ -1.14
NUP85-225ENST00000584155 PCDH10Q9P2E7 1040 aa7.89□□□□□ -1.15
NUP85-225ENST00000584155 ZRANB1Q9UGI0 708 aa7.88□□□□□ -1.15
NUP85-225ENST00000584155 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
NUP85-225ENST00000584155 PELP1Q8IZL8 1130 aaKnown RBP7.83□□□□□ -1.16
NUP85-225ENST00000584155 POTEJP0CG39 1038 aa7.81□□□□□ -1.16
NUP85-225ENST00000584155 CREBZFQ9NS37 354 aa7.8□□□□□ -1.16
NUP85-225ENST00000584155 CCDC180Q9P1Z9 1646 aa7.78□□□□□ -1.16
NUP85-225ENST00000584155 PHF12Q96QT6 1004 aa7.76□□□□□ -1.17
NUP85-225ENST00000584155 ASTLQ6HA08 431 aaPredicted RBP7.73□□□□□ -1.17
NUP85-225ENST00000584155 METRNQ9UJH8 293 aa7.73□□□□□ -1.17
NUP85-225ENST00000584155 ATMINO43313 823 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms