RNA–Protein interactions for RNA: ENST00000574953.5

RPH3AL-215, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS ALT2 TSL 5

Gene RPH3AL, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-215ENST00000574953 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.71■□□□□ 0.437e-11■□□□□ 8.4
RPH3AL-215ENST00000574953 SF3A3Q12874 501 aaKnown RBP eCLIP14.12□□□□□ -0.155e-9■■■□□ 18.5
RPH3AL-215ENST00000574953 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.9□□□□□ -0.027e-9■■■■■ 72.6
RPH3AL-215ENST00000574953 SF3B4Q15427 424 aaKnown RBP eCLIP14.34□□□□□ -0.112e-8■■■□□ 15.3
RPH3AL-215ENST00000574953 DDX6P26196 483 aaKnown RBP eCLIP16.68■□□□□ 0.262e-8■■■■■ 51.7
RPH3AL-215ENST00000574953 PPIGQ13427 754 aaKnown RBP eCLIP17.83■□□□□ 0.446e-8■■■□□ 18.3
RPH3AL-215ENST00000574953 HNRNPKP61978 463 aaKnown RBP eCLIP15.74■□□□□ 0.111e-7■■■■■ 33.4
RPH3AL-215ENST00000574953 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.53■□□□□ 0.562e-7■■■■□ 23.1
RPH3AL-215ENST00000574953 FUSP35637 526 aaKnown RBP eCLIP10.41□□□□□ -0.742e-7■■■□□ 15.9
RPH3AL-215ENST00000574953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.82■■□□□ 1.43e-7■□□□□ 9.5
RPH3AL-215ENST00000574953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.88■■□□□ 1.413e-7■■■■□ 26
RPH3AL-215ENST00000574953 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.49□□□□□ -0.094e-7■□□□□ 10.1
RPH3AL-215ENST00000574953 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.325e-7■■■■■ 30.5
RPH3AL-215ENST00000574953 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.72□□□□□ -0.056e-7■■■■□ 20.6
RPH3AL-215ENST00000574953 PCBP2Q15366 365 aaKnown RBP eCLIP14.82□□□□□ -0.046e-7■■■■■ 31.8
RPH3AL-215ENST00000574953 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.84■□□□□ 0.298e-7■■■□□ 18.1
RPH3AL-215ENST00000574953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.25■□□□□ 0.518e-7■■■■■ 52
RPH3AL-215ENST00000574953 ZC3H11AO75152 810 aaKnown RBP eCLIP17.26■□□□□ 0.359e-7■■■■□ 25.3
RPH3AL-215ENST00000574953 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.329e-7■■■■□ 25.2
RPH3AL-215ENST00000574953 SAFBQ15424 915 aaKnown RBP eCLIP17.8■□□□□ 0.441e-6■■■■■ 28.5
RPH3AL-215ENST00000574953 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■■■■ 82.6
RPH3AL-215ENST00000574953 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■□□□□ 10.9
RPH3AL-215ENST00000574953 EFTUD2Q15029 972 aaKnown RBP eCLIP14.99□□□□□ -0.011e-6■■■■□ 22
RPH3AL-215ENST00000574953 PRPF4O43172 522 aaKnown RBP eCLIP15.02■□□□□ -01e-6■■■■□ 19.9
RPH3AL-215ENST00000574953 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.17□□□□□ -0.142e-6■■■■■ 34.4
RPH3AL-215ENST00000574953 NKRFO15226 690 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■□□□□ 11
RPH3AL-215ENST00000574953 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.333e-6■■■■■ 137.9
RPH3AL-215ENST00000574953 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.3■□□□□ 0.24e-6■■■□□ 18.8
RPH3AL-215ENST00000574953 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.33■□□□□ 0.524e-6■■■■□ 22.6
RPH3AL-215ENST00000574953 MATR3P43243 847 aaKnown RBP eCLIP17.25■□□□□ 0.356e-6■■□□□ 12.4
RPH3AL-215ENST00000574953 HLTFQ14527 1009 aaKnown RBP eCLIP15.48■□□□□ 0.078e-6■■■■□ 21.3
Retrieved 31 of 31 RNA–protein pairs in 8.7 ms