RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
LPCAT4-206ENST00000566581 CCDC180Q9P1Z9 1646 aa27.8■■■□□ 2.04
LPCAT4-206ENST00000566581 ABCC9O60706 1549 aa27.31■■□□□ 1.96
LPCAT4-206ENST00000566581 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
LPCAT4-206ENST00000566581 NACADO15069 1562 aa26.18■■□□□ 1.78
LPCAT4-206ENST00000566581 DCAF8L2P0C7V8 631 aa26.02■■□□□ 1.76
LPCAT4-206ENST00000566581 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
LPCAT4-206ENST00000566581 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
LPCAT4-206ENST00000566581 DCAF1Q9Y4B6 1507 aa25.78■■□□□ 1.72
LPCAT4-206ENST00000566581 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
LPCAT4-206ENST00000566581 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
LPCAT4-206ENST00000566581 BICRAQ9NZM4 1560 aa25.46■■□□□ 1.67
LPCAT4-206ENST00000566581 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
LPCAT4-206ENST00000566581 SCRIBQ14160 1630 aa25.26■■□□□ 1.63
LPCAT4-206ENST00000566581 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
LPCAT4-206ENST00000566581 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
LPCAT4-206ENST00000566581 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
LPCAT4-206ENST00000566581 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
LPCAT4-206ENST00000566581 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
LPCAT4-206ENST00000566581 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
LPCAT4-206ENST00000566581 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
LPCAT4-206ENST00000566581 ATAD2BQ9ULI0 1458 aa24.1■■□□□ 1.45
LPCAT4-206ENST00000566581 SMARCA2P51531 1590 aa24.09■■□□□ 1.45
LPCAT4-206ENST00000566581 HMGXB3Q12766 1538 aa24■■□□□ 1.43
LPCAT4-206ENST00000566581 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
LPCAT4-206ENST00000566581 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.43
LPCAT4-206ENST00000566581 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
LPCAT4-206ENST00000566581 WIZO95785 1651 aa23.7■■□□□ 1.38
LPCAT4-206ENST00000566581 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
LPCAT4-206ENST00000566581 NESP48681 1621 aa23.59■■□□□ 1.37
LPCAT4-206ENST00000566581 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
LPCAT4-206ENST00000566581 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
LPCAT4-206ENST00000566581 CUX2O14529 1486 aa23.44■■□□□ 1.34
LPCAT4-206ENST00000566581 TOP2AP11388 1531 aaKnown RBP23.43■■□□□ 1.34
LPCAT4-206ENST00000566581 CADPSQ9ULU8 1353 aa23.42■■□□□ 1.34
LPCAT4-206ENST00000566581 PDS5BQ9NTI5 1447 aa23.38■■□□□ 1.33
LPCAT4-206ENST00000566581 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
LPCAT4-206ENST00000566581 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
LPCAT4-206ENST00000566581 CFTRP13569 1480 aa23.24■■□□□ 1.31
LPCAT4-206ENST00000566581 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
LPCAT4-206ENST00000566581 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
LPCAT4-206ENST00000566581 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
LPCAT4-206ENST00000566581 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
LPCAT4-206ENST00000566581 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
LPCAT4-206ENST00000566581 WDR62O43379 1518 aa23.08■■□□□ 1.28
LPCAT4-206ENST00000566581 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
LPCAT4-206ENST00000566581 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
LPCAT4-206ENST00000566581 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
LPCAT4-206ENST00000566581 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
LPCAT4-206ENST00000566581 TOPBP1Q92547 1522 aa22.74■■□□□ 1.23
LPCAT4-206ENST00000566581 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
LPCAT4-206ENST00000566581 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
LPCAT4-206ENST00000566581 ZNF608Q9ULD9 1512 aaPredicted RBP22.55■■□□□ 1.2
LPCAT4-206ENST00000566581 TARBP1Q13395 1621 aaKnown RBP22.54■■□□□ 1.2
LPCAT4-206ENST00000566581 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
LPCAT4-206ENST00000566581 CUX1P39880 1505 aa22.49■■□□□ 1.19
LPCAT4-206ENST00000566581 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
LPCAT4-206ENST00000566581 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
LPCAT4-206ENST00000566581 SOGA1O94964 1423 aa22.44■■□□□ 1.18
LPCAT4-206ENST00000566581 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
LPCAT4-206ENST00000566581 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
LPCAT4-206ENST00000566581 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.189e-7■□□□□ 8.2
LPCAT4-206ENST00000566581 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
LPCAT4-206ENST00000566581 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
LPCAT4-206ENST00000566581 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
LPCAT4-206ENST00000566581 TOP2BQ02880 1626 aa22.27■■□□□ 1.16
LPCAT4-206ENST00000566581 CHD1O14646 1710 aa22.26■■□□□ 1.15
LPCAT4-206ENST00000566581 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
LPCAT4-206ENST00000566581 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
LPCAT4-206ENST00000566581 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
LPCAT4-206ENST00000566581 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
LPCAT4-206ENST00000566581 MAGI1Q96QZ7 1491 aaPredicted RBP22.19■■□□□ 1.14
LPCAT4-206ENST00000566581 GAPVD1Q14C86 1478 aa22.18■■□□□ 1.14
LPCAT4-206ENST00000566581 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
LPCAT4-206ENST00000566581 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
LPCAT4-206ENST00000566581 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
LPCAT4-206ENST00000566581 FBLN2P98095 1184 aa22.15■■□□□ 1.14
LPCAT4-206ENST00000566581 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
LPCAT4-206ENST00000566581 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
LPCAT4-206ENST00000566581 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
LPCAT4-206ENST00000566581 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
LPCAT4-206ENST00000566581 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
LPCAT4-206ENST00000566581 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
LPCAT4-206ENST00000566581 ARHGEF11O15085 1522 aa22.05■■□□□ 1.12
LPCAT4-206ENST00000566581 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
LPCAT4-206ENST00000566581 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
LPCAT4-206ENST00000566581 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
LPCAT4-206ENST00000566581 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
LPCAT4-206ENST00000566581 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
LPCAT4-206ENST00000566581 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
LPCAT4-206ENST00000566581 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
LPCAT4-206ENST00000566581 NUP160Q12769 1436 aa21.84■■□□□ 1.09
LPCAT4-206ENST00000566581 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
LPCAT4-206ENST00000566581 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
LPCAT4-206ENST00000566581 IGF1RP08069 1367 aa21.77■■□□□ 1.08
LPCAT4-206ENST00000566581 CUL7Q14999 1698 aa21.74■■□□□ 1.07
LPCAT4-206ENST00000566581 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
LPCAT4-206ENST00000566581 ERCC6L2Q5T890 1561 aa21.64■■□□□ 1.05
LPCAT4-206ENST00000566581 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
LPCAT4-206ENST00000566581 JPH4Q96JJ6 628 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms