RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 NISCHQ9Y2I1 1504 aa47.73■■■■■ 5.23
ABR-231ENST00000574875 CCDC180Q9P1Z9 1646 aa42.53■■■■■ 4.4
ABR-231ENST00000574875 ABCC9O60706 1549 aa42.1■■■■■ 4.33
ABR-231ENST00000574875 RB1CC1Q8TDY2 1594 aa40.28■■■■■ 4.04
ABR-231ENST00000574875 DCAF8L2P0C7V8 631 aa40.23■■■■■ 4.03
ABR-231ENST00000574875 NACADO15069 1562 aa40.14■■■■■ 4.02
ABR-231ENST00000574875 MYO15BQ96JP2 1530 aa39.75■■■■□ 3.95
ABR-231ENST00000574875 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
ABR-231ENST00000574875 DCAF1Q9Y4B6 1507 aa39.44■■■■□ 3.9
ABR-231ENST00000574875 PABPN1Q86U42 306 aaKnown RBP eCLIP39.35■■■■□ 3.89
ABR-231ENST00000574875 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
ABR-231ENST00000574875 DNAJC5BQ9UF47 199 aa39.08■■■■□ 3.85
ABR-231ENST00000574875 BICRAQ9NZM4 1560 aa39.06■■■■□ 3.84
ABR-231ENST00000574875 SCRIBQ14160 1630 aa38.81■■■■□ 3.8
ABR-231ENST00000574875 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.76
ABR-231ENST00000574875 EIF4G1Q04637 1599 aaKnown RBP38.06■■■■□ 3.68
ABR-231ENST00000574875 CC2D2AQ9P2K1 1620 aa38.03■■■■□ 3.68
ABR-231ENST00000574875 CECR2Q9BXF3 1484 aa37.86■■■■□ 3.65
ABR-231ENST00000574875 SMARCA4P51532 1647 aa37.09■■■■□ 3.53
ABR-231ENST00000574875 NCAPD3P42695 1498 aa37.07■■■■□ 3.53
ABR-231ENST00000574875 ATAD2BQ9ULI0 1458 aa37.03■■■■□ 3.52
ABR-231ENST00000574875 BAZ1AQ9NRL2 1556 aaPredicted RBP37■■■■□ 3.51
ABR-231ENST00000574875 SMARCA2P51531 1590 aa36.94■■■■□ 3.5
ABR-231ENST00000574875 HMGXB3Q12766 1538 aa36.79■■■■□ 3.48
ABR-231ENST00000574875 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
ABR-231ENST00000574875 PEG3Q9GZU2 1588 aa36.71■■■■□ 3.47
ABR-231ENST00000574875 BAZ1BQ9UIG0 1483 aaKnown RBP36.69■■■■□ 3.46
ABR-231ENST00000574875 WIZO95785 1651 aa36.36■■■■□ 3.41
ABR-231ENST00000574875 ERCC6Q03468 1493 aa36.31■■■■□ 3.4
ABR-231ENST00000574875 NESP48681 1621 aa36.3■■■■□ 3.4
ABR-231ENST00000574875 RSF1Q96T23 1441 aaPredicted RBP36.25■■■■□ 3.39
ABR-231ENST00000574875 LAMC3Q9Y6N6 1575 aa36.12■■■■□ 3.37
ABR-231ENST00000574875 CUX2O14529 1486 aa36.03■■■■□ 3.36
ABR-231ENST00000574875 CADPSQ9ULU8 1353 aa36■■■■□ 3.35
ABR-231ENST00000574875 PDS5BQ9NTI5 1447 aa35.95■■■■□ 3.35
ABR-231ENST00000574875 TOP2AP11388 1531 aaKnown RBP35.92■■■■□ 3.34
ABR-231ENST00000574875 KIF21AQ7Z4S6 1674 aa35.81■■■■□ 3.32
ABR-231ENST00000574875 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.31
ABR-231ENST00000574875 DNAJC5Q9H3Z4 198 aa35.68■■■■□ 3.3
ABR-231ENST00000574875 CFTRP13569 1480 aa35.67■■■■□ 3.3
ABR-231ENST00000574875 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
ABR-231ENST00000574875 FANCD2Q9BXW9 1451 aa35.55■■■■□ 3.28
ABR-231ENST00000574875 MRC2Q9UBG0 1479 aa35.55■■■■□ 3.28
ABR-231ENST00000574875 CEP164Q9UPV0 1460 aa35.53■■■■□ 3.28
ABR-231ENST00000574875 WDR62O43379 1518 aa35.42■■■■□ 3.26
ABR-231ENST00000574875 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
ABR-231ENST00000574875 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
ABR-231ENST00000574875 SUPT5HO00267 1087 aaKnown RBP35.15■■■■□ 3.22
ABR-231ENST00000574875 ABCC8Q09428 1581 aa34.94■■■■□ 3.18
ABR-231ENST00000574875 TOPBP1Q92547 1522 aa34.93■■■■□ 3.18
ABR-231ENST00000574875 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
ABR-231ENST00000574875 IFT140Q96RY7 1462 aa34.81■■■■□ 3.16
ABR-231ENST00000574875 ZNF608Q9ULD9 1512 aaPredicted RBP34.7■■■■□ 3.14
ABR-231ENST00000574875 OSCARQ8IYS5 282 aa34.61■■■■□ 3.13
ABR-231ENST00000574875 POLA1P09884 1462 aaPredicted RBP34.6■■■■□ 3.13
ABR-231ENST00000574875 TARBP1Q13395 1621 aaKnown RBP34.55■■■■□ 3.12
ABR-231ENST00000574875 SOGA1O94964 1423 aa34.53■■■■□ 3.12
ABR-231ENST00000574875 CUX1P39880 1505 aa34.52■■■■□ 3.12
ABR-231ENST00000574875 AQRO60306 1485 aaKnown RBP eCLIP34.5■■■■□ 3.11
ABR-231ENST00000574875 RAD54L2Q9Y4B4 1467 aa34.5■■■■□ 3.11
ABR-231ENST00000574875 EIF4G3O43432 1585 aaKnown RBP34.48■■■■□ 3.11
ABR-231ENST00000574875 FGD5Q6ZNL6 1462 aa34.47■■■■□ 3.11
ABR-231ENST00000574875 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
ABR-231ENST00000574875 FBLN2P98095 1184 aa34.24■■■■□ 3.07
ABR-231ENST00000574875 WDR97A6NE52 1622 aa34.22■■■■□ 3.07
ABR-231ENST00000574875 TRIM41Q8WV44 630 aa34.19■■■■□ 3.06
ABR-231ENST00000574875 WRNQ14191 1432 aaPredicted RBP eCLIP34.18■■■■□ 3.06
ABR-231ENST00000574875 CHD1O14646 1710 aa34.14■■■■□ 3.06
ABR-231ENST00000574875 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
ABR-231ENST00000574875 ABCA10Q8WWZ4 1543 aa34.11■■■■□ 3.05
ABR-231ENST00000574875 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
ABR-231ENST00000574875 TOP2BQ02880 1626 aa34.1■■■■□ 3.05
ABR-231ENST00000574875 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
ABR-231ENST00000574875 GAPVD1Q14C86 1478 aa34.08■■■■□ 3.05
ABR-231ENST00000574875 CHMP7Q8WUX9 453 aaPredicted RBP34.07■■■■□ 3.04
ABR-231ENST00000574875 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
ABR-231ENST00000574875 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
ABR-231ENST00000574875 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
ABR-231ENST00000574875 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
ABR-231ENST00000574875 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
ABR-231ENST00000574875 PBRM1Q86U86 1689 aa33.96■■■■□ 3.03
ABR-231ENST00000574875 ABCA5Q8WWZ7 1642 aa33.96■■■■□ 3.03
ABR-231ENST00000574875 SYNJ2O15056 1496 aa33.93■■■■□ 3.02
ABR-231ENST00000574875 ARHGEF11O15085 1522 aa33.92■■■■□ 3.02
ABR-231ENST00000574875 CYB5RLQ6IPT4 315 aa33.76■■■□□ 2.99
ABR-231ENST00000574875 CLASP1Q7Z460 1538 aa33.75■■■□□ 2.99
ABR-231ENST00000574875 ERICH3Q5RHP9 1530 aa33.69■■■□□ 2.98
ABR-231ENST00000574875 FHAD1B1AJZ9 1412 aa33.67■■■□□ 2.98
ABR-231ENST00000574875 ADAMTS12P58397 1594 aa33.66■■■□□ 2.98
ABR-231ENST00000574875 GRIN2AQ12879 1464 aa33.66■■■□□ 2.98
ABR-231ENST00000574875 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
ABR-231ENST00000574875 NUP160Q12769 1436 aa33.53■■■□□ 2.96
ABR-231ENST00000574875 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
ABR-231ENST00000574875 CEP170Q5SW79 1584 aa33.49■■■□□ 2.95
ABR-231ENST00000574875 IGF1RP08069 1367 aa33.47■■■□□ 2.95
ABR-231ENST00000574875 JPH4Q96JJ6 628 aa33.31■■■□□ 2.92
ABR-231ENST00000574875 ERCC6L2Q5T890 1561 aa33.29■■■□□ 2.92
ABR-231ENST00000574875 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
ABR-231ENST00000574875 CUL7Q14999 1698 aa33.28■■■□□ 2.92
ABR-231ENST00000574875 CARMIL1Q5VZK9 1371 aa33.25■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms