RNA–Protein interactions for RNA: ENST00000569965.5

PML-221, Transcript of promyelocytic leukemia, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PML, Length 2,148 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-221ENST00000569965 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
PML-221ENST00000569965 CCDC180Q9P1Z9 1646 aa34.54■■■■□ 3.12
PML-221ENST00000569965 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
PML-221ENST00000569965 DCAF1Q9Y4B6 1507 aa32.83■■■□□ 2.85
PML-221ENST00000569965 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
PML-221ENST00000569965 ABCC9O60706 1549 aa32.57■■■□□ 2.8
PML-221ENST00000569965 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
PML-221ENST00000569965 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
PML-221ENST00000569965 NACADO15069 1562 aa32.18■■■□□ 2.74
PML-221ENST00000569965 RB1CC1Q8TDY2 1594 aa31.87■■■□□ 2.69
PML-221ENST00000569965 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
PML-221ENST00000569965 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
PML-221ENST00000569965 SUPT5HO00267 1087 aaKnown RBP31.12■■■□□ 2.57
PML-221ENST00000569965 BICRAQ9NZM4 1560 aa30.91■■■□□ 2.54
PML-221ENST00000569965 CECR2Q9BXF3 1484 aa30.78■■■□□ 2.52
PML-221ENST00000569965 RSF1Q96T23 1441 aaPredicted RBP30.78■■■□□ 2.52
PML-221ENST00000569965 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
PML-221ENST00000569965 MROH2BQ7Z745 1585 aa30.61■■■□□ 2.49
PML-221ENST00000569965 BAZ1AQ9NRL2 1556 aaPredicted RBP30.61■■■□□ 2.49
PML-221ENST00000569965 SMARCA4P51532 1647 aa30.44■■■□□ 2.46
PML-221ENST00000569965 WIZO95785 1651 aa30.35■■■□□ 2.45
PML-221ENST00000569965 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
PML-221ENST00000569965 TOP2AP11388 1531 aaKnown RBP30.05■■■□□ 2.4
PML-221ENST00000569965 EIF4G1Q04637 1599 aaKnown RBP29.97■■■□□ 2.39
PML-221ENST00000569965 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
PML-221ENST00000569965 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
PML-221ENST00000569965 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
PML-221ENST00000569965 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
PML-221ENST00000569965 BAZ1BQ9UIG0 1483 aaKnown RBP29.76■■■□□ 2.35
PML-221ENST00000569965 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
PML-221ENST00000569965 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
PML-221ENST00000569965 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
PML-221ENST00000569965 TRIM41Q8WV44 630 aa29.3■■■□□ 2.28
PML-221ENST00000569965 ABCC8Q09428 1581 aa29.1■■■□□ 2.25
PML-221ENST00000569965 CFTRP13569 1480 aa29.06■■■□□ 2.24
PML-221ENST00000569965 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
PML-221ENST00000569965 CADPSQ9ULU8 1353 aa28.94■■■□□ 2.22
PML-221ENST00000569965 PRDM2Q13029 1718 aa28.87■■■□□ 2.21
PML-221ENST00000569965 SYNJ1O43426 1573 aa28.81■■■□□ 2.2
PML-221ENST00000569965 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
PML-221ENST00000569965 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
PML-221ENST00000569965 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.18
PML-221ENST00000569965 FAM9AQ8IZU1 332 aaPredicted RBP28.7■■■□□ 2.18
PML-221ENST00000569965 BIVM-ERCC5R4GMW8 1640 aa28.68■■■□□ 2.18
PML-221ENST00000569965 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
PML-221ENST00000569965 CUX1P39880 1505 aa28.62■■■□□ 2.17
PML-221ENST00000569965 NESP48681 1621 aa28.62■■■□□ 2.17
PML-221ENST00000569965 SOGA1O94964 1423 aa28.6■■■□□ 2.17
PML-221ENST00000569965 EEA1Q15075 1411 aa28.6■■■□□ 2.17
PML-221ENST00000569965 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
PML-221ENST00000569965 RUSC2Q8N2Y8 1516 aa28.48■■■□□ 2.15
PML-221ENST00000569965 PDS5BQ9NTI5 1447 aa28.45■■■□□ 2.15
PML-221ENST00000569965 CSRNP3Q8WYN3 585 aa28.43■■■□□ 2.14
PML-221ENST00000569965 CEP164Q9UPV0 1460 aa28.41■■■□□ 2.14
PML-221ENST00000569965 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
PML-221ENST00000569965 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
PML-221ENST00000569965 FGD5Q6ZNL6 1462 aa28.29■■■□□ 2.12
PML-221ENST00000569965 KIF21AQ7Z4S6 1674 aa28.27■■■□□ 2.12
PML-221ENST00000569965 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
PML-221ENST00000569965 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
PML-221ENST00000569965 KIF27Q86VH2 1401 aa28.23■■■□□ 2.11
PML-221ENST00000569965 KIF21BO75037 1637 aa28.19■■■□□ 2.1
PML-221ENST00000569965 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
PML-221ENST00000569965 GOLGA3Q08378 1498 aa28.17■■■□□ 2.1
PML-221ENST00000569965 TNIKQ9UKE5 1360 aa28.12■■■□□ 2.09
PML-221ENST00000569965 CUX2O14529 1486 aa28.12■■■□□ 2.09
PML-221ENST00000569965 ABCA10Q8WWZ4 1543 aa28.08■■■□□ 2.09
PML-221ENST00000569965 PRXQ9BXM0 1461 aa28.07■■■□□ 2.08
PML-221ENST00000569965 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
PML-221ENST00000569965 RAD54L2Q9Y4B4 1467 aa28.05■■■□□ 2.08
PML-221ENST00000569965 UBTFP17480 764 aaKnown RBP28.03■■■□□ 2.08
PML-221ENST00000569965 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
PML-221ENST00000569965 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
PML-221ENST00000569965 IGF1RP08069 1367 aa27.99■■■□□ 2.07
PML-221ENST00000569965 WDR97A6NE52 1622 aa27.95■■■□□ 2.06
PML-221ENST00000569965 CEP162Q5TB80 1403 aa27.94■■■□□ 2.06
PML-221ENST00000569965 ERCC6Q03468 1493 aa27.92■■■□□ 2.06
PML-221ENST00000569965 WDR62O43379 1518 aa27.92■■■□□ 2.06
PML-221ENST00000569965 TARBP1Q13395 1621 aaKnown RBP27.88■■■□□ 2.05
PML-221ENST00000569965 CARMIL1Q5VZK9 1371 aa27.83■■■□□ 2.05
PML-221ENST00000569965 ABCA5Q8WWZ7 1642 aa27.82■■■□□ 2.04
PML-221ENST00000569965 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
PML-221ENST00000569965 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
PML-221ENST00000569965 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
PML-221ENST00000569965 CUL7Q14999 1698 aa27.75■■■□□ 2.03
PML-221ENST00000569965 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
PML-221ENST00000569965 CLIP1P30622 1438 aa27.72■■■□□ 2.03
PML-221ENST00000569965 AQRO60306 1485 aaKnown RBP eCLIP27.6■■■□□ 2.011e-6■■■■■ 29.8
PML-221ENST00000569965 PBRM1Q86U86 1689 aa27.57■■■□□ 2
PML-221ENST00000569965 ZNF608Q9ULD9 1512 aaPredicted RBP27.56■■■□□ 2
PML-221ENST00000569965 GRIN2BQ13224 1484 aa27.55■■■□□ 2
PML-221ENST00000569965 PCGF6Q9BYE7 350 aa27.52■■■□□ 2
PML-221ENST00000569965 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
PML-221ENST00000569965 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
PML-221ENST00000569965 FHAD1B1AJZ9 1412 aa27.48■■□□□ 1.99
PML-221ENST00000569965 EIF4G3O43432 1585 aaKnown RBP27.46■■□□□ 1.99
PML-221ENST00000569965 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
PML-221ENST00000569965 HRCP23327 699 aa27.44■■□□□ 1.98
PML-221ENST00000569965 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
PML-221ENST00000569965 ARHGAP35Q9NRY4 1499 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms