RNA–Protein interactions for RNA: ENST00000577913.1

BRIP1-203, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-203ENST00000577913 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
BRIP1-203ENST00000577913 CHIC1Q5VXU3 224 aa14.58□□□□□ -0.08
BRIP1-203ENST00000577913 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
BRIP1-203ENST00000577913 SENP3Q9H4L4 574 aaPredicted RBP12.49□□□□□ -0.41
BRIP1-203ENST00000577913 PLPPR3Q6T4P5 718 aa11.95□□□□□ -0.5
BRIP1-203ENST00000577913 NISCHQ9Y2I1 1504 aa11.95□□□□□ -0.5
BRIP1-203ENST00000577913 FOXD1Q16676 465 aa11.55□□□□□ -0.56
BRIP1-203ENST00000577913 ADRA2BP18089 450 aa11.26□□□□□ -0.61
BRIP1-203ENST00000577913 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
BRIP1-203ENST00000577913 PIAS4Q8N2W9 510 aaPredicted RBP10.97□□□□□ -0.65
BRIP1-203ENST00000577913 MSH5O43196 834 aa10.6□□□□□ -0.71
BRIP1-203ENST00000577913 PPP4R3CPQ6ZMV5 832 aa10.54□□□□□ -0.72
BRIP1-203ENST00000577913 KCNA4P22459 653 aa10.53□□□□□ -0.72
BRIP1-203ENST00000577913 CCDC180Q9P1Z9 1646 aa10.42□□□□□ -0.74
BRIP1-203ENST00000577913 NCBP3Q53F19 620 aaKnown RBP10.34□□□□□ -0.75
BRIP1-203ENST00000577913 SCAF1Q9H7N4 1312 aaKnown RBP10.33□□□□□ -0.76
BRIP1-203ENST00000577913 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
BRIP1-203ENST00000577913 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
BRIP1-203ENST00000577913 ABCC9O60706 1549 aa10.17□□□□□ -0.78
BRIP1-203ENST00000577913 NPM3O75607 178 aaKnown RBP10.17□□□□□ -0.78
BRIP1-203ENST00000577913 MAPK8IP2Q13387 824 aaPredicted RBP10.14□□□□□ -0.79
BRIP1-203ENST00000577913 SLC4A1APQ9BWU0 796 aaKnown RBP10.07□□□□□ -0.8
BRIP1-203ENST00000577913 EHMT2Q96KQ7 1210 aa10.03□□□□□ -0.8
BRIP1-203ENST00000577913 DMRT2Q9Y5R5 561 aa9.99□□□□□ -0.81
BRIP1-203ENST00000577913 ZCCHC6Q5VYS8 1495 aaKnown RBP9.98□□□□□ -0.81
BRIP1-203ENST00000577913 RNF216Q9NWF9 866 aaPredicted RBP9.95□□□□□ -0.82
BRIP1-203ENST00000577913 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
BRIP1-203ENST00000577913 HOXD11P31277 338 aaPredicted RBP9.85□□□□□ -0.83
BRIP1-203ENST00000577913 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
BRIP1-203ENST00000577913 DCAF1Q9Y4B6 1507 aa9.78□□□□□ -0.84
BRIP1-203ENST00000577913 NACADO15069 1562 aa9.78□□□□□ -0.84
BRIP1-203ENST00000577913 RB1CC1Q8TDY2 1594 aa9.78□□□□□ -0.84
BRIP1-203ENST00000577913 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.85
BRIP1-203ENST00000577913 SCRIBQ14160 1630 aa9.71□□□□□ -0.85
BRIP1-203ENST00000577913 MYO15BQ96JP2 1530 aa9.71□□□□□ -0.86
BRIP1-203ENST00000577913 ZBTB22O15209 634 aa9.68□□□□□ -0.86
BRIP1-203ENST00000577913 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
BRIP1-203ENST00000577913 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRIP1-203ENST00000577913 DCAF8L1A6NGE4 600 aa9.58□□□□□ -0.88
BRIP1-203ENST00000577913 SLC4A2P04920 1241 aa9.54□□□□□ -0.88
BRIP1-203ENST00000577913 UNC13AQ9UPW8 1703 aa9.48□□□□□ -0.89
BRIP1-203ENST00000577913 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
BRIP1-203ENST00000577913 BICRAQ9NZM4 1560 aa9.42□□□□□ -0.9
BRIP1-203ENST00000577913 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
BRIP1-203ENST00000577913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.42□□□□□ -0.92e-6■■■□□ 18.4
BRIP1-203ENST00000577913 POTEDQ86YR6 584 aa9.36□□□□□ -0.91
BRIP1-203ENST00000577913 CECR2Q9BXF3 1484 aa9.34□□□□□ -0.91
BRIP1-203ENST00000577913 ATXN8OSP0DMR3 200 aa9.27□□□□□ -0.93
BRIP1-203ENST00000577913 U3KPZ7 1027 aaPredicted RBP9.27□□□□□ -0.93
BRIP1-203ENST00000577913 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
BRIP1-203ENST00000577913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
BRIP1-203ENST00000577913 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
BRIP1-203ENST00000577913 BAZ1AQ9NRL2 1556 aaPredicted RBP9.24□□□□□ -0.93
BRIP1-203ENST00000577913 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
BRIP1-203ENST00000577913 SAMD1Q6SPF0 538 aaPredicted RBP9.22□□□□□ -0.93
BRIP1-203ENST00000577913 SMARCA4P51532 1647 aa9.21□□□□□ -0.93
BRIP1-203ENST00000577913 EIF4G1Q04637 1599 aaKnown RBP9.2□□□□□ -0.94
BRIP1-203ENST00000577913 WIZO95785 1651 aa9.18□□□□□ -0.94
BRIP1-203ENST00000577913 APLP2Q06481 763 aa9.12□□□□□ -0.95
BRIP1-203ENST00000577913 ATF5Q9Y2D1 282 aaPredicted RBP9.12□□□□□ -0.95
BRIP1-203ENST00000577913 ATAD2BQ9ULI0 1458 aa9.12□□□□□ -0.95
BRIP1-203ENST00000577913 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
BRIP1-203ENST00000577913 BAZ1BQ9UIG0 1483 aaKnown RBP9.11□□□□□ -0.95
BRIP1-203ENST00000577913 SMARCA2P51531 1590 aa9.1□□□□□ -0.95
BRIP1-203ENST00000577913 RNF39Q9H2S5 420 aa9.08□□□□□ -0.96
BRIP1-203ENST00000577913 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
BRIP1-203ENST00000577913 TOP2AP11388 1531 aaKnown RBP9.05□□□□□ -0.96
BRIP1-203ENST00000577913 NCAPD3P42695 1498 aa9.02□□□□□ -0.96
BRIP1-203ENST00000577913 PEG3Q9GZU2 1588 aa9.02□□□□□ -0.97
BRIP1-203ENST00000577913 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
BRIP1-203ENST00000577913 C1QBPQ07021 282 aaKnown RBP8.99□□□□□ -0.97
BRIP1-203ENST00000577913 HMGXB3Q12766 1538 aa8.99□□□□□ -0.97
BRIP1-203ENST00000577913 ZNF219Q9P2Y4 722 aaPredicted RBP8.97□□□□□ -0.97
BRIP1-203ENST00000577913 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
BRIP1-203ENST00000577913 CAPN15O75808 1086 aa8.94□□□□□ -0.98
BRIP1-203ENST00000577913 TRHP20396 242 aaPredicted RBP8.94□□□□□ -0.98
BRIP1-203ENST00000577913 FKBP8Q14318 412 aa8.86□□□□□ -0.99
BRIP1-203ENST00000577913 NESP48681 1621 aa8.85□□□□□ -0.99
BRIP1-203ENST00000577913 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
BRIP1-203ENST00000577913 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
BRIP1-203ENST00000577913 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
BRIP1-203ENST00000577913 TRIM41Q8WV44 630 aa8.84□□□□□ -0.99
BRIP1-203ENST00000577913 POLA2Q14181 598 aa8.82□□□□□ -1
BRIP1-203ENST00000577913 CFTRP13569 1480 aa8.8□□□□□ -1
BRIP1-203ENST00000577913 ABCC8Q09428 1581 aa8.79□□□□□ -1
BRIP1-203ENST00000577913 ABCB7O75027 752 aa8.78□□□□□ -1
BRIP1-203ENST00000577913 ERCC6Q03468 1493 aa8.77□□□□□ -1
BRIP1-203ENST00000577913 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1
BRIP1-203ENST00000577913 PDS5BQ9NTI5 1447 aa8.77□□□□□ -1.01
BRIP1-203ENST00000577913 FBLN2P98095 1184 aa8.76□□□□□ -1.01
BRIP1-203ENST00000577913 FAM9AQ8IZU1 332 aaPredicted RBP8.76□□□□□ -1.01
BRIP1-203ENST00000577913 LAMC3Q9Y6N6 1575 aa8.75□□□□□ -1.01
BRIP1-203ENST00000577913 WRNQ14191 1432 aaPredicted RBP eCLIP8.73□□□□□ -1.01
BRIP1-203ENST00000577913 CEP164Q9UPV0 1460 aa8.73□□□□□ -1.01
BRIP1-203ENST00000577913 MKRN4PQ13434 485 aaPredicted RBP8.73□□□□□ -1.01
BRIP1-203ENST00000577913 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-203ENST00000577913 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-203ENST00000577913 DSG3P32926 999 aa8.71□□□□□ -1.02
BRIP1-203ENST00000577913 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
BRIP1-203ENST00000577913 SYNJ1O43426 1573 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms