RNA–Protein interactions for RNA: ENST00000572681.6

CIC-204, Transcript of capicua transcriptional repressor, humanhuman

TSL 5 BASIC

Gene CIC, Length 8,218 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-204ENST00000572681 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
CIC-204ENST00000572681 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
CIC-204ENST00000572681 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
CIC-204ENST00000572681 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
CIC-204ENST00000572681 MYT1Q01538 1121 aa19.88■□□□□ 0.77
CIC-204ENST00000572681 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
CIC-204ENST00000572681 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
CIC-204ENST00000572681 APLP2Q06481 763 aa19.54■□□□□ 0.72
CIC-204ENST00000572681 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.71
CIC-204ENST00000572681 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
CIC-204ENST00000572681 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
CIC-204ENST00000572681 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
CIC-204ENST00000572681 NEFLP07196 543 aa19.21■□□□□ 0.67
CIC-204ENST00000572681 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
CIC-204ENST00000572681 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
CIC-204ENST00000572681 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
CIC-204ENST00000572681 PCGF6Q9BYE7 350 aa18.87■□□□□ 0.61
CIC-204ENST00000572681 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
CIC-204ENST00000572681 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.55
CIC-204ENST00000572681 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
CIC-204ENST00000572681 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
CIC-204ENST00000572681 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
CIC-204ENST00000572681 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
CIC-204ENST00000572681 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
CIC-204ENST00000572681 CLSPNQ9HAW4 1339 aa18.21■□□□□ 0.51
CIC-204ENST00000572681 MYT1LQ9UL68 1186 aa18.07■□□□□ 0.48
CIC-204ENST00000572681 POLR3GLQ9BT43 218 aa18.06■□□□□ 0.48
CIC-204ENST00000572681 TRIM26Q12899 539 aaPredicted RBP17.92■□□□□ 0.46
CIC-204ENST00000572681 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
CIC-204ENST00000572681 GLIPR1L2Q4G1C9 344 aa17.88■□□□□ 0.45
CIC-204ENST00000572681 HRCP23327 699 aa17.87■□□□□ 0.45
CIC-204ENST00000572681 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
CIC-204ENST00000572681 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
CIC-204ENST00000572681 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
CIC-204ENST00000572681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
CIC-204ENST00000572681 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
CIC-204ENST00000572681 ANP32BQ92688 251 aaKnown RBP17.74■□□□□ 0.43
CIC-204ENST00000572681 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
CIC-204ENST00000572681 ITGAEP38570 1179 aa17.68■□□□□ 0.42
CIC-204ENST00000572681 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
CIC-204ENST00000572681 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
CIC-204ENST00000572681 ANP32AP39687 249 aaKnown RBP17.6■□□□□ 0.41
CIC-204ENST00000572681 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.39
CIC-204ENST00000572681 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
CIC-204ENST00000572681 NEFMP07197 916 aa17.45■□□□□ 0.38
CIC-204ENST00000572681 ANP32CO43423 234 aa17.45■□□□□ 0.38
CIC-204ENST00000572681 BCANQ96GW7 911 aa17.42■□□□□ 0.38
CIC-204ENST00000572681 HSP90AA1P07900 732 aaKnown RBP17.39■□□□□ 0.37
CIC-204ENST00000572681 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
CIC-204ENST00000572681 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
CIC-204ENST00000572681 UPF2Q9HAU5 1272 aaKnown RBP17.33■□□□□ 0.37
CIC-204ENST00000572681 LOC105371045A0A1W2PR82 267 aa17.29■□□□□ 0.36
CIC-204ENST00000572681 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
CIC-204ENST00000572681 CDK11BP21127 795 aaKnown RBP17.29■□□□□ 0.36
CIC-204ENST00000572681 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
CIC-204ENST00000572681 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
CIC-204ENST00000572681 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
CIC-204ENST00000572681 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
CIC-204ENST00000572681 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
CIC-204ENST00000572681 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
CIC-204ENST00000572681 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
CIC-204ENST00000572681 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
CIC-204ENST00000572681 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
CIC-204ENST00000572681 TRIM44Q96DX7 344 aaPredicted RBP17■□□□□ 0.31
CIC-204ENST00000572681 FBLN2P98095 1184 aa16.98■□□□□ 0.31
CIC-204ENST00000572681 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
CIC-204ENST00000572681 NBR1Q14596 966 aa16.93■□□□□ 0.3
CIC-204ENST00000572681 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
CIC-204ENST00000572681 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
CIC-204ENST00000572681 ABCC9O60706 1549 aa16.9■□□□□ 0.3
CIC-204ENST00000572681 ARXQ96QS3 562 aa16.89■□□□□ 0.29
CIC-204ENST00000572681 FKBP8Q14318 412 aa16.88■□□□□ 0.29
CIC-204ENST00000572681 GOLGA6L22H0YM25 854 aa16.86■□□□□ 0.29
CIC-204ENST00000572681 BECN1Q14457 450 aa16.85■□□□□ 0.29
CIC-204ENST00000572681 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.29
CIC-204ENST00000572681 CCDC136Q96JN2 1154 aa16.83■□□□□ 0.28
CIC-204ENST00000572681 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
CIC-204ENST00000572681 ZRSR1Q15695 479 aaKnown RBP16.82■□□□□ 0.28
CIC-204ENST00000572681 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
CIC-204ENST00000572681 ERICH6BQ5W0A0 696 aa16.78■□□□□ 0.28
CIC-204ENST00000572681 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
CIC-204ENST00000572681 PTMAP06454 111 aaKnown RBP16.77■□□□□ 0.28
CIC-204ENST00000572681 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
CIC-204ENST00000572681 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
CIC-204ENST00000572681 HNRNPUQ00839 825 aaKnown RBP eCLIP16.73■□□□□ 0.27
CIC-204ENST00000572681 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
CIC-204ENST00000572681 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
CIC-204ENST00000572681 NRDCO43847 1150 aa16.65■□□□□ 0.26
CIC-204ENST00000572681 NAP1L5Q96NT1 182 aaPredicted RBP16.64■□□□□ 0.25
CIC-204ENST00000572681 WDR43Q15061 677 aaKnown RBP eCLIP16.64■□□□□ 0.25
CIC-204ENST00000572681 TMC1Q8TDI8 760 aa16.63■□□□□ 0.25
CIC-204ENST00000572681 SCRIBQ14160 1630 aa16.62■□□□□ 0.25
CIC-204ENST00000572681 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
CIC-204ENST00000572681 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
CIC-204ENST00000572681 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
CIC-204ENST00000572681 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
CIC-204ENST00000572681 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
CIC-204ENST00000572681 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
CIC-204ENST00000572681 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
CIC-204ENST00000572681 ZNF777Q9ULD5 760 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms