RNA–Protein interactions for RNA: ENST00000573538.5

LCAT-205, Transcript of lecithin-cholesterol acyltransferase, humanhuman

TSL 3

Gene LCAT, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCAT-205ENST00000573538 NISCHQ9Y2I1 1504 aa38.83■■■■□ 3.81
LCAT-205ENST00000573538 CCDC180Q9P1Z9 1646 aa34.61■■■■□ 3.13
LCAT-205ENST00000573538 ABCC9O60706 1549 aa34.14■■■■□ 3.06
LCAT-205ENST00000573538 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
LCAT-205ENST00000573538 NACADO15069 1562 aa32.66■■■□□ 2.82
LCAT-205ENST00000573538 DCAF8L2P0C7V8 631 aa32.55■■■□□ 2.8
LCAT-205ENST00000573538 MYO15BQ96JP2 1530 aa32.43■■■□□ 2.78
LCAT-205ENST00000573538 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
LCAT-205ENST00000573538 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
LCAT-205ENST00000573538 PABPN1Q86U42 306 aaKnown RBP eCLIP31.87■■■□□ 2.695e-7■■■■□ 19.4
LCAT-205ENST00000573538 UNC13AQ9UPW8 1703 aa31.82■■■□□ 2.68
LCAT-205ENST00000573538 BICRAQ9NZM4 1560 aa31.71■■■□□ 2.67
LCAT-205ENST00000573538 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
LCAT-205ENST00000573538 SCRIBQ14160 1630 aa31.51■■■□□ 2.63
LCAT-205ENST00000573538 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
LCAT-205ENST00000573538 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
LCAT-205ENST00000573538 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
LCAT-205ENST00000573538 CECR2Q9BXF3 1484 aa30.75■■■□□ 2.51
LCAT-205ENST00000573538 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
LCAT-205ENST00000573538 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
LCAT-205ENST00000573538 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
LCAT-205ENST00000573538 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
LCAT-205ENST00000573538 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
LCAT-205ENST00000573538 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
LCAT-205ENST00000573538 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
LCAT-205ENST00000573538 MROH2BQ7Z745 1585 aa29.88■■■□□ 2.37
LCAT-205ENST00000573538 BAZ1BQ9UIG0 1483 aaKnown RBP29.85■■■□□ 2.37
LCAT-205ENST00000573538 ERCC6Q03468 1493 aa29.49■■■□□ 2.31
LCAT-205ENST00000573538 WIZO95785 1651 aa29.49■■■□□ 2.31
LCAT-205ENST00000573538 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
LCAT-205ENST00000573538 NESP48681 1621 aa29.43■■■□□ 2.3
LCAT-205ENST00000573538 LAMC3Q9Y6N6 1575 aa29.38■■■□□ 2.29
LCAT-205ENST00000573538 CUX2O14529 1486 aa29.31■■■□□ 2.28
LCAT-205ENST00000573538 CADPSQ9ULU8 1353 aa29.27■■■□□ 2.28
LCAT-205ENST00000573538 PDS5BQ9NTI5 1447 aa29.25■■■□□ 2.27
LCAT-205ENST00000573538 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
LCAT-205ENST00000573538 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
LCAT-205ENST00000573538 CFTRP13569 1480 aa29.03■■■□□ 2.24
LCAT-205ENST00000573538 KIF21AQ7Z4S6 1674 aa29.02■■■□□ 2.24
LCAT-205ENST00000573538 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
LCAT-205ENST00000573538 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
LCAT-205ENST00000573538 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
LCAT-205ENST00000573538 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
LCAT-205ENST00000573538 WDR62O43379 1518 aa28.82■■■□□ 2.2
LCAT-205ENST00000573538 DNAJC5Q9H3Z4 198 aa28.75■■■□□ 2.19
LCAT-205ENST00000573538 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
LCAT-205ENST00000573538 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
LCAT-205ENST00000573538 SUPT5HO00267 1087 aaKnown RBP28.5■■■□□ 2.15
LCAT-205ENST00000573538 ABCC8Q09428 1581 aa28.45■■■□□ 2.15
LCAT-205ENST00000573538 TOPBP1Q92547 1522 aa28.39■■■□□ 2.14
LCAT-205ENST00000573538 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
LCAT-205ENST00000573538 DNMBPQ6XZF7 1577 aa28.33■■■□□ 2.13
LCAT-205ENST00000573538 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
LCAT-205ENST00000573538 POLA1P09884 1462 aaPredicted RBP28.14■■■□□ 2.09
LCAT-205ENST00000573538 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
LCAT-205ENST00000573538 OSCARQ8IYS5 282 aa28.07■■■□□ 2.08
LCAT-205ENST00000573538 SOGA1O94964 1423 aa28.05■■■□□ 2.08
LCAT-205ENST00000573538 CUX1P39880 1505 aa28.05■■■□□ 2.08
LCAT-205ENST00000573538 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
LCAT-205ENST00000573538 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
LCAT-205ENST00000573538 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
LCAT-205ENST00000573538 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.072e-9■■■■■ 47.9
LCAT-205ENST00000573538 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
LCAT-205ENST00000573538 TDRD9Q8NDG6 1382 aaKnown RBP27.9■■■□□ 2.06
LCAT-205ENST00000573538 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.05
LCAT-205ENST00000573538 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
LCAT-205ENST00000573538 GRIN2BQ13224 1484 aa27.76■■■□□ 2.04
LCAT-205ENST00000573538 TOP2BQ02880 1626 aa27.74■■■□□ 2.03
LCAT-205ENST00000573538 FBLN2P98095 1184 aa27.73■■■□□ 2.03
LCAT-205ENST00000573538 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
LCAT-205ENST00000573538 MAGI1Q96QZ7 1491 aaPredicted RBP27.72■■■□□ 2.03
LCAT-205ENST00000573538 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
LCAT-205ENST00000573538 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.03
LCAT-205ENST00000573538 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
LCAT-205ENST00000573538 CHD1O14646 1710 aa27.65■■■□□ 2.02
LCAT-205ENST00000573538 CHMP7Q8WUX9 453 aaPredicted RBP27.65■■■□□ 2.02
LCAT-205ENST00000573538 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
LCAT-205ENST00000573538 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
LCAT-205ENST00000573538 SYNJ2O15056 1496 aa27.61■■■□□ 2.01
LCAT-205ENST00000573538 ARHGEF11O15085 1522 aa27.55■■■□□ 2
LCAT-205ENST00000573538 PBRM1Q86U86 1689 aa27.55■■■□□ 2
LCAT-205ENST00000573538 RIMBP3CA6NJZ7 1639 aa27.53■■■□□ 2
LCAT-205ENST00000573538 RIMBP3BA6NNM3 1639 aa27.53■■■□□ 2
LCAT-205ENST00000573538 RIMBP3Q9UFD9 1639 aa27.53■■■□□ 2
LCAT-205ENST00000573538 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
LCAT-205ENST00000573538 ERICH3Q5RHP9 1530 aa27.43■■□□□ 1.98
LCAT-205ENST00000573538 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
LCAT-205ENST00000573538 ADAMTS12P58397 1594 aa27.39■■□□□ 1.97
LCAT-205ENST00000573538 GRIN2AQ12879 1464 aa27.38■■□□□ 1.97
LCAT-205ENST00000573538 CYB5RLQ6IPT4 315 aa27.33■■□□□ 1.97
LCAT-205ENST00000573538 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
LCAT-205ENST00000573538 NUP160Q12769 1436 aa27.29■■□□□ 1.96
LCAT-205ENST00000573538 KIF27Q86VH2 1401 aa27.29■■□□□ 1.96
LCAT-205ENST00000573538 CEP170Q5SW79 1584 aa27.2■■□□□ 1.94
LCAT-205ENST00000573538 IGF1RP08069 1367 aa27.2■■□□□ 1.94
LCAT-205ENST00000573538 CUL7Q14999 1698 aa27.09■■□□□ 1.93
LCAT-205ENST00000573538 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
LCAT-205ENST00000573538 CARMIL1Q5VZK9 1371 aa27.03■■□□□ 1.92
LCAT-205ENST00000573538 JPH4Q96JJ6 628 aa27.02■■□□□ 1.92
LCAT-205ENST00000573538 ERCC6L2Q5T890 1561 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms