RNA–Protein interactions for RNA: ENST00000576351.5

TRPV1-209, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 5 BASIC

Gene TRPV1, Length 2,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-209ENST00000576351 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
TRPV1-209ENST00000576351 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
TRPV1-209ENST00000576351 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
TRPV1-209ENST00000576351 SHROOM4Q9ULL8 1493 aa23.46■■□□□ 1.35
TRPV1-209ENST00000576351 DCAF8L2P0C7V8 631 aa22.98■■□□□ 1.27
TRPV1-209ENST00000576351 SUPT5HO00267 1087 aaKnown RBP22.9■■□□□ 1.26
TRPV1-209ENST00000576351 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
TRPV1-209ENST00000576351 MYO15BQ96JP2 1530 aa22.29■■□□□ 1.16
TRPV1-209ENST00000576351 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
TRPV1-209ENST00000576351 SCRIBQ14160 1630 aa22.18■■□□□ 1.14
TRPV1-209ENST00000576351 ABCC9O60706 1549 aa22.12■■□□□ 1.13
TRPV1-209ENST00000576351 HRCP23327 699 aa22.06■■□□□ 1.12
TRPV1-209ENST00000576351 NACADO15069 1562 aa22.01■■□□□ 1.11
TRPV1-209ENST00000576351 PELP1Q8IZL8 1130 aaKnown RBP21.98■■□□□ 1.11
TRPV1-209ENST00000576351 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
TRPV1-209ENST00000576351 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
TRPV1-209ENST00000576351 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
TRPV1-209ENST00000576351 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
TRPV1-209ENST00000576351 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
TRPV1-209ENST00000576351 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
TRPV1-209ENST00000576351 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.03
TRPV1-209ENST00000576351 WIZO95785 1651 aa21.47■■□□□ 1.03
TRPV1-209ENST00000576351 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
TRPV1-209ENST00000576351 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
TRPV1-209ENST00000576351 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
TRPV1-209ENST00000576351 MYT1Q01538 1121 aa21.28■■□□□ 1
TRPV1-209ENST00000576351 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
TRPV1-209ENST00000576351 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
TRPV1-209ENST00000576351 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
TRPV1-209ENST00000576351 EIF4G1Q04637 1599 aaKnown RBP21.13■□□□□ 0.97
TRPV1-209ENST00000576351 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
TRPV1-209ENST00000576351 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
TRPV1-209ENST00000576351 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.973e-7■■■■□ 25.8
TRPV1-209ENST00000576351 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
TRPV1-209ENST00000576351 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
TRPV1-209ENST00000576351 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
TRPV1-209ENST00000576351 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
TRPV1-209ENST00000576351 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
TRPV1-209ENST00000576351 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
TRPV1-209ENST00000576351 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
TRPV1-209ENST00000576351 SOGA1O94964 1423 aa20.67■□□□□ 0.9
TRPV1-209ENST00000576351 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
TRPV1-209ENST00000576351 ZEB1P37275 1124 aaPredicted RBP20.63■□□□□ 0.89
TRPV1-209ENST00000576351 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
TRPV1-209ENST00000576351 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
TRPV1-209ENST00000576351 EEA1Q15075 1411 aa20.55■□□□□ 0.88
TRPV1-209ENST00000576351 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
TRPV1-209ENST00000576351 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
TRPV1-209ENST00000576351 TNIKQ9UKE5 1360 aa20.48■□□□□ 0.87
TRPV1-209ENST00000576351 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
TRPV1-209ENST00000576351 ACIN1Q9UKV3 1341 aaKnown RBP20.46■□□□□ 0.87
TRPV1-209ENST00000576351 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
TRPV1-209ENST00000576351 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
TRPV1-209ENST00000576351 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
TRPV1-209ENST00000576351 NEUROD1Q13562 356 aa20.35■□□□□ 0.85
TRPV1-209ENST00000576351 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
TRPV1-209ENST00000576351 GTF3C3Q9Y5Q9 886 aa20.29■□□□□ 0.84
TRPV1-209ENST00000576351 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
TRPV1-209ENST00000576351 KIF21BO75037 1637 aa20.29■□□□□ 0.84
TRPV1-209ENST00000576351 TOP2BQ02880 1626 aa20.28■□□□□ 0.84
TRPV1-209ENST00000576351 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
TRPV1-209ENST00000576351 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
TRPV1-209ENST00000576351 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
TRPV1-209ENST00000576351 CFTRP13569 1480 aa20.14■□□□□ 0.82
TRPV1-209ENST00000576351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.14■□□□□ 0.82
TRPV1-209ENST00000576351 CENPBP07199 599 aaPredicted RBP20.13■□□□□ 0.81
TRPV1-209ENST00000576351 CUX1P39880 1505 aa20.13■□□□□ 0.81
TRPV1-209ENST00000576351 CLIP1P30622 1438 aa20.13■□□□□ 0.81
TRPV1-209ENST00000576351 CCER1Q8TC90 406 aaPredicted RBP20.06■□□□□ 0.8
TRPV1-209ENST00000576351 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
TRPV1-209ENST00000576351 VPS8Q8N3P4 1428 aa20.03■□□□□ 0.8
TRPV1-209ENST00000576351 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
TRPV1-209ENST00000576351 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
TRPV1-209ENST00000576351 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
TRPV1-209ENST00000576351 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
TRPV1-209ENST00000576351 CADPSQ9ULU8 1353 aa19.94■□□□□ 0.78
TRPV1-209ENST00000576351 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
TRPV1-209ENST00000576351 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
TRPV1-209ENST00000576351 APLP2Q06481 763 aa19.86■□□□□ 0.77
TRPV1-209ENST00000576351 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
TRPV1-209ENST00000576351 CUX2O14529 1486 aa19.81■□□□□ 0.76
TRPV1-209ENST00000576351 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
TRPV1-209ENST00000576351 BCL11AQ9H165 835 aa19.79■□□□□ 0.76
TRPV1-209ENST00000576351 IGF1RP08069 1367 aa19.78■□□□□ 0.76
TRPV1-209ENST00000576351 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
TRPV1-209ENST00000576351 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
TRPV1-209ENST00000576351 ARHGAP35Q9NRY4 1499 aa19.72■□□□□ 0.75
TRPV1-209ENST00000576351 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
TRPV1-209ENST00000576351 CARMIL1Q5VZK9 1371 aa19.68■□□□□ 0.74
TRPV1-209ENST00000576351 NESP48681 1621 aa19.66■□□□□ 0.74
TRPV1-209ENST00000576351 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
TRPV1-209ENST00000576351 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
TRPV1-209ENST00000576351 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
TRPV1-209ENST00000576351 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
TRPV1-209ENST00000576351 ZNF316A6NFI3 1004 aaPredicted RBP19.6■□□□□ 0.73
TRPV1-209ENST00000576351 POLA1P09884 1462 aaPredicted RBP19.59■□□□□ 0.73
TRPV1-209ENST00000576351 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
TRPV1-209ENST00000576351 RRBP1Q9P2E9 1410 aaKnown RBP19.55■□□□□ 0.72
TRPV1-209ENST00000576351 ANP32EQ9BTT0 268 aa19.54■□□□□ 0.72
TRPV1-209ENST00000576351 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms