RNA–Protein interactions for RNA: ENST00000582860.1

LLGL2-220, Transcript of LLGL2, scribble cell polarity complex component, humanhuman

TSL 3

Gene LLGL2, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL2-220ENST00000582860 NISCHQ9Y2I1 1504 aa41.74■■■■■ 4.27
LLGL2-220ENST00000582860 CCDC180Q9P1Z9 1646 aa37.16■■■■□ 3.54
LLGL2-220ENST00000582860 ABCC9O60706 1549 aa36.75■■■■□ 3.47
LLGL2-220ENST00000582860 DCAF8L2P0C7V8 631 aa35.18■■■■□ 3.22
LLGL2-220ENST00000582860 RB1CC1Q8TDY2 1594 aa35.17■■■■□ 3.22
LLGL2-220ENST00000582860 NACADO15069 1562 aa35.04■■■■□ 3.2
LLGL2-220ENST00000582860 ZCCHC6Q5VYS8 1495 aaKnown RBP34.71■■■■□ 3.15
LLGL2-220ENST00000582860 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
LLGL2-220ENST00000582860 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
LLGL2-220ENST00000582860 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
LLGL2-220ENST00000582860 UNC13AQ9UPW8 1703 aa34.29■■■■□ 3.08
LLGL2-220ENST00000582860 BICRAQ9NZM4 1560 aa34.07■■■■□ 3.05
LLGL2-220ENST00000582860 SCRIBQ14160 1630 aa34■■■■□ 3.03
LLGL2-220ENST00000582860 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
LLGL2-220ENST00000582860 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
LLGL2-220ENST00000582860 EIF4G1Q04637 1599 aaKnown RBP33.23■■■□□ 2.91
LLGL2-220ENST00000582860 CC2D2AQ9P2K1 1620 aa33.17■■■□□ 2.9
LLGL2-220ENST00000582860 CECR2Q9BXF3 1484 aa33.04■■■□□ 2.88
LLGL2-220ENST00000582860 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
LLGL2-220ENST00000582860 BAZ1AQ9NRL2 1556 aaPredicted RBP32.37■■■□□ 2.77
LLGL2-220ENST00000582860 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
LLGL2-220ENST00000582860 ATAD2BQ9ULI0 1458 aa32.35■■■□□ 2.77
LLGL2-220ENST00000582860 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
LLGL2-220ENST00000582860 MROH2BQ7Z745 1585 aa32.19■■■□□ 2.74
LLGL2-220ENST00000582860 HMGXB3Q12766 1538 aa32.14■■■□□ 2.74
LLGL2-220ENST00000582860 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
LLGL2-220ENST00000582860 PEG3Q9GZU2 1588 aa32.07■■■□□ 2.72
LLGL2-220ENST00000582860 WIZO95785 1651 aa31.83■■■□□ 2.69
LLGL2-220ENST00000582860 RSF1Q96T23 1441 aaPredicted RBP31.73■■■□□ 2.67
LLGL2-220ENST00000582860 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
LLGL2-220ENST00000582860 NESP48681 1621 aa31.71■■■□□ 2.67
LLGL2-220ENST00000582860 LAMC3Q9Y6N6 1575 aa31.52■■■□□ 2.64
LLGL2-220ENST00000582860 TOP2AP11388 1531 aaKnown RBP31.46■■■□□ 2.63
LLGL2-220ENST00000582860 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
LLGL2-220ENST00000582860 CUX2O14529 1486 aa31.39■■■□□ 2.62
LLGL2-220ENST00000582860 PDS5BQ9NTI5 1447 aa31.38■■■□□ 2.61
LLGL2-220ENST00000582860 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.6
LLGL2-220ENST00000582860 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
LLGL2-220ENST00000582860 CFTRP13569 1480 aa31.15■■■□□ 2.58
LLGL2-220ENST00000582860 CCDC88BA6NC98 1476 aa31.12■■■□□ 2.57
LLGL2-220ENST00000582860 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
LLGL2-220ENST00000582860 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
LLGL2-220ENST00000582860 MRC2Q9UBG0 1479 aa31.06■■■□□ 2.56
LLGL2-220ENST00000582860 WDR62O43379 1518 aa30.93■■■□□ 2.54
LLGL2-220ENST00000582860 SUPT5HO00267 1087 aaKnown RBP30.87■■■□□ 2.53
LLGL2-220ENST00000582860 PRDM2Q13029 1718 aa30.81■■■□□ 2.52
LLGL2-220ENST00000582860 DNAJC5Q9H3Z4 198 aa30.77■■■□□ 2.52
LLGL2-220ENST00000582860 URB2Q14146 1524 aaKnown RBP30.77■■■□□ 2.52
LLGL2-220ENST00000582860 TOPBP1Q92547 1522 aa30.53■■■□□ 2.48
LLGL2-220ENST00000582860 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
LLGL2-220ENST00000582860 DNMBPQ6XZF7 1577 aa30.46■■■□□ 2.47
LLGL2-220ENST00000582860 IFT140Q96RY7 1462 aa30.41■■■□□ 2.46
LLGL2-220ENST00000582860 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
LLGL2-220ENST00000582860 POLA1P09884 1462 aaPredicted RBP30.26■■■□□ 2.44
LLGL2-220ENST00000582860 CUX1P39880 1505 aa30.2■■■□□ 2.42
LLGL2-220ENST00000582860 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
LLGL2-220ENST00000582860 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
LLGL2-220ENST00000582860 SOGA1O94964 1423 aa30.17■■■□□ 2.42
LLGL2-220ENST00000582860 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
LLGL2-220ENST00000582860 EIF4G3O43432 1585 aaKnown RBP30.15■■■□□ 2.42
LLGL2-220ENST00000582860 AQRO60306 1485 aaKnown RBP eCLIP30.13■■■□□ 2.41
LLGL2-220ENST00000582860 OSCARQ8IYS5 282 aa30.12■■■□□ 2.41
LLGL2-220ENST00000582860 TDRD9Q8NDG6 1382 aaKnown RBP30.05■■■□□ 2.4
LLGL2-220ENST00000582860 WRNQ14191 1432 aaPredicted RBP eCLIP29.95■■■□□ 2.38
LLGL2-220ENST00000582860 FBLN2P98095 1184 aa29.92■■■□□ 2.38
LLGL2-220ENST00000582860 WDR97A6NE52 1622 aa29.89■■■□□ 2.38
LLGL2-220ENST00000582860 SYNJ1O43426 1573 aa29.86■■■□□ 2.37
LLGL2-220ENST00000582860 TOP2BQ02880 1626 aa29.85■■■□□ 2.37
LLGL2-220ENST00000582860 SNAPC4Q5SXM2 1469 aa29.84■■■□□ 2.37
LLGL2-220ENST00000582860 BIVM-ERCC5R4GMW8 1640 aa29.83■■■□□ 2.37
LLGL2-220ENST00000582860 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
LLGL2-220ENST00000582860 GRIN2BQ13224 1484 aa29.82■■■□□ 2.36
LLGL2-220ENST00000582860 CHD1O14646 1710 aa29.8■■■□□ 2.36
LLGL2-220ENST00000582860 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
LLGL2-220ENST00000582860 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
LLGL2-220ENST00000582860 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
LLGL2-220ENST00000582860 MAGI1Q96QZ7 1491 aaPredicted RBP29.74■■■□□ 2.35
LLGL2-220ENST00000582860 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
LLGL2-220ENST00000582860 PBRM1Q86U86 1689 aa29.69■■■□□ 2.34
LLGL2-220ENST00000582860 SYNJ2O15056 1496 aa29.66■■■□□ 2.34
LLGL2-220ENST00000582860 RIMBP3CA6NJZ7 1639 aa29.61■■■□□ 2.33
LLGL2-220ENST00000582860 RIMBP3BA6NNM3 1639 aa29.61■■■□□ 2.33
LLGL2-220ENST00000582860 RIMBP3Q9UFD9 1639 aa29.61■■■□□ 2.33
LLGL2-220ENST00000582860 ARHGEF11O15085 1522 aa29.58■■■□□ 2.33
LLGL2-220ENST00000582860 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
LLGL2-220ENST00000582860 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
LLGL2-220ENST00000582860 ERICH3Q5RHP9 1530 aa29.45■■■□□ 2.31
LLGL2-220ENST00000582860 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
LLGL2-220ENST00000582860 GRIN2AQ12879 1464 aa29.43■■■□□ 2.3
LLGL2-220ENST00000582860 CYB5RLQ6IPT4 315 aa29.42■■■□□ 2.3
LLGL2-220ENST00000582860 KIF27Q86VH2 1401 aa29.35■■■□□ 2.29
LLGL2-220ENST00000582860 ARAP1Q96P48 1450 aa29.33■■■□□ 2.29
LLGL2-220ENST00000582860 CEP170Q5SW79 1584 aa29.29■■■□□ 2.28
LLGL2-220ENST00000582860 NUP160Q12769 1436 aa29.28■■■□□ 2.28
LLGL2-220ENST00000582860 IGF1RP08069 1367 aa29.25■■■□□ 2.27
LLGL2-220ENST00000582860 CUL7Q14999 1698 aa29.14■■■□□ 2.26
LLGL2-220ENST00000582860 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
LLGL2-220ENST00000582860 CARMIL1Q5VZK9 1371 aa29.08■■■□□ 2.25
LLGL2-220ENST00000582860 SHROOM2Q13796 1616 aa29.06■■■□□ 2.24
LLGL2-220ENST00000582860 JPH4Q96JJ6 628 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms