RNA–Protein interactions for RNA: ENST00000568656.5

NUP93-217, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-217ENST00000568656 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
NUP93-217ENST00000568656 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
NUP93-217ENST00000568656 ABCC9O60706 1549 aa19.95■□□□□ 0.78
NUP93-217ENST00000568656 DCAF8L2P0C7V8 631 aa19.21■□□□□ 0.67
NUP93-217ENST00000568656 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
NUP93-217ENST00000568656 NACADO15069 1562 aa18.93■□□□□ 0.62
NUP93-217ENST00000568656 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
NUP93-217ENST00000568656 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
NUP93-217ENST00000568656 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
NUP93-217ENST00000568656 DCAF1Q9Y4B6 1507 aa18.67■□□□□ 0.58
NUP93-217ENST00000568656 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
NUP93-217ENST00000568656 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
NUP93-217ENST00000568656 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
NUP93-217ENST00000568656 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
NUP93-217ENST00000568656 SHROOM4Q9ULL8 1493 aa18.09■□□□□ 0.49
NUP93-217ENST00000568656 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
NUP93-217ENST00000568656 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
NUP93-217ENST00000568656 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
NUP93-217ENST00000568656 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
NUP93-217ENST00000568656 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
NUP93-217ENST00000568656 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
NUP93-217ENST00000568656 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
NUP93-217ENST00000568656 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
NUP93-217ENST00000568656 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
NUP93-217ENST00000568656 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
NUP93-217ENST00000568656 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
NUP93-217ENST00000568656 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
NUP93-217ENST00000568656 WIZO95785 1651 aa17.35■□□□□ 0.37
NUP93-217ENST00000568656 RSF1Q96T23 1441 aaPredicted RBP17.34■□□□□ 0.37
NUP93-217ENST00000568656 NESP48681 1621 aa17.26■□□□□ 0.35
NUP93-217ENST00000568656 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
NUP93-217ENST00000568656 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
NUP93-217ENST00000568656 CADPSQ9ULU8 1353 aa17.06■□□□□ 0.32
NUP93-217ENST00000568656 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.32
NUP93-217ENST00000568656 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
NUP93-217ENST00000568656 SUPT5HO00267 1087 aaKnown RBP16.98■□□□□ 0.31
NUP93-217ENST00000568656 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
NUP93-217ENST00000568656 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
NUP93-217ENST00000568656 CFTRP13569 1480 aa16.93■□□□□ 0.3
NUP93-217ENST00000568656 CUX2O14529 1486 aa16.89■□□□□ 0.29
NUP93-217ENST00000568656 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
NUP93-217ENST00000568656 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
NUP93-217ENST00000568656 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
NUP93-217ENST00000568656 MRC2Q9UBG0 1479 aa16.8■□□□□ 0.28
NUP93-217ENST00000568656 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
NUP93-217ENST00000568656 WDR62O43379 1518 aa16.72■□□□□ 0.27
NUP93-217ENST00000568656 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
NUP93-217ENST00000568656 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
NUP93-217ENST00000568656 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
NUP93-217ENST00000568656 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
NUP93-217ENST00000568656 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
NUP93-217ENST00000568656 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
NUP93-217ENST00000568656 CUX1P39880 1505 aa16.46■□□□□ 0.23
NUP93-217ENST00000568656 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
NUP93-217ENST00000568656 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
NUP93-217ENST00000568656 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
NUP93-217ENST00000568656 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP93-217ENST00000568656 SOGA1O94964 1423 aa16.4■□□□□ 0.22
NUP93-217ENST00000568656 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
NUP93-217ENST00000568656 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
NUP93-217ENST00000568656 TARBP1Q13395 1621 aaKnown RBP16.38■□□□□ 0.21
NUP93-217ENST00000568656 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
NUP93-217ENST00000568656 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
NUP93-217ENST00000568656 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
NUP93-217ENST00000568656 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
NUP93-217ENST00000568656 FBLN2P98095 1184 aa16.27■□□□□ 0.2
NUP93-217ENST00000568656 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
NUP93-217ENST00000568656 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
NUP93-217ENST00000568656 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
NUP93-217ENST00000568656 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
NUP93-217ENST00000568656 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
NUP93-217ENST00000568656 WDR97A6NE52 1622 aa16.17■□□□□ 0.18
NUP93-217ENST00000568656 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
NUP93-217ENST00000568656 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
NUP93-217ENST00000568656 CHD1O14646 1710 aa16.12■□□□□ 0.17
NUP93-217ENST00000568656 TRIM41Q8WV44 630 aa16.12■□□□□ 0.17
NUP93-217ENST00000568656 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
NUP93-217ENST00000568656 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
NUP93-217ENST00000568656 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
NUP93-217ENST00000568656 SYNJ2O15056 1496 aa16.05■□□□□ 0.16
NUP93-217ENST00000568656 RIMBP3CA6NJZ7 1639 aa16■□□□□ 0.15
NUP93-217ENST00000568656 RIMBP3BA6NNM3 1639 aa16■□□□□ 0.15
NUP93-217ENST00000568656 RIMBP3Q9UFD9 1639 aa16■□□□□ 0.15
NUP93-217ENST00000568656 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
NUP93-217ENST00000568656 IGF1RP08069 1367 aa15.98■□□□□ 0.15
NUP93-217ENST00000568656 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
NUP93-217ENST00000568656 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
NUP93-217ENST00000568656 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
NUP93-217ENST00000568656 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
NUP93-217ENST00000568656 GRIN2AQ12879 1464 aa15.96■□□□□ 0.14
NUP93-217ENST00000568656 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
NUP93-217ENST00000568656 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
NUP93-217ENST00000568656 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
NUP93-217ENST00000568656 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
NUP93-217ENST00000568656 NUP160Q12769 1436 aa15.89■□□□□ 0.13
NUP93-217ENST00000568656 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
NUP93-217ENST00000568656 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
NUP93-217ENST00000568656 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
NUP93-217ENST00000568656 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
NUP93-217ENST00000568656 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms