RNA–Protein interactions for RNA: ENST00000565389.1

CBFB-206, Transcript of core-binding factor subunit beta, humanhuman

TSL 1 (best)

Gene CBFB, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-206ENST00000565389 AEBP2Q6ZN18 517 aaPredicted RBP29.7■■■□□ 2.35
CBFB-206ENST00000565389 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
CBFB-206ENST00000565389 PHF23Q9BUL5 403 aaPredicted RBP25.26■■□□□ 1.63
CBFB-206ENST00000565389 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
CBFB-206ENST00000565389 FOXD1Q16676 465 aa23.46■■□□□ 1.35
CBFB-206ENST00000565389 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
CBFB-206ENST00000565389 NISCHQ9Y2I1 1504 aa22.75■■□□□ 1.23
CBFB-206ENST00000565389 ADRA2BP18089 450 aa22.37■■□□□ 1.17
CBFB-206ENST00000565389 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
CBFB-206ENST00000565389 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
CBFB-206ENST00000565389 MSH5O43196 834 aa21.7■■□□□ 1.06
CBFB-206ENST00000565389 ABCC9O60706 1549 aa20.55■□□□□ 0.88
CBFB-206ENST00000565389 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
CBFB-206ENST00000565389 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
CBFB-206ENST00000565389 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
CBFB-206ENST00000565389 MAPK8IP2Q13387 824 aaPredicted RBP20.37■□□□□ 0.85
CBFB-206ENST00000565389 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
CBFB-206ENST00000565389 DMRT2Q9Y5R5 561 aa20.09■□□□□ 0.81
CBFB-206ENST00000565389 CNKSR2Q8WXI2 1034 aa19.91■□□□□ 0.78
CBFB-206ENST00000565389 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
CBFB-206ENST00000565389 KCNA4P22459 653 aa19.72■□□□□ 0.75
CBFB-206ENST00000565389 RNF216Q9NWF9 866 aaPredicted RBP19.58■□□□□ 0.72
CBFB-206ENST00000565389 NPM3O75607 178 aaKnown RBP19.56■□□□□ 0.72
CBFB-206ENST00000565389 HOXD11P31277 338 aaPredicted RBP19.56■□□□□ 0.72
CBFB-206ENST00000565389 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
CBFB-206ENST00000565389 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
CBFB-206ENST00000565389 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
CBFB-206ENST00000565389 NACADO15069 1562 aa19.32■□□□□ 0.68
CBFB-206ENST00000565389 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
CBFB-206ENST00000565389 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
CBFB-206ENST00000565389 DCAF8L2P0C7V8 631 aa19.06■□□□□ 0.64
CBFB-206ENST00000565389 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
CBFB-206ENST00000565389 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
CBFB-206ENST00000565389 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
CBFB-206ENST00000565389 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
CBFB-206ENST00000565389 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
CBFB-206ENST00000565389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.584e-6■■■□□ 17.8
CBFB-206ENST00000565389 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
CBFB-206ENST00000565389 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
CBFB-206ENST00000565389 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
CBFB-206ENST00000565389 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
CBFB-206ENST00000565389 EIF4G1Q04637 1599 aaKnown RBP18.52■□□□□ 0.56
CBFB-206ENST00000565389 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
CBFB-206ENST00000565389 CECR2Q9BXF3 1484 aa18.47■□□□□ 0.55
CBFB-206ENST00000565389 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
CBFB-206ENST00000565389 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
CBFB-206ENST00000565389 C1QBPQ07021 282 aaKnown RBP18.32■□□□□ 0.52
CBFB-206ENST00000565389 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
CBFB-206ENST00000565389 ZBTB22O15209 634 aa18.14■□□□□ 0.49
CBFB-206ENST00000565389 MYCNP04198 464 aaPredicted RBP18.07■□□□□ 0.48
CBFB-206ENST00000565389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
CBFB-206ENST00000565389 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
CBFB-206ENST00000565389 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
CBFB-206ENST00000565389 SAMD1Q6SPF0 538 aaPredicted RBP17.94■□□□□ 0.46
CBFB-206ENST00000565389 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
CBFB-206ENST00000565389 CAPN15O75808 1086 aa17.89■□□□□ 0.45
CBFB-206ENST00000565389 APLP2Q06481 763 aa17.87■□□□□ 0.45
CBFB-206ENST00000565389 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
CBFB-206ENST00000565389 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
CBFB-206ENST00000565389 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
CBFB-206ENST00000565389 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
CBFB-206ENST00000565389 TRHP20396 242 aaPredicted RBP17.75■□□□□ 0.43
CBFB-206ENST00000565389 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
CBFB-206ENST00000565389 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
CBFB-206ENST00000565389 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
CBFB-206ENST00000565389 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
CBFB-206ENST00000565389 NESP48681 1621 aa17.69■□□□□ 0.42
CBFB-206ENST00000565389 CUX2O14529 1486 aa17.68■□□□□ 0.42
CBFB-206ENST00000565389 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
CBFB-206ENST00000565389 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
CBFB-206ENST00000565389 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
CBFB-206ENST00000565389 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
CBFB-206ENST00000565389 DSG3P32926 999 aa17.6■□□□□ 0.41
CBFB-206ENST00000565389 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
CBFB-206ENST00000565389 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
CBFB-206ENST00000565389 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
CBFB-206ENST00000565389 ABCB7O75027 752 aa17.55■□□□□ 0.4
CBFB-206ENST00000565389 ATXN8OSP0DMR3 200 aa17.53■□□□□ 0.4
CBFB-206ENST00000565389 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
CBFB-206ENST00000565389 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
CBFB-206ENST00000565389 WIZO95785 1651 aa17.41■□□□□ 0.38
CBFB-206ENST00000565389 POLA2Q14181 598 aa17.37■□□□□ 0.37
CBFB-206ENST00000565389 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
CBFB-206ENST00000565389 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
CBFB-206ENST00000565389 WDR62O43379 1518 aa17.22■□□□□ 0.35
CBFB-206ENST00000565389 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
CBFB-206ENST00000565389 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
CBFB-206ENST00000565389 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
CBFB-206ENST00000565389 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
CBFB-206ENST00000565389 FANCD2Q9BXW9 1451 aa17.1■□□□□ 0.33
CBFB-206ENST00000565389 CFTRP13569 1480 aa17.08■□□□□ 0.32
CBFB-206ENST00000565389 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
CBFB-206ENST00000565389 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
CBFB-206ENST00000565389 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
CBFB-206ENST00000565389 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
CBFB-206ENST00000565389 FBLN2P98095 1184 aa16.9■□□□□ 0.3
CBFB-206ENST00000565389 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
CBFB-206ENST00000565389 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
CBFB-206ENST00000565389 MKRN4PQ13434 485 aaPredicted RBP16.84■□□□□ 0.29
CBFB-206ENST00000565389 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms