RNA–Protein interactions for RNA: ENST00000583747.1

PHF12-213, Transcript of PHD finger protein 12, humanhuman

TSL 3

Gene PHF12, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-213ENST00000583747 NISCHQ9Y2I1 1504 aa50.76■■■■■ 5.72
PHF12-213ENST00000583747 CCDC180Q9P1Z9 1646 aa45.23■■■■■ 4.83
PHF12-213ENST00000583747 ABCC9O60706 1549 aa44.66■■■■■ 4.74
PHF12-213ENST00000583747 RB1CC1Q8TDY2 1594 aa42.81■■■■■ 4.44
PHF12-213ENST00000583747 NACADO15069 1562 aa42.69■■■■■ 4.42
PHF12-213ENST00000583747 DCAF8L2P0C7V8 631 aa42.66■■■■■ 4.42
PHF12-213ENST00000583747 MYO15BQ96JP2 1530 aa42.32■■■■■ 4.37
PHF12-213ENST00000583747 ZCCHC6Q5VYS8 1495 aaKnown RBP42.17■■■■■ 4.34
PHF12-213ENST00000583747 DCAF1Q9Y4B6 1507 aa42■■■■■ 4.31
PHF12-213ENST00000583747 PABPN1Q86U42 306 aaKnown RBP eCLIP41.72■■■■■ 4.27
PHF12-213ENST00000583747 UNC13AQ9UPW8 1703 aa41.72■■■■■ 4.27
PHF12-213ENST00000583747 BICRAQ9NZM4 1560 aa41.47■■■■■ 4.23
PHF12-213ENST00000583747 DNAJC5BQ9UF47 199 aa41.36■■■■■ 4.21
PHF12-213ENST00000583747 SCRIBQ14160 1630 aa41.24■■■■■ 4.19
PHF12-213ENST00000583747 SHROOM4Q9ULL8 1493 aa41.08■■■■■ 4.17
PHF12-213ENST00000583747 EIF4G1Q04637 1599 aaKnown RBP40.44■■■■■ 4.06
PHF12-213ENST00000583747 CC2D2AQ9P2K1 1620 aa40.36■■■■■ 4.05
PHF12-213ENST00000583747 CECR2Q9BXF3 1484 aa40.19■■■■■ 4.03
PHF12-213ENST00000583747 SMARCA4P51532 1647 aa39.42■■■■□ 3.9
PHF12-213ENST00000583747 NCAPD3P42695 1498 aa39.42■■■■□ 3.9
PHF12-213ENST00000583747 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.89
PHF12-213ENST00000583747 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
PHF12-213ENST00000583747 SMARCA2P51531 1590 aa39.29■■■■□ 3.88
PHF12-213ENST00000583747 HMGXB3Q12766 1538 aa39.14■■■■□ 3.86
PHF12-213ENST00000583747 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
PHF12-213ENST00000583747 PEG3Q9GZU2 1588 aa39.07■■■■□ 3.84
PHF12-213ENST00000583747 BAZ1BQ9UIG0 1483 aaKnown RBP39.01■■■■□ 3.84
PHF12-213ENST00000583747 WIZO95785 1651 aa38.62■■■■□ 3.77
PHF12-213ENST00000583747 ERCC6Q03468 1493 aa38.56■■■■□ 3.76
PHF12-213ENST00000583747 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
PHF12-213ENST00000583747 NESP48681 1621 aa38.52■■■■□ 3.76
PHF12-213ENST00000583747 LAMC3Q9Y6N6 1575 aa38.4■■■■□ 3.74
PHF12-213ENST00000583747 CUX2O14529 1486 aa38.28■■■■□ 3.72
PHF12-213ENST00000583747 CADPSQ9ULU8 1353 aa38.27■■■■□ 3.72
PHF12-213ENST00000583747 PDS5BQ9NTI5 1447 aa38.22■■■■□ 3.71
PHF12-213ENST00000583747 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
PHF12-213ENST00000583747 KIF21AQ7Z4S6 1674 aa38■■■■□ 3.67
PHF12-213ENST00000583747 THOC2Q8NI27 1593 aaKnown RBP37.98■■■■□ 3.67
PHF12-213ENST00000583747 CFTRP13569 1480 aa37.93■■■■□ 3.66
PHF12-213ENST00000583747 CCDC88BA6NC98 1476 aa37.8■■■■□ 3.64
PHF12-213ENST00000583747 MRC2Q9UBG0 1479 aa37.79■■■■□ 3.64
PHF12-213ENST00000583747 FANCD2Q9BXW9 1451 aa37.78■■■■□ 3.64
PHF12-213ENST00000583747 CEP164Q9UPV0 1460 aa37.77■■■■□ 3.64
PHF12-213ENST00000583747 WDR62O43379 1518 aa37.66■■■■□ 3.62
PHF12-213ENST00000583747 DNAJC5Q9H3Z4 198 aa37.6■■■■□ 3.61
PHF12-213ENST00000583747 PRDM2Q13029 1718 aa37.5■■■■□ 3.59
PHF12-213ENST00000583747 URB2Q14146 1524 aaKnown RBP37.4■■■■□ 3.58
PHF12-213ENST00000583747 SUPT5HO00267 1087 aaKnown RBP37.34■■■■□ 3.57
PHF12-213ENST00000583747 ABCC8Q09428 1581 aa37.17■■■■□ 3.54
PHF12-213ENST00000583747 TOPBP1Q92547 1522 aa37.13■■■■□ 3.53
PHF12-213ENST00000583747 DNMBPQ6XZF7 1577 aa37.04■■■■□ 3.52
PHF12-213ENST00000583747 IFT140Q96RY7 1462 aa37.02■■■■□ 3.52
PHF12-213ENST00000583747 ZNF608Q9ULD9 1512 aaPredicted RBP36.84■■■■□ 3.49
PHF12-213ENST00000583747 POLA1P09884 1462 aaPredicted RBP36.78■■■■□ 3.48
PHF12-213ENST00000583747 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
PHF12-213ENST00000583747 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
PHF12-213ENST00000583747 CUX1P39880 1505 aa36.69■■■■□ 3.46
PHF12-213ENST00000583747 SOGA1O94964 1423 aa36.68■■■■□ 3.46
PHF12-213ENST00000583747 EIF4G3O43432 1585 aaKnown RBP36.64■■■■□ 3.46
PHF12-213ENST00000583747 FGD5Q6ZNL6 1462 aa36.63■■■■□ 3.45
PHF12-213ENST00000583747 RAD54L2Q9Y4B4 1467 aa36.63■■■■□ 3.45
PHF12-213ENST00000583747 AQRO60306 1485 aaKnown RBP eCLIP36.62■■■■□ 3.45
PHF12-213ENST00000583747 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
PHF12-213ENST00000583747 WDR97A6NE52 1622 aa36.45■■■■□ 3.42
PHF12-213ENST00000583747 WRNQ14191 1432 aaPredicted RBP eCLIP36.36■■■■□ 3.41
PHF12-213ENST00000583747 FBLN2P98095 1184 aa36.31■■■■□ 3.4
PHF12-213ENST00000583747 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
PHF12-213ENST00000583747 TOP2BQ02880 1626 aa36.28■■■■□ 3.4
PHF12-213ENST00000583747 GRIN2BQ13224 1484 aa36.28■■■■□ 3.4
PHF12-213ENST00000583747 BIVM-ERCC5R4GMW8 1640 aa36.25■■■■□ 3.39
PHF12-213ENST00000583747 SNAPC4Q5SXM2 1469 aa36.24■■■■□ 3.39
PHF12-213ENST00000583747 GAPVD1Q14C86 1478 aa36.23■■■■□ 3.39
PHF12-213ENST00000583747 CHD1O14646 1710 aa36.22■■■■□ 3.39
PHF12-213ENST00000583747 SYNJ1O43426 1573 aa36.22■■■■□ 3.39
PHF12-213ENST00000583747 MAGI1Q96QZ7 1491 aaPredicted RBP36.21■■■■□ 3.39
PHF12-213ENST00000583747 TRIM41Q8WV44 630 aa36.19■■■■□ 3.38
PHF12-213ENST00000583747 CHMP7Q8WUX9 453 aaPredicted RBP36.17■■■■□ 3.38
PHF12-213ENST00000583747 ABCA5Q8WWZ7 1642 aa36.11■■■■□ 3.37
PHF12-213ENST00000583747 PBRM1Q86U86 1689 aa36.08■■■■□ 3.37
PHF12-213ENST00000583747 SYNJ2O15056 1496 aa36.07■■■■□ 3.37
PHF12-213ENST00000583747 RIMBP3CA6NJZ7 1639 aa36.03■■■■□ 3.36
PHF12-213ENST00000583747 RIMBP3BA6NNM3 1639 aa36.03■■■■□ 3.36
PHF12-213ENST00000583747 RIMBP3Q9UFD9 1639 aa36.03■■■■□ 3.36
PHF12-213ENST00000583747 ARHGEF11O15085 1522 aa36.01■■■■□ 3.36
PHF12-213ENST00000583747 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
PHF12-213ENST00000583747 ERICH3Q5RHP9 1530 aa35.84■■■■□ 3.33
PHF12-213ENST00000583747 FHAD1B1AJZ9 1412 aa35.82■■■■□ 3.32
PHF12-213ENST00000583747 ADAMTS12P58397 1594 aa35.8■■■■□ 3.32
PHF12-213ENST00000583747 GRIN2AQ12879 1464 aa35.79■■■■□ 3.32
PHF12-213ENST00000583747 CYB5RLQ6IPT4 315 aa35.78■■■■□ 3.32
PHF12-213ENST00000583747 ARAP1Q96P48 1450 aa35.69■■■■□ 3.3
PHF12-213ENST00000583747 KIF27Q86VH2 1401 aa35.66■■■■□ 3.3
PHF12-213ENST00000583747 NUP160Q12769 1436 aa35.65■■■■□ 3.3
PHF12-213ENST00000583747 CEP170Q5SW79 1584 aa35.58■■■■□ 3.29
PHF12-213ENST00000583747 IGF1RP08069 1367 aa35.57■■■■□ 3.28
PHF12-213ENST00000583747 CUL7Q14999 1698 aa35.41■■■■□ 3.26
PHF12-213ENST00000583747 SHROOM2Q13796 1616 aa35.37■■■■□ 3.25
PHF12-213ENST00000583747 JPH4Q96JJ6 628 aa35.37■■■■□ 3.25
PHF12-213ENST00000583747 CARMIL1Q5VZK9 1371 aa35.36■■■■□ 3.25
PHF12-213ENST00000583747 ERCC6L2Q5T890 1561 aa35.32■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms