RNA–Protein interactions for RNA: ENST00000578008.6

STRADA-207, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5 BASIC

Gene STRADA, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-207ENST00000578008 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
STRADA-207ENST00000578008 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
STRADA-207ENST00000578008 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
STRADA-207ENST00000578008 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
STRADA-207ENST00000578008 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
STRADA-207ENST00000578008 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
STRADA-207ENST00000578008 FOXD1Q16676 465 aa15.54■□□□□ 0.08
STRADA-207ENST00000578008 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
STRADA-207ENST00000578008 ADRA2BP18089 450 aa15.26■□□□□ 0.03
STRADA-207ENST00000578008 PIAS4Q8N2W9 510 aaPredicted RBP14.73□□□□□ -0.05
STRADA-207ENST00000578008 CCDC180Q9P1Z9 1646 aa14.45□□□□□ -0.1
STRADA-207ENST00000578008 KCNA4P22459 653 aa14.44□□□□□ -0.1
STRADA-207ENST00000578008 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
STRADA-207ENST00000578008 ABCC9O60706 1549 aa14.32□□□□□ -0.12
STRADA-207ENST00000578008 MSH5O43196 834 aa14.16□□□□□ -0.14
STRADA-207ENST00000578008 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
STRADA-207ENST00000578008 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
STRADA-207ENST00000578008 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
STRADA-207ENST00000578008 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
STRADA-207ENST00000578008 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
STRADA-207ENST00000578008 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
STRADA-207ENST00000578008 MAPK8IP2Q13387 824 aaPredicted RBP13.74□□□□□ -0.21
STRADA-207ENST00000578008 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.21
STRADA-207ENST00000578008 NACADO15069 1562 aa13.68□□□□□ -0.22
STRADA-207ENST00000578008 DCAF8L2P0C7V8 631 aa13.68□□□□□ -0.22
STRADA-207ENST00000578008 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
STRADA-207ENST00000578008 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
STRADA-207ENST00000578008 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
STRADA-207ENST00000578008 RNF216Q9NWF9 866 aaPredicted RBP13.48□□□□□ -0.25
STRADA-207ENST00000578008 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.25
STRADA-207ENST00000578008 DMRT2Q9Y5R5 561 aa13.46□□□□□ -0.25
STRADA-207ENST00000578008 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
STRADA-207ENST00000578008 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
STRADA-207ENST00000578008 UNC13AQ9UPW8 1703 aa13.35□□□□□ -0.27
STRADA-207ENST00000578008 ZBTB22O15209 634 aa13.33□□□□□ -0.28
STRADA-207ENST00000578008 HOXD11P31277 338 aaPredicted RBP13.33□□□□□ -0.28
STRADA-207ENST00000578008 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
STRADA-207ENST00000578008 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
STRADA-207ENST00000578008 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
STRADA-207ENST00000578008 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
STRADA-207ENST00000578008 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
STRADA-207ENST00000578008 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
STRADA-207ENST00000578008 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
STRADA-207ENST00000578008 POTEDQ86YR6 584 aa12.92□□□□□ -0.34
STRADA-207ENST00000578008 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
STRADA-207ENST00000578008 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
STRADA-207ENST00000578008 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
STRADA-207ENST00000578008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
STRADA-207ENST00000578008 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
STRADA-207ENST00000578008 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
STRADA-207ENST00000578008 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
STRADA-207ENST00000578008 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
STRADA-207ENST00000578008 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
STRADA-207ENST00000578008 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
STRADA-207ENST00000578008 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
STRADA-207ENST00000578008 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
STRADA-207ENST00000578008 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
STRADA-207ENST00000578008 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
STRADA-207ENST00000578008 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
STRADA-207ENST00000578008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
STRADA-207ENST00000578008 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
STRADA-207ENST00000578008 SAMD1Q6SPF0 538 aaPredicted RBP12.46□□□□□ -0.41
STRADA-207ENST00000578008 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
STRADA-207ENST00000578008 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
STRADA-207ENST00000578008 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
STRADA-207ENST00000578008 WIZO95785 1651 aa12.35□□□□□ -0.43
STRADA-207ENST00000578008 NESP48681 1621 aa12.34□□□□□ -0.43
STRADA-207ENST00000578008 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
STRADA-207ENST00000578008 CUX2O14529 1486 aa12.3□□□□□ -0.44
STRADA-207ENST00000578008 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
STRADA-207ENST00000578008 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
STRADA-207ENST00000578008 APLP2Q06481 763 aa12.24□□□□□ -0.45
STRADA-207ENST00000578008 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
STRADA-207ENST00000578008 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
STRADA-207ENST00000578008 FKBP8Q14318 412 aa12.19□□□□□ -0.46
STRADA-207ENST00000578008 RNF39Q9H2S5 420 aa12.19□□□□□ -0.46
STRADA-207ENST00000578008 CFTRP13569 1480 aa12.17□□□□□ -0.46
STRADA-207ENST00000578008 THOC2Q8NI27 1593 aaKnown RBP12.15□□□□□ -0.46
STRADA-207ENST00000578008 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
STRADA-207ENST00000578008 DNAJC5Q9H3Z4 198 aa12.13□□□□□ -0.47
STRADA-207ENST00000578008 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
STRADA-207ENST00000578008 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
STRADA-207ENST00000578008 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
STRADA-207ENST00000578008 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
STRADA-207ENST00000578008 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
STRADA-207ENST00000578008 WDR62O43379 1518 aa12.06□□□□□ -0.48
STRADA-207ENST00000578008 C1QBPQ07021 282 aaKnown RBP12.05□□□□□ -0.48
STRADA-207ENST00000578008 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
STRADA-207ENST00000578008 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
STRADA-207ENST00000578008 CAPN15O75808 1086 aa11.99□□□□□ -0.49
STRADA-207ENST00000578008 URB2Q14146 1524 aaKnown RBP11.99□□□□□ -0.49
STRADA-207ENST00000578008 SUPT5HO00267 1087 aaKnown RBP11.96□□□□□ -0.49
STRADA-207ENST00000578008 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
STRADA-207ENST00000578008 POLA2Q14181 598 aa11.93□□□□□ -0.5
STRADA-207ENST00000578008 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
STRADA-207ENST00000578008 TOPBP1Q92547 1522 aa11.9□□□□□ -0.5
STRADA-207ENST00000578008 IFT140Q96RY7 1462 aa11.88□□□□□ -0.51
STRADA-207ENST00000578008 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
STRADA-207ENST00000578008 FBLN2P98095 1184 aa11.85□□□□□ -0.51
STRADA-207ENST00000578008 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms