RNA–Protein interactions for RNA: ENST00000566416.1

VAC14-207, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 780 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-207ENST00000566416 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
VAC14-207ENST00000566416 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
VAC14-207ENST00000566416 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
VAC14-207ENST00000566416 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
VAC14-207ENST00000566416 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
VAC14-207ENST00000566416 NISCHQ9Y2I1 1504 aa21.74■■□□□ 1.07
VAC14-207ENST00000566416 FOXD1Q16676 465 aa20.91■□□□□ 0.94
VAC14-207ENST00000566416 ADRA2BP18089 450 aa20.65■□□□□ 0.9
VAC14-207ENST00000566416 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
VAC14-207ENST00000566416 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
VAC14-207ENST00000566416 KCNA4P22459 653 aa19.77■□□□□ 0.76
VAC14-207ENST00000566416 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
VAC14-207ENST00000566416 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
VAC14-207ENST00000566416 ABCC9O60706 1549 aa19.15■□□□□ 0.66
VAC14-207ENST00000566416 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
VAC14-207ENST00000566416 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
VAC14-207ENST00000566416 MSH5O43196 834 aa18.99■□□□□ 0.63
VAC14-207ENST00000566416 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
VAC14-207ENST00000566416 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
VAC14-207ENST00000566416 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
VAC14-207ENST00000566416 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
VAC14-207ENST00000566416 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
VAC14-207ENST00000566416 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
VAC14-207ENST00000566416 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
VAC14-207ENST00000566416 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
VAC14-207ENST00000566416 NACADO15069 1562 aa18.3■□□□□ 0.52
VAC14-207ENST00000566416 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
VAC14-207ENST00000566416 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
VAC14-207ENST00000566416 ZBTB22O15209 634 aa18.23■□□□□ 0.51
VAC14-207ENST00000566416 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
VAC14-207ENST00000566416 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
VAC14-207ENST00000566416 MYO15BQ96JP2 1530 aa18.07■□□□□ 0.48
VAC14-207ENST00000566416 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
VAC14-207ENST00000566416 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
VAC14-207ENST00000566416 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
VAC14-207ENST00000566416 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
VAC14-207ENST00000566416 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
VAC14-207ENST00000566416 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
VAC14-207ENST00000566416 SCRIBQ14160 1630 aa17.77■□□□□ 0.44
VAC14-207ENST00000566416 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
VAC14-207ENST00000566416 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
VAC14-207ENST00000566416 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
VAC14-207ENST00000566416 EIF4G1Q04637 1599 aaKnown RBP17.36■□□□□ 0.37
VAC14-207ENST00000566416 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
VAC14-207ENST00000566416 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
VAC14-207ENST00000566416 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
VAC14-207ENST00000566416 CECR2Q9BXF3 1484 aa17.21■□□□□ 0.35
VAC14-207ENST00000566416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
VAC14-207ENST00000566416 DNAJC5Q9H3Z4 198 aa17.04■□□□□ 0.32
VAC14-207ENST00000566416 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
VAC14-207ENST00000566416 SMARCA4P51532 1647 aa16.96■□□□□ 0.3
VAC14-207ENST00000566416 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
VAC14-207ENST00000566416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
VAC14-207ENST00000566416 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
VAC14-207ENST00000566416 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
VAC14-207ENST00000566416 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
VAC14-207ENST00000566416 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
VAC14-207ENST00000566416 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
VAC14-207ENST00000566416 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
VAC14-207ENST00000566416 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
VAC14-207ENST00000566416 FKBP8Q14318 412 aa16.77■□□□□ 0.28
VAC14-207ENST00000566416 MROH2BQ7Z745 1585 aa16.75■□□□□ 0.27
VAC14-207ENST00000566416 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
VAC14-207ENST00000566416 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
VAC14-207ENST00000566416 WIZO95785 1651 aa16.65■□□□□ 0.26
VAC14-207ENST00000566416 APLP2Q06481 763 aa16.57■□□□□ 0.24
VAC14-207ENST00000566416 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
VAC14-207ENST00000566416 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
VAC14-207ENST00000566416 NESP48681 1621 aa16.52■□□□□ 0.23
VAC14-207ENST00000566416 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
VAC14-207ENST00000566416 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
VAC14-207ENST00000566416 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
VAC14-207ENST00000566416 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
VAC14-207ENST00000566416 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
VAC14-207ENST00000566416 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
VAC14-207ENST00000566416 CUX2O14529 1486 aa16.38■□□□□ 0.21
VAC14-207ENST00000566416 RNF39Q9H2S5 420 aa16.37■□□□□ 0.21
VAC14-207ENST00000566416 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
VAC14-207ENST00000566416 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
VAC14-207ENST00000566416 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
VAC14-207ENST00000566416 PRDM2Q13029 1718 aa16.32■□□□□ 0.2
VAC14-207ENST00000566416 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
VAC14-207ENST00000566416 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
VAC14-207ENST00000566416 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
VAC14-207ENST00000566416 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
VAC14-207ENST00000566416 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
VAC14-207ENST00000566416 CFTRP13569 1480 aa16.2■□□□□ 0.18
VAC14-207ENST00000566416 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
VAC14-207ENST00000566416 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
VAC14-207ENST00000566416 MRC2Q9UBG0 1479 aa16.19■□□□□ 0.18
VAC14-207ENST00000566416 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
VAC14-207ENST00000566416 CAPN15O75808 1086 aa16.18■□□□□ 0.18
VAC14-207ENST00000566416 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
VAC14-207ENST00000566416 POLA2Q14181 598 aa16.15■□□□□ 0.18
VAC14-207ENST00000566416 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
VAC14-207ENST00000566416 WDR62O43379 1518 aa16.14■□□□□ 0.17
VAC14-207ENST00000566416 FBLN2P98095 1184 aa16.11■□□□□ 0.17
VAC14-207ENST00000566416 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
VAC14-207ENST00000566416 PROM2Q8N271 834 aa16.01■□□□□ 0.15
VAC14-207ENST00000566416 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms