RNA–Protein interactions for RNA: ENST00000566127.1

SMG1P2-201, Transcript of SMG1 pseudogene 2, humanhuman

BASIC

Gene SMG1P2, Length 4,221 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P2-201ENST00000566127 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
SMG1P2-201ENST00000566127 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
SMG1P2-201ENST00000566127 ABCC9O60706 1549 aa13.33□□□□□ -0.28
SMG1P2-201ENST00000566127 DCAF8L2P0C7V8 631 aa13□□□□□ -0.33
SMG1P2-201ENST00000566127 RB1CC1Q8TDY2 1594 aa12.93□□□□□ -0.34
SMG1P2-201ENST00000566127 NACADO15069 1562 aa12.89□□□□□ -0.35
SMG1P2-201ENST00000566127 MYO15BQ96JP2 1530 aa12.78□□□□□ -0.36
SMG1P2-201ENST00000566127 ZCCHC6Q5VYS8 1495 aaKnown RBP12.71□□□□□ -0.37
SMG1P2-201ENST00000566127 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
SMG1P2-201ENST00000566127 SHROOM4Q9ULL8 1493 aa12.46□□□□□ -0.42
SMG1P2-201ENST00000566127 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMG1P2-201ENST00000566127 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
SMG1P2-201ENST00000566127 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
SMG1P2-201ENST00000566127 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
SMG1P2-201ENST00000566127 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
SMG1P2-201ENST00000566127 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
SMG1P2-201ENST00000566127 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
SMG1P2-201ENST00000566127 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
SMG1P2-201ENST00000566127 BAZ1AQ9NRL2 1556 aaPredicted RBP11.94□□□□□ -0.5
SMG1P2-201ENST00000566127 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
SMG1P2-201ENST00000566127 SMARCA4P51532 1647 aa11.85□□□□□ -0.51
SMG1P2-201ENST00000566127 NCAPD3P42695 1498 aa11.84□□□□□ -0.51
SMG1P2-201ENST00000566127 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
SMG1P2-201ENST00000566127 ATAD2BQ9ULI0 1458 aa11.81□□□□□ -0.52
SMG1P2-201ENST00000566127 HMGXB3Q12766 1538 aa11.79□□□□□ -0.52
SMG1P2-201ENST00000566127 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
SMG1P2-201ENST00000566127 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
SMG1P2-201ENST00000566127 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
SMG1P2-201ENST00000566127 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
SMG1P2-201ENST00000566127 PDS5BQ9NTI5 1447 aa11.61□□□□□ -0.55
SMG1P2-201ENST00000566127 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
SMG1P2-201ENST00000566127 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
SMG1P2-201ENST00000566127 WIZO95785 1651 aa11.55□□□□□ -0.56
SMG1P2-201ENST00000566127 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
SMG1P2-201ENST00000566127 CUX2O14529 1486 aa11.49□□□□□ -0.57
SMG1P2-201ENST00000566127 SUPT5HO00267 1087 aaKnown RBP11.49□□□□□ -0.57
SMG1P2-201ENST00000566127 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
SMG1P2-201ENST00000566127 NESP48681 1621 aa11.42□□□□□ -0.58
SMG1P2-201ENST00000566127 CFTRP13569 1480 aa11.4□□□□□ -0.58
SMG1P2-201ENST00000566127 MRC2Q9UBG0 1479 aa11.4□□□□□ -0.58
SMG1P2-201ENST00000566127 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
SMG1P2-201ENST00000566127 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
SMG1P2-201ENST00000566127 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
SMG1P2-201ENST00000566127 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
SMG1P2-201ENST00000566127 PRDM2Q13029 1718 aa11.27□□□□□ -0.6
SMG1P2-201ENST00000566127 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
SMG1P2-201ENST00000566127 WDR62O43379 1518 aa11.26□□□□□ -0.61
SMG1P2-201ENST00000566127 IFT140Q96RY7 1462 aa11.21□□□□□ -0.62
SMG1P2-201ENST00000566127 DNMBPQ6XZF7 1577 aa11.19□□□□□ -0.62
SMG1P2-201ENST00000566127 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
SMG1P2-201ENST00000566127 URB2Q14146 1524 aaKnown RBP11.15□□□□□ -0.62
SMG1P2-201ENST00000566127 SOGA1O94964 1423 aa11.11□□□□□ -0.63
SMG1P2-201ENST00000566127 DNAJC5Q9H3Z4 198 aa11.09□□□□□ -0.63
SMG1P2-201ENST00000566127 OSCARQ8IYS5 282 aa11.08□□□□□ -0.64
SMG1P2-201ENST00000566127 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.64
SMG1P2-201ENST00000566127 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
SMG1P2-201ENST00000566127 FGD5Q6ZNL6 1462 aa11.05□□□□□ -0.64
SMG1P2-201ENST00000566127 POLA1P09884 1462 aaPredicted RBP11.04□□□□□ -0.64
SMG1P2-201ENST00000566127 FBLN2P98095 1184 aa11.04□□□□□ -0.64
SMG1P2-201ENST00000566127 CHMP7Q8WUX9 453 aaPredicted RBP11.02□□□□□ -0.64
SMG1P2-201ENST00000566127 CUX1P39880 1505 aa11□□□□□ -0.65
SMG1P2-201ENST00000566127 GRIN2BQ13224 1484 aa11□□□□□ -0.65
SMG1P2-201ENST00000566127 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
SMG1P2-201ENST00000566127 RAD54L2Q9Y4B4 1467 aa10.97□□□□□ -0.65
SMG1P2-201ENST00000566127 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
SMG1P2-201ENST00000566127 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.65
SMG1P2-201ENST00000566127 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
SMG1P2-201ENST00000566127 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.65
SMG1P2-201ENST00000566127 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.662e-9■■■■■ 39.4
SMG1P2-201ENST00000566127 ABCA10Q8WWZ4 1543 aa10.96□□□□□ -0.66
SMG1P2-201ENST00000566127 EIF4G3O43432 1585 aaKnown RBP10.95□□□□□ -0.66
SMG1P2-201ENST00000566127 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
SMG1P2-201ENST00000566127 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
SMG1P2-201ENST00000566127 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
SMG1P2-201ENST00000566127 BIVM-ERCC5R4GMW8 1640 aa10.94□□□□□ -0.66
SMG1P2-201ENST00000566127 KIF27Q86VH2 1401 aa10.93□□□□□ -0.66
SMG1P2-201ENST00000566127 SNAPC4Q5SXM2 1469 aa10.9□□□□□ -0.66
SMG1P2-201ENST00000566127 SYNJ2O15056 1496 aa10.9□□□□□ -0.67
SMG1P2-201ENST00000566127 SYNJ1O43426 1573 aa10.9□□□□□ -0.67
SMG1P2-201ENST00000566127 FHAD1B1AJZ9 1412 aa10.88□□□□□ -0.67
SMG1P2-201ENST00000566127 ERICH3Q5RHP9 1530 aa10.86□□□□□ -0.67
SMG1P2-201ENST00000566127 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
SMG1P2-201ENST00000566127 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
SMG1P2-201ENST00000566127 GRIN2AQ12879 1464 aa10.79□□□□□ -0.68
SMG1P2-201ENST00000566127 CHD1O14646 1710 aa10.79□□□□□ -0.68
SMG1P2-201ENST00000566127 EEA1Q15075 1411 aa10.79□□□□□ -0.68
SMG1P2-201ENST00000566127 CUL7Q14999 1698 aa10.78□□□□□ -0.68
SMG1P2-201ENST00000566127 ADAMTS12P58397 1594 aa10.77□□□□□ -0.68
SMG1P2-201ENST00000566127 CARMIL1Q5VZK9 1371 aa10.77□□□□□ -0.68
SMG1P2-201ENST00000566127 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMG1P2-201ENST00000566127 CARMIL2Q6F5E8 1435 aa10.74□□□□□ -0.69
SMG1P2-201ENST00000566127 IGF1RP08069 1367 aa10.73□□□□□ -0.69
SMG1P2-201ENST00000566127 CYB5RLQ6IPT4 315 aa10.73□□□□□ -0.69
SMG1P2-201ENST00000566127 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
SMG1P2-201ENST00000566127 NUP160Q12769 1436 aa10.71□□□□□ -0.69
SMG1P2-201ENST00000566127 JPH4Q96JJ6 628 aa10.71□□□□□ -0.7
SMG1P2-201ENST00000566127 RAPGEF2Q9Y4G8 1499 aa10.71□□□□□ -0.7
SMG1P2-201ENST00000566127 CSRNP3Q8WYN3 585 aa10.7□□□□□ -0.7
SMG1P2-201ENST00000566127 CLASP1Q7Z460 1538 aa10.69□□□□□ -0.7
SMG1P2-201ENST00000566127 KIAA0586Q9BVV6 1533 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms