RNA–Protein interactions for RNA: ENST00000577439.1

LINC00667-201, long intergenic non-protein coding RNA 667, humanhuman

TSL 1 (best)

Gene LINC00667, Length 3,372 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00667-201ENST00000577439 CHIC1Q5VXU3 224 aa13.78□□□□□ -0.2
LINC00667-201ENST00000577439 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
LINC00667-201ENST00000577439 NISCHQ9Y2I1 1504 aa12.96□□□□□ -0.34
LINC00667-201ENST00000577439 SLC24A1O60721 1099 aa12.53□□□□□ -0.4
LINC00667-201ENST00000577439 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
LINC00667-201ENST00000577439 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
LINC00667-201ENST00000577439 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
LINC00667-201ENST00000577439 KCNA4P22459 653 aa11.77□□□□□ -0.53
LINC00667-201ENST00000577439 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
LINC00667-201ENST00000577439 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
LINC00667-201ENST00000577439 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
LINC00667-201ENST00000577439 ADRA2BP18089 450 aa11.26□□□□□ -0.61
LINC00667-201ENST00000577439 SLC4A1APQ9BWU0 796 aaKnown RBP11.23□□□□□ -0.61
LINC00667-201ENST00000577439 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
LINC00667-201ENST00000577439 CCDC180Q9P1Z9 1646 aa11.11□□□□□ -0.63
LINC00667-201ENST00000577439 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
LINC00667-201ENST00000577439 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
LINC00667-201ENST00000577439 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
LINC00667-201ENST00000577439 ZBTB22O15209 634 aa10.96□□□□□ -0.65
LINC00667-201ENST00000577439 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
LINC00667-201ENST00000577439 SUPT5HO00267 1087 aaKnown RBP10.83□□□□□ -0.68
LINC00667-201ENST00000577439 PPP6R1Q9UPN7 881 aa10.73□□□□□ -0.69
LINC00667-201ENST00000577439 MYO15BQ96JP2 1530 aa10.7□□□□□ -0.7
LINC00667-201ENST00000577439 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
LINC00667-201ENST00000577439 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
LINC00667-201ENST00000577439 DCAF1Q9Y4B6 1507 aa10.67□□□□□ -0.7
LINC00667-201ENST00000577439 SENP3Q9H4L4 574 aaPredicted RBP10.67□□□□□ -0.7
LINC00667-201ENST00000577439 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
LINC00667-201ENST00000577439 PELP1Q8IZL8 1130 aaKnown RBP10.56□□□□□ -0.72
LINC00667-201ENST00000577439 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
LINC00667-201ENST00000577439 TPRNQ4KMQ1 711 aa10.55□□□□□ -0.72
LINC00667-201ENST00000577439 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
LINC00667-201ENST00000577439 HRCP23327 699 aa10.52□□□□□ -0.72
LINC00667-201ENST00000577439 BCANQ96GW7 911 aa10.52□□□□□ -0.72
LINC00667-201ENST00000577439 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
LINC00667-201ENST00000577439 PPP4R3CPQ6ZMV5 832 aa10.5□□□□□ -0.73
LINC00667-201ENST00000577439 FKBP8Q14318 412 aa10.49□□□□□ -0.73
LINC00667-201ENST00000577439 HAP1P54257 671 aaPredicted RBP10.46□□□□□ -0.73
LINC00667-201ENST00000577439 ARXQ96QS3 562 aa10.45□□□□□ -0.74
LINC00667-201ENST00000577439 ABCC9O60706 1549 aa10.45□□□□□ -0.74
LINC00667-201ENST00000577439 PCGF6Q9BYE7 350 aa10.39□□□□□ -0.75
LINC00667-201ENST00000577439 UNC13AQ9UPW8 1703 aa10.35□□□□□ -0.75
LINC00667-201ENST00000577439 MYT1Q01538 1121 aa10.31□□□□□ -0.76
LINC00667-201ENST00000577439 SCRIBQ14160 1630 aa10.29□□□□□ -0.76
LINC00667-201ENST00000577439 LOC105371045A0A1W2PR82 267 aa10.28□□□□□ -0.76
LINC00667-201ENST00000577439 RB1CC1Q8TDY2 1594 aa10.27□□□□□ -0.76
LINC00667-201ENST00000577439 NACADO15069 1562 aa10.27□□□□□ -0.77
LINC00667-201ENST00000577439 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
LINC00667-201ENST00000577439 PPARGC1BQ86YN6 1023 aaKnown RBP10.25□□□□□ -0.77
LINC00667-201ENST00000577439 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
LINC00667-201ENST00000577439 GTF3C3Q9Y5Q9 886 aa10.21□□□□□ -0.78
LINC00667-201ENST00000577439 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
LINC00667-201ENST00000577439 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
LINC00667-201ENST00000577439 HOMEZQ8IX15 550 aa10.18□□□□□ -0.78
LINC00667-201ENST00000577439 FBLN2P98095 1184 aa10.16□□□□□ -0.78
LINC00667-201ENST00000577439 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
LINC00667-201ENST00000577439 BICRAQ9NZM4 1560 aa10.11□□□□□ -0.79
LINC00667-201ENST00000577439 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
LINC00667-201ENST00000577439 MROH2BQ7Z745 1585 aa10.07□□□□□ -0.8
LINC00667-201ENST00000577439 CECR2Q9BXF3 1484 aa10.06□□□□□ -0.8
LINC00667-201ENST00000577439 WIZO95785 1651 aa10.04□□□□□ -0.8
LINC00667-201ENST00000577439 ZEB1P37275 1124 aaPredicted RBP10.03□□□□□ -0.8
LINC00667-201ENST00000577439 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
LINC00667-201ENST00000577439 FOXD1Q16676 465 aa10.03□□□□□ -0.8
LINC00667-201ENST00000577439 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
LINC00667-201ENST00000577439 BAZ1AQ9NRL2 1556 aaPredicted RBP10.03□□□□□ -0.8
LINC00667-201ENST00000577439 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
LINC00667-201ENST00000577439 FAM9AQ8IZU1 332 aaPredicted RBP9.99□□□□□ -0.81
LINC00667-201ENST00000577439 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
LINC00667-201ENST00000577439 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.81
LINC00667-201ENST00000577439 SCAF1Q9H7N4 1312 aaKnown RBP9.9□□□□□ -0.82
LINC00667-201ENST00000577439 TOP2AP11388 1531 aaKnown RBP9.9□□□□□ -0.82
LINC00667-201ENST00000577439 C14orf37Q86TY3 774 aa9.89□□□□□ -0.83
LINC00667-201ENST00000577439 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
LINC00667-201ENST00000577439 SMARCA2P51531 1590 aa9.85□□□□□ -0.83
LINC00667-201ENST00000577439 ABCC8Q09428 1581 aa9.84□□□□□ -0.83
LINC00667-201ENST00000577439 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
LINC00667-201ENST00000577439 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
LINC00667-201ENST00000577439 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
LINC00667-201ENST00000577439 CCDC88BA6NC98 1476 aa9.81□□□□□ -0.84
LINC00667-201ENST00000577439 APLP2Q06481 763 aa9.8□□□□□ -0.84
LINC00667-201ENST00000577439 PAXIP1Q6ZW49 1069 aaPredicted RBP9.79□□□□□ -0.84
LINC00667-201ENST00000577439 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
LINC00667-201ENST00000577439 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
LINC00667-201ENST00000577439 TSHZ2Q9NRE2 1034 aa9.76□□□□□ -0.85
LINC00667-201ENST00000577439 DNAJC5BQ9UF47 199 aa9.75□□□□□ -0.85
LINC00667-201ENST00000577439 PKD2Q13563 968 aa9.75□□□□□ -0.85
LINC00667-201ENST00000577439 NPM1P06748 294 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00667-201ENST00000577439 EEA1Q15075 1411 aa9.74□□□□□ -0.85
LINC00667-201ENST00000577439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
LINC00667-201ENST00000577439 TNIKQ9UKE5 1360 aa9.73□□□□□ -0.85
LINC00667-201ENST00000577439 SOGA1O94964 1423 aa9.73□□□□□ -0.85
LINC00667-201ENST00000577439 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
LINC00667-201ENST00000577439 CC2D2AQ9P2K1 1620 aa9.72□□□□□ -0.85
LINC00667-201ENST00000577439 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
LINC00667-201ENST00000577439 NPM2Q86SE8 214 aaKnown RBP9.72□□□□□ -0.85
LINC00667-201ENST00000577439 UBTFP17480 764 aaKnown RBP9.71□□□□□ -0.86
LINC00667-201ENST00000577439 PEG3Q9GZU2 1588 aa9.7□□□□□ -0.86
LINC00667-201ENST00000577439 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
LINC00667-201ENST00000577439 RUSC2Q8N2Y8 1516 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms