RNA–Protein interactions for RNA: ENST00000572793.2

SRGAP2-202, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 5

Gene SRGAP2, Length 498 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-202ENST00000572793 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
SRGAP2-202ENST00000572793 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
SRGAP2-202ENST00000572793 ABCC9O60706 1549 aa16.55■□□□□ 0.24
SRGAP2-202ENST00000572793 DCAF8L2P0C7V8 631 aa15.8■□□□□ 0.12
SRGAP2-202ENST00000572793 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
SRGAP2-202ENST00000572793 NACADO15069 1562 aa15.7■□□□□ 0.1
SRGAP2-202ENST00000572793 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
SRGAP2-202ENST00000572793 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
SRGAP2-202ENST00000572793 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
SRGAP2-202ENST00000572793 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
SRGAP2-202ENST00000572793 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
SRGAP2-202ENST00000572793 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
SRGAP2-202ENST00000572793 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
SRGAP2-202ENST00000572793 SCRIBQ14160 1630 aa15.18■□□□□ 0.02
SRGAP2-202ENST00000572793 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
SRGAP2-202ENST00000572793 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
SRGAP2-202ENST00000572793 CC2D2AQ9P2K1 1620 aa14.89□□□□□ -0.03
SRGAP2-202ENST00000572793 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
SRGAP2-202ENST00000572793 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
SRGAP2-202ENST00000572793 ATAD2BQ9ULI0 1458 aa14.52□□□□□ -0.08
SRGAP2-202ENST00000572793 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
SRGAP2-202ENST00000572793 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.09
SRGAP2-202ENST00000572793 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
SRGAP2-202ENST00000572793 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
SRGAP2-202ENST00000572793 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
SRGAP2-202ENST00000572793 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
SRGAP2-202ENST00000572793 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
SRGAP2-202ENST00000572793 NESP48681 1621 aa14.26□□□□□ -0.13
SRGAP2-202ENST00000572793 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
SRGAP2-202ENST00000572793 WIZO95785 1651 aa14.2□□□□□ -0.14
SRGAP2-202ENST00000572793 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
SRGAP2-202ENST00000572793 CUX2O14529 1486 aa14.14□□□□□ -0.15
SRGAP2-202ENST00000572793 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
SRGAP2-202ENST00000572793 LAMC3Q9Y6N6 1575 aa14.12□□□□□ -0.15
SRGAP2-202ENST00000572793 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
SRGAP2-202ENST00000572793 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
SRGAP2-202ENST00000572793 DNAJC5Q9H3Z4 198 aa14.03□□□□□ -0.16
SRGAP2-202ENST00000572793 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
SRGAP2-202ENST00000572793 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
SRGAP2-202ENST00000572793 CFTRP13569 1480 aa13.97□□□□□ -0.17
SRGAP2-202ENST00000572793 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
SRGAP2-202ENST00000572793 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
SRGAP2-202ENST00000572793 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
SRGAP2-202ENST00000572793 CEP164Q9UPV0 1460 aa13.91□□□□□ -0.18
SRGAP2-202ENST00000572793 WDR62O43379 1518 aa13.87□□□□□ -0.19
SRGAP2-202ENST00000572793 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
SRGAP2-202ENST00000572793 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
SRGAP2-202ENST00000572793 PRDM2Q13029 1718 aa13.69□□□□□ -0.22
SRGAP2-202ENST00000572793 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
SRGAP2-202ENST00000572793 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
SRGAP2-202ENST00000572793 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
SRGAP2-202ENST00000572793 ZNF608Q9ULD9 1512 aaPredicted RBP13.63□□□□□ -0.23
SRGAP2-202ENST00000572793 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
SRGAP2-202ENST00000572793 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
SRGAP2-202ENST00000572793 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
SRGAP2-202ENST00000572793 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
SRGAP2-202ENST00000572793 SOGA1O94964 1423 aa13.54□□□□□ -0.24
SRGAP2-202ENST00000572793 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
SRGAP2-202ENST00000572793 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
SRGAP2-202ENST00000572793 CUX1P39880 1505 aa13.51□□□□□ -0.25
SRGAP2-202ENST00000572793 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
SRGAP2-202ENST00000572793 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
SRGAP2-202ENST00000572793 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
SRGAP2-202ENST00000572793 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
SRGAP2-202ENST00000572793 FBLN2P98095 1184 aa13.45□□□□□ -0.26
SRGAP2-202ENST00000572793 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
SRGAP2-202ENST00000572793 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
SRGAP2-202ENST00000572793 WRNQ14191 1432 aaPredicted RBP eCLIP13.37□□□□□ -0.27
SRGAP2-202ENST00000572793 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
SRGAP2-202ENST00000572793 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
SRGAP2-202ENST00000572793 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
SRGAP2-202ENST00000572793 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
SRGAP2-202ENST00000572793 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
SRGAP2-202ENST00000572793 CHD1O14646 1710 aa13.32□□□□□ -0.28
SRGAP2-202ENST00000572793 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
SRGAP2-202ENST00000572793 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
SRGAP2-202ENST00000572793 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
SRGAP2-202ENST00000572793 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
SRGAP2-202ENST00000572793 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
SRGAP2-202ENST00000572793 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
SRGAP2-202ENST00000572793 ABCA5Q8WWZ7 1642 aa13.27□□□□□ -0.29
SRGAP2-202ENST00000572793 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
SRGAP2-202ENST00000572793 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
SRGAP2-202ENST00000572793 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
SRGAP2-202ENST00000572793 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
SRGAP2-202ENST00000572793 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
SRGAP2-202ENST00000572793 ADAMTS12P58397 1594 aa13.16□□□□□ -0.3
SRGAP2-202ENST00000572793 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
SRGAP2-202ENST00000572793 NUP160Q12769 1436 aa13.14□□□□□ -0.31
SRGAP2-202ENST00000572793 IGF1RP08069 1367 aa13.13□□□□□ -0.31
SRGAP2-202ENST00000572793 CEP170Q5SW79 1584 aa13.11□□□□□ -0.31
SRGAP2-202ENST00000572793 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
SRGAP2-202ENST00000572793 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
SRGAP2-202ENST00000572793 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
SRGAP2-202ENST00000572793 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
SRGAP2-202ENST00000572793 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
SRGAP2-202ENST00000572793 PRG4Q92954 1404 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms