RNA–Protein interactions for RNA: ENST00000583990.1

BPTF-217, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 464 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-217ENST00000583990 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
BPTF-217ENST00000583990 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
BPTF-217ENST00000583990 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
BPTF-217ENST00000583990 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
BPTF-217ENST00000583990 FOXD1Q16676 465 aa15.94■□□□□ 0.14
BPTF-217ENST00000583990 POTEDQ86YR6 584 aa15.64■□□□□ 0.09
BPTF-217ENST00000583990 MSH5O43196 834 aa15.05■□□□□ -0
BPTF-217ENST00000583990 PIAS4Q8N2W9 510 aaPredicted RBP14.75□□□□□ -0.05
BPTF-217ENST00000583990 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
BPTF-217ENST00000583990 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
BPTF-217ENST00000583990 ADRA2BP18089 450 aa14.44□□□□□ -0.1
BPTF-217ENST00000583990 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
BPTF-217ENST00000583990 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
BPTF-217ENST00000583990 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
BPTF-217ENST00000583990 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
BPTF-217ENST00000583990 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
BPTF-217ENST00000583990 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
BPTF-217ENST00000583990 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
BPTF-217ENST00000583990 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
BPTF-217ENST00000583990 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
BPTF-217ENST00000583990 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
BPTF-217ENST00000583990 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
BPTF-217ENST00000583990 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
BPTF-217ENST00000583990 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
BPTF-217ENST00000583990 KCNA4P22459 653 aa12.32□□□□□ -0.44
BPTF-217ENST00000583990 DNAJC5BQ9UF47 199 aa12.29□□□□□ -0.44
BPTF-217ENST00000583990 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
BPTF-217ENST00000583990 POTEHQ6S545 545 aa12.14□□□□□ -0.47
BPTF-217ENST00000583990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.474e-8■■■□□ 18.5
BPTF-217ENST00000583990 CCDC180Q9P1Z9 1646 aa11.97□□□□□ -0.49
BPTF-217ENST00000583990 DSG3P32926 999 aa11.84□□□□□ -0.51
BPTF-217ENST00000583990 ABCC9O60706 1549 aa11.81□□□□□ -0.52
BPTF-217ENST00000583990 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
BPTF-217ENST00000583990 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
BPTF-217ENST00000583990 CAPN15O75808 1086 aa11.79□□□□□ -0.52
BPTF-217ENST00000583990 SLC4A1APQ9BWU0 796 aaKnown RBP11.77□□□□□ -0.53
BPTF-217ENST00000583990 ABCB7O75027 752 aa11.5□□□□□ -0.57
BPTF-217ENST00000583990 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
BPTF-217ENST00000583990 TRHP20396 242 aaPredicted RBP11.49□□□□□ -0.57
BPTF-217ENST00000583990 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
BPTF-217ENST00000583990 DCAF8L2P0C7V8 631 aa11.39□□□□□ -0.59
BPTF-217ENST00000583990 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
BPTF-217ENST00000583990 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
BPTF-217ENST00000583990 APLP2Q06481 763 aa11.33□□□□□ -0.6
BPTF-217ENST00000583990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.3□□□□□ -0.6
BPTF-217ENST00000583990 ZBTB22O15209 634 aa11.3□□□□□ -0.6
BPTF-217ENST00000583990 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
BPTF-217ENST00000583990 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
BPTF-217ENST00000583990 CHRDL2Q6WN34 429 aa11.26□□□□□ -0.61
BPTF-217ENST00000583990 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
BPTF-217ENST00000583990 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
BPTF-217ENST00000583990 RB1CC1Q8TDY2 1594 aa11.25□□□□□ -0.61
BPTF-217ENST00000583990 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
BPTF-217ENST00000583990 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
BPTF-217ENST00000583990 NACADO15069 1562 aa11.2□□□□□ -0.62
BPTF-217ENST00000583990 UNC13AQ9UPW8 1703 aa11.18□□□□□ -0.62
BPTF-217ENST00000583990 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
BPTF-217ENST00000583990 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
BPTF-217ENST00000583990 SCRIBQ14160 1630 aa11.08□□□□□ -0.64
BPTF-217ENST00000583990 PABPN1Q86U42 306 aaKnown RBP eCLIP11.06□□□□□ -0.64
BPTF-217ENST00000583990 DCAF1Q9Y4B6 1507 aa11.05□□□□□ -0.64
BPTF-217ENST00000583990 POLA2Q14181 598 aa11.05□□□□□ -0.64
BPTF-217ENST00000583990 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
BPTF-217ENST00000583990 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
BPTF-217ENST00000583990 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
BPTF-217ENST00000583990 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
BPTF-217ENST00000583990 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
BPTF-217ENST00000583990 SHROOM4Q9ULL8 1493 aa10.88□□□□□ -0.67
BPTF-217ENST00000583990 HAX1O00165 279 aa10.85□□□□□ -0.67
BPTF-217ENST00000583990 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
BPTF-217ENST00000583990 PITPNM1O00562 1244 aa10.74□□□□□ -0.69
BPTF-217ENST00000583990 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.691e-6■■□□□ 14
BPTF-217ENST00000583990 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
BPTF-217ENST00000583990 EVX2Q03828 476 aa10.72□□□□□ -0.69
BPTF-217ENST00000583990 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
BPTF-217ENST00000583990 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
BPTF-217ENST00000583990 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
BPTF-217ENST00000583990 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
BPTF-217ENST00000583990 FBLN2P98095 1184 aa10.58□□□□□ -0.72
BPTF-217ENST00000583990 SMARCA4P51532 1647 aa10.51□□□□□ -0.73
BPTF-217ENST00000583990 MROH2BQ7Z745 1585 aa10.48□□□□□ -0.73
BPTF-217ENST00000583990 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
BPTF-217ENST00000583990 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
BPTF-217ENST00000583990 LHX8Q68G74 356 aa10.44□□□□□ -0.74
BPTF-217ENST00000583990 BAZ1AQ9NRL2 1556 aaPredicted RBP10.43□□□□□ -0.74
BPTF-217ENST00000583990 WIZO95785 1651 aa10.43□□□□□ -0.74
BPTF-217ENST00000583990 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
BPTF-217ENST00000583990 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
BPTF-217ENST00000583990 GABBR2O75899 941 aa10.4□□□□□ -0.74
BPTF-217ENST00000583990 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
BPTF-217ENST00000583990 SPDYE2BA6NHP3 402 aa10.37□□□□□ -0.75
BPTF-217ENST00000583990 SPDYE6P0CI01 402 aa10.37□□□□□ -0.75
BPTF-217ENST00000583990 SPDYE2Q495Y8 402 aa10.37□□□□□ -0.75
BPTF-217ENST00000583990 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
BPTF-217ENST00000583990 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
BPTF-217ENST00000583990 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
BPTF-217ENST00000583990 SPDYE1Q8NFV5 336 aaPredicted RBP10.32□□□□□ -0.76
BPTF-217ENST00000583990 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
BPTF-217ENST00000583990 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
BPTF-217ENST00000583990 HMGXB3Q12766 1538 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms