RNA–Protein interactions for RNA: ENST00000565813.1

STUB1-206, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 337 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-206ENST00000565813 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
STUB1-206ENST00000565813 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.77
STUB1-206ENST00000565813 ABCC9O60706 1549 aa25.91■■□□□ 1.74
STUB1-206ENST00000565813 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
STUB1-206ENST00000565813 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
STUB1-206ENST00000565813 NACADO15069 1562 aa24.64■■□□□ 1.54
STUB1-206ENST00000565813 ZCCHC6Q5VYS8 1495 aaKnown RBP24.42■■□□□ 1.5
STUB1-206ENST00000565813 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
STUB1-206ENST00000565813 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
STUB1-206ENST00000565813 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.47
STUB1-206ENST00000565813 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
STUB1-206ENST00000565813 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
STUB1-206ENST00000565813 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
STUB1-206ENST00000565813 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
STUB1-206ENST00000565813 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
STUB1-206ENST00000565813 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
STUB1-206ENST00000565813 CC2D2AQ9P2K1 1620 aa23.36■■□□□ 1.33
STUB1-206ENST00000565813 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
STUB1-206ENST00000565813 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
STUB1-206ENST00000565813 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
STUB1-206ENST00000565813 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
STUB1-206ENST00000565813 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
STUB1-206ENST00000565813 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
STUB1-206ENST00000565813 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
STUB1-206ENST00000565813 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
STUB1-206ENST00000565813 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
STUB1-206ENST00000565813 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
STUB1-206ENST00000565813 WIZO95785 1651 aa22.42■■□□□ 1.18
STUB1-206ENST00000565813 ERCC6Q03468 1493 aa22.36■■□□□ 1.17
STUB1-206ENST00000565813 NESP48681 1621 aa22.35■■□□□ 1.17
STUB1-206ENST00000565813 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
STUB1-206ENST00000565813 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
STUB1-206ENST00000565813 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
STUB1-206ENST00000565813 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
STUB1-206ENST00000565813 CUX2O14529 1486 aa22.08■■□□□ 1.12
STUB1-206ENST00000565813 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
STUB1-206ENST00000565813 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
STUB1-206ENST00000565813 THOC2Q8NI27 1593 aaKnown RBP21.97■■□□□ 1.11
STUB1-206ENST00000565813 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
STUB1-206ENST00000565813 CFTRP13569 1480 aa21.91■■□□□ 1.1
STUB1-206ENST00000565813 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
STUB1-206ENST00000565813 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
STUB1-206ENST00000565813 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
STUB1-206ENST00000565813 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
STUB1-206ENST00000565813 WDR62O43379 1518 aa21.76■■□□□ 1.07
STUB1-206ENST00000565813 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
STUB1-206ENST00000565813 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
STUB1-206ENST00000565813 DNAJC5Q9H3Z4 198 aa21.65■■□□□ 1.06
STUB1-206ENST00000565813 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
STUB1-206ENST00000565813 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
STUB1-206ENST00000565813 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
STUB1-206ENST00000565813 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
STUB1-206ENST00000565813 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
STUB1-206ENST00000565813 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
STUB1-206ENST00000565813 CUX1P39880 1505 aa21.27■■□□□ 1
STUB1-206ENST00000565813 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
STUB1-206ENST00000565813 FGD5Q6ZNL6 1462 aa21.26■□□□□ 0.99
STUB1-206ENST00000565813 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
STUB1-206ENST00000565813 SOGA1O94964 1423 aa21.24■□□□□ 0.99
STUB1-206ENST00000565813 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
STUB1-206ENST00000565813 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.99
STUB1-206ENST00000565813 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
STUB1-206ENST00000565813 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
STUB1-206ENST00000565813 FBLN2P98095 1184 aa21.12■□□□□ 0.97
STUB1-206ENST00000565813 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
STUB1-206ENST00000565813 SYNJ1O43426 1573 aa21.04■□□□□ 0.96
STUB1-206ENST00000565813 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
STUB1-206ENST00000565813 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
STUB1-206ENST00000565813 TRIM41Q8WV44 630 aa21.01■□□□□ 0.95
STUB1-206ENST00000565813 CHD1O14646 1710 aa21.01■□□□□ 0.95
STUB1-206ENST00000565813 WDR97A6NE52 1622 aa21■□□□□ 0.95
STUB1-206ENST00000565813 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
STUB1-206ENST00000565813 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
STUB1-206ENST00000565813 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
STUB1-206ENST00000565813 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
STUB1-206ENST00000565813 CHMP7Q8WUX9 453 aaPredicted RBP20.97■□□□□ 0.95
STUB1-206ENST00000565813 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
STUB1-206ENST00000565813 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
STUB1-206ENST00000565813 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
STUB1-206ENST00000565813 SYNJ2O15056 1496 aa20.88■□□□□ 0.93
STUB1-206ENST00000565813 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
STUB1-206ENST00000565813 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
STUB1-206ENST00000565813 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
STUB1-206ENST00000565813 ARHGEF11O15085 1522 aa20.83■□□□□ 0.93
STUB1-206ENST00000565813 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
STUB1-206ENST00000565813 CLASP1Q7Z460 1538 aa20.73■□□□□ 0.91
STUB1-206ENST00000565813 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
STUB1-206ENST00000565813 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
STUB1-206ENST00000565813 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
STUB1-206ENST00000565813 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
STUB1-206ENST00000565813 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
STUB1-206ENST00000565813 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
STUB1-206ENST00000565813 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
STUB1-206ENST00000565813 NUP160Q12769 1436 aa20.61■□□□□ 0.89
STUB1-206ENST00000565813 IGF1RP08069 1367 aa20.58■□□□□ 0.88
STUB1-206ENST00000565813 CUL7Q14999 1698 aa20.51■□□□□ 0.87
STUB1-206ENST00000565813 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
STUB1-206ENST00000565813 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
STUB1-206ENST00000565813 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
STUB1-206ENST00000565813 JPH4Q96JJ6 628 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms