RNA–Protein interactions for RNA: ENST00000572795.1

PITPNM3-203, Transcript of PITPNM family member 3, humanhuman

TSL 1 (best)

Gene PITPNM3, Length 5,369 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM3-203ENST00000572795 DCAF8L2P0C7V8 631 aa22.54■■□□□ 1.2
PITPNM3-203ENST00000572795 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
PITPNM3-203ENST00000572795 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
PITPNM3-203ENST00000572795 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
PITPNM3-203ENST00000572795 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
PITPNM3-203ENST00000572795 MYT1Q01538 1121 aa20.38■□□□□ 0.85
PITPNM3-203ENST00000572795 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
PITPNM3-203ENST00000572795 CENPBP07199 599 aaPredicted RBP20.14■□□□□ 0.81
PITPNM3-203ENST00000572795 ZEB1P37275 1124 aaPredicted RBP20.07■□□□□ 0.8
PITPNM3-203ENST00000572795 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
PITPNM3-203ENST00000572795 APLP2Q06481 763 aa20.01■□□□□ 0.79
PITPNM3-203ENST00000572795 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
PITPNM3-203ENST00000572795 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
PITPNM3-203ENST00000572795 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
PITPNM3-203ENST00000572795 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
PITPNM3-203ENST00000572795 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
PITPNM3-203ENST00000572795 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
PITPNM3-203ENST00000572795 NEFLP07196 543 aa19.48■□□□□ 0.71
PITPNM3-203ENST00000572795 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
PITPNM3-203ENST00000572795 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
PITPNM3-203ENST00000572795 HRCP23327 699 aa19.4■□□□□ 0.7
PITPNM3-203ENST00000572795 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
PITPNM3-203ENST00000572795 ABCC9O60706 1549 aa19.27■□□□□ 0.67
PITPNM3-203ENST00000572795 TRIM26Q12899 539 aaPredicted RBP19.24■□□□□ 0.67
PITPNM3-203ENST00000572795 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
PITPNM3-203ENST00000572795 DAXXQ9UER7 740 aaPredicted RBP18.89■□□□□ 0.61
PITPNM3-203ENST00000572795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
PITPNM3-203ENST00000572795 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
PITPNM3-203ENST00000572795 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
PITPNM3-203ENST00000572795 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
PITPNM3-203ENST00000572795 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
PITPNM3-203ENST00000572795 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
PITPNM3-203ENST00000572795 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
PITPNM3-203ENST00000572795 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
PITPNM3-203ENST00000572795 ITGAEP38570 1179 aa18.66■□□□□ 0.58
PITPNM3-203ENST00000572795 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
PITPNM3-203ENST00000572795 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
PITPNM3-203ENST00000572795 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
PITPNM3-203ENST00000572795 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
PITPNM3-203ENST00000572795 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
PITPNM3-203ENST00000572795 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
PITPNM3-203ENST00000572795 FBLN2P98095 1184 aa18.36■□□□□ 0.53
PITPNM3-203ENST00000572795 POLR3GLQ9BT43 218 aa18.33■□□□□ 0.53
PITPNM3-203ENST00000572795 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
PITPNM3-203ENST00000572795 FAM50AQ14320 339 aaKnown RBP18.31■□□□□ 0.52
PITPNM3-203ENST00000572795 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
PITPNM3-203ENST00000572795 BCANQ96GW7 911 aa18.23■□□□□ 0.51
PITPNM3-203ENST00000572795 TRIM52Q96A61 297 aa18.18■□□□□ 0.5
PITPNM3-203ENST00000572795 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
PITPNM3-203ENST00000572795 ANP32CO43423 234 aa18.14■□□□□ 0.49
PITPNM3-203ENST00000572795 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
PITPNM3-203ENST00000572795 CNGB1Q14028 1251 aaPredicted RBP18.09■□□□□ 0.49
PITPNM3-203ENST00000572795 P3H3Q8IVL6 736 aa18.08■□□□□ 0.48
PITPNM3-203ENST00000572795 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
PITPNM3-203ENST00000572795 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
PITPNM3-203ENST00000572795 ARID3CA6NKF2 412 aa17.99■□□□□ 0.47
PITPNM3-203ENST00000572795 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
PITPNM3-203ENST00000572795 NACADO15069 1562 aa17.93■□□□□ 0.46
PITPNM3-203ENST00000572795 GLIPR1L2Q4G1C9 344 aa17.91■□□□□ 0.46
PITPNM3-203ENST00000572795 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
PITPNM3-203ENST00000572795 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
PITPNM3-203ENST00000572795 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
PITPNM3-203ENST00000572795 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
PITPNM3-203ENST00000572795 FKBP8Q14318 412 aa17.81■□□□□ 0.44
PITPNM3-203ENST00000572795 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
PITPNM3-203ENST00000572795 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
PITPNM3-203ENST00000572795 ZBTB47Q9UFB7 747 aaPredicted RBP17.77■□□□□ 0.44
PITPNM3-203ENST00000572795 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
PITPNM3-203ENST00000572795 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
PITPNM3-203ENST00000572795 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
PITPNM3-203ENST00000572795 NPM2Q86SE8 214 aaKnown RBP17.71■□□□□ 0.43
PITPNM3-203ENST00000572795 CANXP27824 592 aaKnown RBP17.7■□□□□ 0.42
PITPNM3-203ENST00000572795 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
PITPNM3-203ENST00000572795 ESF1Q9H501 851 aaKnown RBP17.69■□□□□ 0.42
PITPNM3-203ENST00000572795 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
PITPNM3-203ENST00000572795 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
PITPNM3-203ENST00000572795 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
PITPNM3-203ENST00000572795 NBR1Q14596 966 aa17.55■□□□□ 0.4
PITPNM3-203ENST00000572795 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
PITPNM3-203ENST00000572795 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
PITPNM3-203ENST00000572795 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
PITPNM3-203ENST00000572795 WRNQ14191 1432 aaPredicted RBP eCLIP17.53■□□□□ 0.4
PITPNM3-203ENST00000572795 EEA1Q15075 1411 aa17.53■□□□□ 0.4
PITPNM3-203ENST00000572795 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
PITPNM3-203ENST00000572795 CLIP1P30622 1438 aa17.51■□□□□ 0.39
PITPNM3-203ENST00000572795 TSPY4P0CV99 314 aa17.51■□□□□ 0.39
PITPNM3-203ENST00000572795 TSPY10P0CW01 314 aa17.51■□□□□ 0.39
PITPNM3-203ENST00000572795 CHIC2Q9UKJ5 165 aa17.49■□□□□ 0.39
PITPNM3-203ENST00000572795 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
PITPNM3-203ENST00000572795 TONSLQ96HA7 1378 aa17.49■□□□□ 0.39
PITPNM3-203ENST00000572795 NEFMP07197 916 aa17.48■□□□□ 0.39
PITPNM3-203ENST00000572795 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
PITPNM3-203ENST00000572795 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
PITPNM3-203ENST00000572795 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
PITPNM3-203ENST00000572795 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
PITPNM3-203ENST00000572795 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.44■□□□□ 0.38
PITPNM3-203ENST00000572795 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
PITPNM3-203ENST00000572795 MIER1Q8N108 512 aa17.43■□□□□ 0.38
PITPNM3-203ENST00000572795 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
PITPNM3-203ENST00000572795 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 241.6 ms