RNA–Protein interactions for RNA: ENST00000582654.1

AC004448.4-211, humanhuman

TSL 3 BASIC

Gene AC004448.4, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.4-211ENST00000582654 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
AC004448.4-211ENST00000582654 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
AC004448.4-211ENST00000582654 ABCC9O60706 1549 aa19.75■□□□□ 0.75
AC004448.4-211ENST00000582654 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
AC004448.4-211ENST00000582654 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
AC004448.4-211ENST00000582654 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
AC004448.4-211ENST00000582654 DCAF8L2P0C7V8 631 aa19.17■□□□□ 0.66
AC004448.4-211ENST00000582654 NACADO15069 1562 aa19.02■□□□□ 0.64
AC004448.4-211ENST00000582654 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
AC004448.4-211ENST00000582654 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
AC004448.4-211ENST00000582654 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
AC004448.4-211ENST00000582654 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
AC004448.4-211ENST00000582654 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
AC004448.4-211ENST00000582654 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
AC004448.4-211ENST00000582654 SUPT5HO00267 1087 aaKnown RBP18.31■□□□□ 0.52
AC004448.4-211ENST00000582654 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
AC004448.4-211ENST00000582654 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
AC004448.4-211ENST00000582654 BAZ1AQ9NRL2 1556 aaPredicted RBP18.11■□□□□ 0.49
AC004448.4-211ENST00000582654 CECR2Q9BXF3 1484 aa18.05■□□□□ 0.48
AC004448.4-211ENST00000582654 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
AC004448.4-211ENST00000582654 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
AC004448.4-211ENST00000582654 WIZO95785 1651 aa17.87■□□□□ 0.45
AC004448.4-211ENST00000582654 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
AC004448.4-211ENST00000582654 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
AC004448.4-211ENST00000582654 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
AC004448.4-211ENST00000582654 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
AC004448.4-211ENST00000582654 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
AC004448.4-211ENST00000582654 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
AC004448.4-211ENST00000582654 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
AC004448.4-211ENST00000582654 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
AC004448.4-211ENST00000582654 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
AC004448.4-211ENST00000582654 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
AC004448.4-211ENST00000582654 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
AC004448.4-211ENST00000582654 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
AC004448.4-211ENST00000582654 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
AC004448.4-211ENST00000582654 CUX2O14529 1486 aa17.21■□□□□ 0.35
AC004448.4-211ENST00000582654 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
AC004448.4-211ENST00000582654 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
AC004448.4-211ENST00000582654 CFTRP13569 1480 aa17.12■□□□□ 0.33
AC004448.4-211ENST00000582654 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
AC004448.4-211ENST00000582654 WRNQ14191 1432 aaPredicted RBP eCLIP17.09■□□□□ 0.33
AC004448.4-211ENST00000582654 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
AC004448.4-211ENST00000582654 EEA1Q15075 1411 aa17.01■□□□□ 0.31
AC004448.4-211ENST00000582654 TOP2BQ02880 1626 aa16.98■□□□□ 0.31
AC004448.4-211ENST00000582654 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
AC004448.4-211ENST00000582654 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
AC004448.4-211ENST00000582654 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
AC004448.4-211ENST00000582654 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
AC004448.4-211ENST00000582654 LOC105371045A0A1W2PR82 267 aa16.84■□□□□ 0.29
AC004448.4-211ENST00000582654 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
AC004448.4-211ENST00000582654 CUX1P39880 1505 aa16.83■□□□□ 0.28
AC004448.4-211ENST00000582654 NESP48681 1621 aa16.81■□□□□ 0.28
AC004448.4-211ENST00000582654 SOGA1O94964 1423 aa16.8■□□□□ 0.28
AC004448.4-211ENST00000582654 PDS5BQ9NTI5 1447 aa16.8■□□□□ 0.28
AC004448.4-211ENST00000582654 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
AC004448.4-211ENST00000582654 CEP164Q9UPV0 1460 aa16.76■□□□□ 0.27
AC004448.4-211ENST00000582654 DNMBPQ6XZF7 1577 aa16.75■□□□□ 0.27
AC004448.4-211ENST00000582654 KIF21BO75037 1637 aa16.72■□□□□ 0.27
AC004448.4-211ENST00000582654 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
AC004448.4-211ENST00000582654 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
AC004448.4-211ENST00000582654 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
AC004448.4-211ENST00000582654 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
AC004448.4-211ENST00000582654 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
AC004448.4-211ENST00000582654 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
AC004448.4-211ENST00000582654 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
AC004448.4-211ENST00000582654 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.26
AC004448.4-211ENST00000582654 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
AC004448.4-211ENST00000582654 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
AC004448.4-211ENST00000582654 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
AC004448.4-211ENST00000582654 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
AC004448.4-211ENST00000582654 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
AC004448.4-211ENST00000582654 PRXQ9BXM0 1461 aa16.55■□□□□ 0.24
AC004448.4-211ENST00000582654 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
AC004448.4-211ENST00000582654 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
AC004448.4-211ENST00000582654 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
AC004448.4-211ENST00000582654 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
AC004448.4-211ENST00000582654 RAPGEF2Q9Y4G8 1499 aa16.49■□□□□ 0.23
AC004448.4-211ENST00000582654 IGF1RP08069 1367 aa16.46■□□□□ 0.23
AC004448.4-211ENST00000582654 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
AC004448.4-211ENST00000582654 CUL7Q14999 1698 aa16.46■□□□□ 0.23
AC004448.4-211ENST00000582654 WDR62O43379 1518 aa16.45■□□□□ 0.22
AC004448.4-211ENST00000582654 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
AC004448.4-211ENST00000582654 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
AC004448.4-211ENST00000582654 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
AC004448.4-211ENST00000582654 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
AC004448.4-211ENST00000582654 CLIP1P30622 1438 aa16.39■□□□□ 0.21
AC004448.4-211ENST00000582654 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
AC004448.4-211ENST00000582654 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
AC004448.4-211ENST00000582654 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
AC004448.4-211ENST00000582654 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
AC004448.4-211ENST00000582654 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
AC004448.4-211ENST00000582654 VPS8Q8N3P4 1428 aa16.28■□□□□ 0.2
AC004448.4-211ENST00000582654 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.19
AC004448.4-211ENST00000582654 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
AC004448.4-211ENST00000582654 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
AC004448.4-211ENST00000582654 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
AC004448.4-211ENST00000582654 APLP2Q06481 763 aa16.19■□□□□ 0.18
AC004448.4-211ENST00000582654 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
AC004448.4-211ENST00000582654 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
AC004448.4-211ENST00000582654 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms