RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
TRAPPC8-210ENST00000582513 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
TRAPPC8-210ENST00000582513 PELP1Q8IZL8 1130 aaKnown RBP26.62■■□□□ 1.85
TRAPPC8-210ENST00000582513 SUPT5HO00267 1087 aaKnown RBP26.22■■□□□ 1.79
TRAPPC8-210ENST00000582513 ZCCHC6Q5VYS8 1495 aaKnown RBP26.03■■□□□ 1.76
TRAPPC8-210ENST00000582513 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
TRAPPC8-210ENST00000582513 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
TRAPPC8-210ENST00000582513 MYT1Q01538 1121 aa25.94■■□□□ 1.74
TRAPPC8-210ENST00000582513 HRCP23327 699 aa25.47■■□□□ 1.67
TRAPPC8-210ENST00000582513 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
TRAPPC8-210ENST00000582513 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
TRAPPC8-210ENST00000582513 MYO15BQ96JP2 1530 aa25.28■■□□□ 1.64
TRAPPC8-210ENST00000582513 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
TRAPPC8-210ENST00000582513 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
TRAPPC8-210ENST00000582513 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
TRAPPC8-210ENST00000582513 LOC105371045A0A1W2PR82 267 aa24.76■■□□□ 1.55
TRAPPC8-210ENST00000582513 SCRIBQ14160 1630 aa24.66■■□□□ 1.54
TRAPPC8-210ENST00000582513 ABCC9O60706 1549 aa24.56■■□□□ 1.52
TRAPPC8-210ENST00000582513 PRKCSHP14314 528 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC8-210ENST00000582513 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
TRAPPC8-210ENST00000582513 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
TRAPPC8-210ENST00000582513 BCL11AQ9H165 835 aa24.46■■□□□ 1.51
TRAPPC8-210ENST00000582513 FAM9AQ8IZU1 332 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC8-210ENST00000582513 TRIM41Q8WV44 630 aa24.29■■□□□ 1.48
TRAPPC8-210ENST00000582513 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
TRAPPC8-210ENST00000582513 EHMT2Q96KQ7 1210 aa24.24■■□□□ 1.47
TRAPPC8-210ENST00000582513 CECR2Q9BXF3 1484 aa24.18■■□□□ 1.46
TRAPPC8-210ENST00000582513 GTF3C3Q9Y5Q9 886 aa24.1■■□□□ 1.45
TRAPPC8-210ENST00000582513 TRIM26Q12899 539 aaPredicted RBP24.1■■□□□ 1.45
TRAPPC8-210ENST00000582513 NACADO15069 1562 aa24.07■■□□□ 1.44
TRAPPC8-210ENST00000582513 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
TRAPPC8-210ENST00000582513 CENPBP07199 599 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC8-210ENST00000582513 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
TRAPPC8-210ENST00000582513 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
TRAPPC8-210ENST00000582513 WIZO95785 1651 aa23.92■■□□□ 1.42
TRAPPC8-210ENST00000582513 ERICH6Q7L0X2 663 aa23.85■■□□□ 1.41
TRAPPC8-210ENST00000582513 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC8-210ENST00000582513 ZEB1P37275 1124 aaPredicted RBP23.49■■□□□ 1.35
TRAPPC8-210ENST00000582513 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
TRAPPC8-210ENST00000582513 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
TRAPPC8-210ENST00000582513 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
TRAPPC8-210ENST00000582513 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
TRAPPC8-210ENST00000582513 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
TRAPPC8-210ENST00000582513 TOP2AP11388 1531 aaKnown RBP23.42■■□□□ 1.34
TRAPPC8-210ENST00000582513 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.34
TRAPPC8-210ENST00000582513 ANP32EQ9BTT0 268 aa23.38■■□□□ 1.33
TRAPPC8-210ENST00000582513 APLP2Q06481 763 aa23.35■■□□□ 1.33
TRAPPC8-210ENST00000582513 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
TRAPPC8-210ENST00000582513 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
TRAPPC8-210ENST00000582513 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC8-210ENST00000582513 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
TRAPPC8-210ENST00000582513 SOGA1O94964 1423 aa23.29■■□□□ 1.32
TRAPPC8-210ENST00000582513 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
TRAPPC8-210ENST00000582513 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
TRAPPC8-210ENST00000582513 UBTFP17480 764 aaKnown RBP23.19■■□□□ 1.3
TRAPPC8-210ENST00000582513 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
TRAPPC8-210ENST00000582513 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
TRAPPC8-210ENST00000582513 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
TRAPPC8-210ENST00000582513 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
TRAPPC8-210ENST00000582513 DIEXFQ68CQ4 756 aaKnown RBP22.96■■□□□ 1.27
TRAPPC8-210ENST00000582513 ANO8Q9HCE9 1232 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC8-210ENST00000582513 EEA1Q15075 1411 aa22.94■■□□□ 1.26
TRAPPC8-210ENST00000582513 RANGAP1P46060 587 aaPredicted RBP22.92■■□□□ 1.26
TRAPPC8-210ENST00000582513 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
TRAPPC8-210ENST00000582513 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
TRAPPC8-210ENST00000582513 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
TRAPPC8-210ENST00000582513 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
TRAPPC8-210ENST00000582513 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
TRAPPC8-210ENST00000582513 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.24
TRAPPC8-210ENST00000582513 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
TRAPPC8-210ENST00000582513 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
TRAPPC8-210ENST00000582513 CLIP1P30622 1438 aa22.72■■□□□ 1.23
TRAPPC8-210ENST00000582513 CCDC136Q96JN2 1154 aa22.69■■□□□ 1.22
TRAPPC8-210ENST00000582513 RAPGEF2Q9Y4G8 1499 aa22.68■■□□□ 1.22
TRAPPC8-210ENST00000582513 KIF21BO75037 1637 aa22.63■■□□□ 1.21
TRAPPC8-210ENST00000582513 TSHZ2Q9NRE2 1034 aa22.62■■□□□ 1.21
TRAPPC8-210ENST00000582513 EIF5BO60841 1220 aaKnown RBP22.59■■□□□ 1.21
TRAPPC8-210ENST00000582513 VPS8Q8N3P4 1428 aa22.56■■□□□ 1.2
TRAPPC8-210ENST00000582513 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
TRAPPC8-210ENST00000582513 ZNF316A6NFI3 1004 aaPredicted RBP22.49■■□□□ 1.19
TRAPPC8-210ENST00000582513 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
TRAPPC8-210ENST00000582513 PLEKHG5O94827 1062 aa22.36■■□□□ 1.17
TRAPPC8-210ENST00000582513 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC8-210ENST00000582513 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC8-210ENST00000582513 BIVM-ERCC5R4GMW8 1640 aa22.35■■□□□ 1.17
TRAPPC8-210ENST00000582513 CUX1P39880 1505 aa22.35■■□□□ 1.17
TRAPPC8-210ENST00000582513 BCANQ96GW7 911 aa22.35■■□□□ 1.17
TRAPPC8-210ENST00000582513 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
TRAPPC8-210ENST00000582513 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
TRAPPC8-210ENST00000582513 PRXQ9BXM0 1461 aa22.33■■□□□ 1.17
TRAPPC8-210ENST00000582513 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
TRAPPC8-210ENST00000582513 MIER1Q8N108 512 aa22.27■■□□□ 1.16
TRAPPC8-210ENST00000582513 HMGXB3Q12766 1538 aa22.27■■□□□ 1.16
TRAPPC8-210ENST00000582513 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
TRAPPC8-210ENST00000582513 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
TRAPPC8-210ENST00000582513 UBE2Q2Q8WVN8 375 aa22.24■■□□□ 1.15
TRAPPC8-210ENST00000582513 ITGAEP38570 1179 aa22.21■■□□□ 1.15
TRAPPC8-210ENST00000582513 CFTRP13569 1480 aa22.21■■□□□ 1.15
TRAPPC8-210ENST00000582513 RTN4Q9NQC3 1192 aaKnown RBP22.18■■□□□ 1.14
TRAPPC8-210ENST00000582513 DEKP35659 375 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms