RNA–Protein interactions for RNA: ENST00000577760.1

RPL23-208, Transcript of ribosomal protein L23, humanhuman

Gene RPL23, Length 3,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23-208ENST00000577760 NISCHQ9Y2I1 1504 aa20.89■□□□□ 0.93
RPL23-208ENST00000577760 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
RPL23-208ENST00000577760 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
RPL23-208ENST00000577760 HRCP23327 699 aa18.28■□□□□ 0.52
RPL23-208ENST00000577760 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
RPL23-208ENST00000577760 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
RPL23-208ENST00000577760 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
RPL23-208ENST00000577760 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.49
RPL23-208ENST00000577760 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
RPL23-208ENST00000577760 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.45
RPL23-208ENST00000577760 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
RPL23-208ENST00000577760 TRIM26Q12899 539 aaPredicted RBP17.5■□□□□ 0.39
RPL23-208ENST00000577760 EHMT2Q96KQ7 1210 aa17.48■□□□□ 0.39
RPL23-208ENST00000577760 DCAF1Q9Y4B6 1507 aa17.46■□□□□ 0.39
RPL23-208ENST00000577760 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
RPL23-208ENST00000577760 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
RPL23-208ENST00000577760 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
RPL23-208ENST00000577760 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
RPL23-208ENST00000577760 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
RPL23-208ENST00000577760 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
RPL23-208ENST00000577760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17■□□□□ 0.31
RPL23-208ENST00000577760 TTBK1Q5TCY1 1321 aaPredicted RBP16.98■□□□□ 0.31
RPL23-208ENST00000577760 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
RPL23-208ENST00000577760 NEUROD1Q13562 356 aa16.91■□□□□ 0.3
RPL23-208ENST00000577760 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
RPL23-208ENST00000577760 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.29
RPL23-208ENST00000577760 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
RPL23-208ENST00000577760 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
RPL23-208ENST00000577760 ABCC9O60706 1549 aa16.76■□□□□ 0.27
RPL23-208ENST00000577760 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
RPL23-208ENST00000577760 SCRIBQ14160 1630 aa16.75■□□□□ 0.27
RPL23-208ENST00000577760 YTHDC1Q96MU7 727 aaKnown RBP16.7■□□□□ 0.26
RPL23-208ENST00000577760 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
RPL23-208ENST00000577760 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
RPL23-208ENST00000577760 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
RPL23-208ENST00000577760 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
RPL23-208ENST00000577760 UBTFP17480 764 aaKnown RBP16.4■□□□□ 0.22
RPL23-208ENST00000577760 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
RPL23-208ENST00000577760 MIER1Q8N108 512 aa16.38■□□□□ 0.21
RPL23-208ENST00000577760 WIZO95785 1651 aa16.36■□□□□ 0.21
RPL23-208ENST00000577760 MYT1Q01538 1121 aa16.32■□□□□ 0.2
RPL23-208ENST00000577760 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
RPL23-208ENST00000577760 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
RPL23-208ENST00000577760 ABCC8Q09428 1581 aa16.28■□□□□ 0.2
RPL23-208ENST00000577760 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
RPL23-208ENST00000577760 SOGA1O94964 1423 aa16.24■□□□□ 0.19
RPL23-208ENST00000577760 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
RPL23-208ENST00000577760 RUSC2Q8N2Y8 1516 aa16.16■□□□□ 0.18
RPL23-208ENST00000577760 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
RPL23-208ENST00000577760 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
RPL23-208ENST00000577760 APLP2Q06481 763 aa16.07■□□□□ 0.16
RPL23-208ENST00000577760 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
RPL23-208ENST00000577760 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
RPL23-208ENST00000577760 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
RPL23-208ENST00000577760 NACADO15069 1562 aa15.97■□□□□ 0.15
RPL23-208ENST00000577760 GOLGA3Q08378 1498 aa15.96■□□□□ 0.14
RPL23-208ENST00000577760 BCANQ96GW7 911 aa15.93■□□□□ 0.14
RPL23-208ENST00000577760 CLIP1P30622 1438 aa15.92■□□□□ 0.14
RPL23-208ENST00000577760 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
RPL23-208ENST00000577760 ITGAEP38570 1179 aa15.9■□□□□ 0.14
RPL23-208ENST00000577760 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
RPL23-208ENST00000577760 PABPN1Q86U42 306 aaKnown RBP eCLIP15.87■□□□□ 0.13
RPL23-208ENST00000577760 EEA1Q15075 1411 aa15.87■□□□□ 0.13
RPL23-208ENST00000577760 KCNH8Q96L42 1107 aa15.86■□□□□ 0.13
RPL23-208ENST00000577760 TSHZ2Q9NRE2 1034 aa15.84■□□□□ 0.13
RPL23-208ENST00000577760 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
RPL23-208ENST00000577760 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
RPL23-208ENST00000577760 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
RPL23-208ENST00000577760 DHX57Q6P158 1386 aaKnown RBP15.76■□□□□ 0.11
RPL23-208ENST00000577760 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
RPL23-208ENST00000577760 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
RPL23-208ENST00000577760 ANP32EQ9BTT0 268 aa15.73■□□□□ 0.11
RPL23-208ENST00000577760 FKBP8Q14318 412 aa15.71■□□□□ 0.11
RPL23-208ENST00000577760 SYNJ1O43426 1573 aa15.69■□□□□ 0.1
RPL23-208ENST00000577760 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
RPL23-208ENST00000577760 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
RPL23-208ENST00000577760 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
RPL23-208ENST00000577760 KIF21BO75037 1637 aa15.65■□□□□ 0.1
RPL23-208ENST00000577760 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
RPL23-208ENST00000577760 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
RPL23-208ENST00000577760 SIN3AQ96ST3 1273 aa15.58■□□□□ 0.08
RPL23-208ENST00000577760 NEFLP07196 543 aa15.56■□□□□ 0.08
RPL23-208ENST00000577760 BAZ1BQ9UIG0 1483 aaKnown RBP15.53■□□□□ 0.08
RPL23-208ENST00000577760 ATP1B4Q9UN42 357 aaPredicted RBP15.53■□□□□ 0.08
RPL23-208ENST00000577760 RBM19Q9Y4C8 960 aaKnown RBP15.52■□□□□ 0.07
RPL23-208ENST00000577760 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
RPL23-208ENST00000577760 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
RPL23-208ENST00000577760 ARAP1Q96P48 1450 aa15.5■□□□□ 0.07
RPL23-208ENST00000577760 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
RPL23-208ENST00000577760 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
RPL23-208ENST00000577760 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
RPL23-208ENST00000577760 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
RPL23-208ENST00000577760 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
RPL23-208ENST00000577760 ANP32CO43423 234 aa15.41■□□□□ 0.06
RPL23-208ENST00000577760 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
RPL23-208ENST00000577760 ATAD2BQ9ULI0 1458 aa15.37■□□□□ 0.05
RPL23-208ENST00000577760 PPP1R15AO75807 674 aaPredicted RBP15.35■□□□□ 0.05
RPL23-208ENST00000577760 MSH5O43196 834 aa15.35■□□□□ 0.05
RPL23-208ENST00000577760 PRXQ9BXM0 1461 aa15.35■□□□□ 0.05
RPL23-208ENST00000577760 MAPKBP1O60336 1514 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms