RNA–Protein interactions for RNA: ENST00000580606.5

C19orf47-204, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3

Gene C19orf47, Length 803 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-204ENST00000580606 NISCHQ9Y2I1 1504 aa28.84■■■□□ 2.21
C19orf47-204ENST00000580606 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
C19orf47-204ENST00000580606 ABCC9O60706 1549 aa24.81■■□□□ 1.56
C19orf47-204ENST00000580606 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
C19orf47-204ENST00000580606 NACADO15069 1562 aa24.05■■□□□ 1.44
C19orf47-204ENST00000580606 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
C19orf47-204ENST00000580606 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
C19orf47-204ENST00000580606 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
C19orf47-204ENST00000580606 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
C19orf47-204ENST00000580606 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
C19orf47-204ENST00000580606 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
C19orf47-204ENST00000580606 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
C19orf47-204ENST00000580606 BICRAQ9NZM4 1560 aa23.18■■□□□ 1.3
C19orf47-204ENST00000580606 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
C19orf47-204ENST00000580606 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
C19orf47-204ENST00000580606 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
C19orf47-204ENST00000580606 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
C19orf47-204ENST00000580606 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
C19orf47-204ENST00000580606 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
C19orf47-204ENST00000580606 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
C19orf47-204ENST00000580606 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
C19orf47-204ENST00000580606 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
C19orf47-204ENST00000580606 SMARCA2P51531 1590 aa22.19■■□□□ 1.14
C19orf47-204ENST00000580606 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
C19orf47-204ENST00000580606 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
C19orf47-204ENST00000580606 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
C19orf47-204ENST00000580606 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
C19orf47-204ENST00000580606 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
C19orf47-204ENST00000580606 WIZO95785 1651 aa21.86■■□□□ 1.09
C19orf47-204ENST00000580606 TOP2AP11388 1531 aaKnown RBP21.73■■□□□ 1.07
C19orf47-204ENST00000580606 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
C19orf47-204ENST00000580606 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
C19orf47-204ENST00000580606 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
C19orf47-204ENST00000580606 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
C19orf47-204ENST00000580606 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
C19orf47-204ENST00000580606 NESP48681 1621 aa21.47■■□□□ 1.03
C19orf47-204ENST00000580606 CFTRP13569 1480 aa21.46■■□□□ 1.03
C19orf47-204ENST00000580606 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
C19orf47-204ENST00000580606 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
C19orf47-204ENST00000580606 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
C19orf47-204ENST00000580606 CUX2O14529 1486 aa21.2■□□□□ 0.98
C19orf47-204ENST00000580606 MRC2Q9UBG0 1479 aa21.16■□□□□ 0.98
C19orf47-204ENST00000580606 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
C19orf47-204ENST00000580606 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
C19orf47-204ENST00000580606 THOC2Q8NI27 1593 aaKnown RBP21.09■□□□□ 0.97
C19orf47-204ENST00000580606 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
C19orf47-204ENST00000580606 WDR62O43379 1518 aa21.05■□□□□ 0.96
C19orf47-204ENST00000580606 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
C19orf47-204ENST00000580606 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
C19orf47-204ENST00000580606 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
C19orf47-204ENST00000580606 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
C19orf47-204ENST00000580606 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
C19orf47-204ENST00000580606 CUX1P39880 1505 aa20.78■□□□□ 0.92
C19orf47-204ENST00000580606 SOGA1O94964 1423 aa20.76■□□□□ 0.91
C19orf47-204ENST00000580606 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
C19orf47-204ENST00000580606 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
C19orf47-204ENST00000580606 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
C19orf47-204ENST00000580606 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
C19orf47-204ENST00000580606 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
C19orf47-204ENST00000580606 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
C19orf47-204ENST00000580606 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
C19orf47-204ENST00000580606 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
C19orf47-204ENST00000580606 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
C19orf47-204ENST00000580606 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
C19orf47-204ENST00000580606 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
C19orf47-204ENST00000580606 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.884e-8■■■■□ 22.5
C19orf47-204ENST00000580606 TRIM41Q8WV44 630 aa20.48■□□□□ 0.87
C19orf47-204ENST00000580606 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
C19orf47-204ENST00000580606 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
C19orf47-204ENST00000580606 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
C19orf47-204ENST00000580606 OSCARQ8IYS5 282 aa20.46■□□□□ 0.87
C19orf47-204ENST00000580606 DNAJC5Q9H3Z4 198 aa20.46■□□□□ 0.87
C19orf47-204ENST00000580606 MAGI1Q96QZ7 1491 aaPredicted RBP20.4■□□□□ 0.86
C19orf47-204ENST00000580606 KIF27Q86VH2 1401 aa20.39■□□□□ 0.85
C19orf47-204ENST00000580606 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
C19orf47-204ENST00000580606 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
C19orf47-204ENST00000580606 FBLN2P98095 1184 aa20.35■□□□□ 0.85
C19orf47-204ENST00000580606 ERICH3Q5RHP9 1530 aa20.33■□□□□ 0.85
C19orf47-204ENST00000580606 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
C19orf47-204ENST00000580606 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
C19orf47-204ENST00000580606 IGF1RP08069 1367 aa20.31■□□□□ 0.84
C19orf47-204ENST00000580606 CHIC1Q5VXU3 224 aa20.29■□□□□ 0.84
C19orf47-204ENST00000580606 FHAD1B1AJZ9 1412 aa20.28■□□□□ 0.84
C19orf47-204ENST00000580606 PBRM1Q86U86 1689 aa20.24■□□□□ 0.83
C19orf47-204ENST00000580606 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
C19orf47-204ENST00000580606 GRIN2AQ12879 1464 aa20.17■□□□□ 0.82
C19orf47-204ENST00000580606 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
C19orf47-204ENST00000580606 EEA1Q15075 1411 aa20.14■□□□□ 0.81
C19orf47-204ENST00000580606 CHD1O14646 1710 aa20.13■□□□□ 0.81
C19orf47-204ENST00000580606 CUL7Q14999 1698 aa20.11■□□□□ 0.81
C19orf47-204ENST00000580606 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
C19orf47-204ENST00000580606 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
C19orf47-204ENST00000580606 NUP160Q12769 1436 aa20.1■□□□□ 0.81
C19orf47-204ENST00000580606 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
C19orf47-204ENST00000580606 CLASP1Q7Z460 1538 aa20.03■□□□□ 0.8
C19orf47-204ENST00000580606 JPH4Q96JJ6 628 aa20■□□□□ 0.79
C19orf47-204ENST00000580606 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
C19orf47-204ENST00000580606 KIAA0586Q9BVV6 1533 aa19.98■□□□□ 0.79
C19orf47-204ENST00000580606 CEP170Q5SW79 1584 aa19.97■□□□□ 0.79
C19orf47-204ENST00000580606 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms