RNA–Protein interactions for RNA: ENST00000566574.5

DDX19A-209, Transcript of DEAD-box helicase 19A, humanhuman

TSL 1 (best)

Gene DDX19A, Length 5,007 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX19A-209ENST00000566574 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
DDX19A-209ENST00000566574 CCDC180Q9P1Z9 1646 aa20.06■□□□□ 0.8
DDX19A-209ENST00000566574 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
DDX19A-209ENST00000566574 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
DDX19A-209ENST00000566574 NACADO15069 1562 aa18.96■□□□□ 0.63
DDX19A-209ENST00000566574 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
DDX19A-209ENST00000566574 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
DDX19A-209ENST00000566574 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
DDX19A-209ENST00000566574 ABCC9O60706 1549 aa18.73■□□□□ 0.59
DDX19A-209ENST00000566574 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
DDX19A-209ENST00000566574 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
DDX19A-209ENST00000566574 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
DDX19A-209ENST00000566574 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
DDX19A-209ENST00000566574 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
DDX19A-209ENST00000566574 SMARCA2P51531 1590 aa17.81■□□□□ 0.44
DDX19A-209ENST00000566574 APLP2Q06481 763 aa17.7■□□□□ 0.42
DDX19A-209ENST00000566574 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
DDX19A-209ENST00000566574 PABPN1Q86U42 306 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDX19A-209ENST00000566574 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
DDX19A-209ENST00000566574 EEA1Q15075 1411 aa17.48■□□□□ 0.39
DDX19A-209ENST00000566574 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
DDX19A-209ENST00000566574 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
DDX19A-209ENST00000566574 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
DDX19A-209ENST00000566574 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
DDX19A-209ENST00000566574 HMGXB3Q12766 1538 aa17.27■□□□□ 0.35
DDX19A-209ENST00000566574 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
DDX19A-209ENST00000566574 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
DDX19A-209ENST00000566574 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
DDX19A-209ENST00000566574 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
DDX19A-209ENST00000566574 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
DDX19A-209ENST00000566574 EIF4G1Q04637 1599 aaKnown RBP17.09■□□□□ 0.33
DDX19A-209ENST00000566574 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
DDX19A-209ENST00000566574 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
DDX19A-209ENST00000566574 MROH2BQ7Z745 1585 aa17.05■□□□□ 0.32
DDX19A-209ENST00000566574 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
DDX19A-209ENST00000566574 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
DDX19A-209ENST00000566574 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
DDX19A-209ENST00000566574 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
DDX19A-209ENST00000566574 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
DDX19A-209ENST00000566574 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
DDX19A-209ENST00000566574 BICRAQ9NZM4 1560 aa16.93■□□□□ 0.3
DDX19A-209ENST00000566574 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
DDX19A-209ENST00000566574 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
DDX19A-209ENST00000566574 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
DDX19A-209ENST00000566574 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
DDX19A-209ENST00000566574 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
DDX19A-209ENST00000566574 GOLGA3Q08378 1498 aa16.82■□□□□ 0.28
DDX19A-209ENST00000566574 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
DDX19A-209ENST00000566574 WIZO95785 1651 aa16.8■□□□□ 0.28
DDX19A-209ENST00000566574 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
DDX19A-209ENST00000566574 CFTRP13569 1480 aa16.69■□□□□ 0.26
DDX19A-209ENST00000566574 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
DDX19A-209ENST00000566574 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
DDX19A-209ENST00000566574 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
DDX19A-209ENST00000566574 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
DDX19A-209ENST00000566574 NPM1P06748 294 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX19A-209ENST00000566574 ATP1B4Q9UN42 357 aaPredicted RBP16.59■□□□□ 0.25
DDX19A-209ENST00000566574 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
DDX19A-209ENST00000566574 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.25
DDX19A-209ENST00000566574 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
DDX19A-209ENST00000566574 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
DDX19A-209ENST00000566574 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
DDX19A-209ENST00000566574 SOGA1O94964 1423 aa16.56■□□□□ 0.24
DDX19A-209ENST00000566574 DNMBPQ6XZF7 1577 aa16.53■□□□□ 0.24
DDX19A-209ENST00000566574 CUX2O14529 1486 aa16.52■□□□□ 0.23
DDX19A-209ENST00000566574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
DDX19A-209ENST00000566574 HNRNPUL2Q1KMD3 747 aaKnown RBP16.51■□□□□ 0.23
DDX19A-209ENST00000566574 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
DDX19A-209ENST00000566574 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
DDX19A-209ENST00000566574 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
DDX19A-209ENST00000566574 CLIP1P30622 1438 aa16.44■□□□□ 0.22
DDX19A-209ENST00000566574 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
DDX19A-209ENST00000566574 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
DDX19A-209ENST00000566574 TOP2BQ02880 1626 aa16.43■□□□□ 0.22
DDX19A-209ENST00000566574 FBLN2P98095 1184 aa16.4■□□□□ 0.22
DDX19A-209ENST00000566574 GRIN2BQ13224 1484 aa16.37■□□□□ 0.21
DDX19A-209ENST00000566574 CUL7Q14999 1698 aa16.36■□□□□ 0.21
DDX19A-209ENST00000566574 KIF21BO75037 1637 aa16.33■□□□□ 0.21
DDX19A-209ENST00000566574 CEP162Q5TB80 1403 aa16.33■□□□□ 0.21
DDX19A-209ENST00000566574 EFCAB5A4FU69 1503 aa16.31■□□□□ 0.2
DDX19A-209ENST00000566574 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
DDX19A-209ENST00000566574 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
DDX19A-209ENST00000566574 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
DDX19A-209ENST00000566574 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
DDX19A-209ENST00000566574 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
DDX19A-209ENST00000566574 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
DDX19A-209ENST00000566574 ABCA10Q8WWZ4 1543 aa16.26■□□□□ 0.19
DDX19A-209ENST00000566574 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
DDX19A-209ENST00000566574 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
DDX19A-209ENST00000566574 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
DDX19A-209ENST00000566574 MYT1LQ9UL68 1186 aa16.23■□□□□ 0.19
DDX19A-209ENST00000566574 PLEKHD1A6NEE1 506 aa16.22■□□□□ 0.19
DDX19A-209ENST00000566574 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
DDX19A-209ENST00000566574 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
DDX19A-209ENST00000566574 RSPH4AQ5TD94 716 aa16.17■□□□□ 0.18
DDX19A-209ENST00000566574 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
DDX19A-209ENST00000566574 POLA1P09884 1462 aaPredicted RBP16.09■□□□□ 0.17
DDX19A-209ENST00000566574 TSPY4P0CV99 314 aa16.08■□□□□ 0.17
DDX19A-209ENST00000566574 TSPY10P0CW01 314 aa16.08■□□□□ 0.17
DDX19A-209ENST00000566574 CUX1P39880 1505 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms