RNA–Protein interactions for RNA: ENST00000564626.1

POLR2C-206, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 518 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-206ENST00000564626 AEBP2Q6ZN18 517 aaPredicted RBP26.38■■□□□ 1.81
POLR2C-206ENST00000564626 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
POLR2C-206ENST00000564626 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
POLR2C-206ENST00000564626 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
POLR2C-206ENST00000564626 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
POLR2C-206ENST00000564626 FOXD1Q16676 465 aa20.73■□□□□ 0.91
POLR2C-206ENST00000564626 NISCHQ9Y2I1 1504 aa20.36■□□□□ 0.85
POLR2C-206ENST00000564626 ADRA2BP18089 450 aa20.06■□□□□ 0.8
POLR2C-206ENST00000564626 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
POLR2C-206ENST00000564626 PIAS4Q8N2W9 510 aaPredicted RBP19.59■□□□□ 0.73
POLR2C-206ENST00000564626 MSH5O43196 834 aa19.03■□□□□ 0.64
POLR2C-206ENST00000564626 ABCC9O60706 1549 aa18.64■□□□□ 0.57
POLR2C-206ENST00000564626 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
POLR2C-206ENST00000564626 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
POLR2C-206ENST00000564626 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
POLR2C-206ENST00000564626 KCNA4P22459 653 aa18.29■□□□□ 0.52
POLR2C-206ENST00000564626 SCAF1Q9H7N4 1312 aaKnown RBP18.26■□□□□ 0.51
POLR2C-206ENST00000564626 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
POLR2C-206ENST00000564626 NCBP3Q53F19 620 aaKnown RBP18.06■□□□□ 0.48
POLR2C-206ENST00000564626 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
POLR2C-206ENST00000564626 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
POLR2C-206ENST00000564626 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
POLR2C-206ENST00000564626 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
POLR2C-206ENST00000564626 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
POLR2C-206ENST00000564626 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
POLR2C-206ENST00000564626 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
POLR2C-206ENST00000564626 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
POLR2C-206ENST00000564626 NACADO15069 1562 aa17.4■□□□□ 0.38
POLR2C-206ENST00000564626 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
POLR2C-206ENST00000564626 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
POLR2C-206ENST00000564626 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
POLR2C-206ENST00000564626 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
POLR2C-206ENST00000564626 EHMT2Q96KQ7 1210 aa17.13■□□□□ 0.33
POLR2C-206ENST00000564626 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
POLR2C-206ENST00000564626 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
POLR2C-206ENST00000564626 ZBTB22O15209 634 aa16.85■□□□□ 0.29
POLR2C-206ENST00000564626 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
POLR2C-206ENST00000564626 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
POLR2C-206ENST00000564626 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
POLR2C-206ENST00000564626 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
POLR2C-206ENST00000564626 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
POLR2C-206ENST00000564626 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
POLR2C-206ENST00000564626 DCAF1Q9Y4B6 1507 aa16.76■□□□□ 0.27
POLR2C-206ENST00000564626 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
POLR2C-206ENST00000564626 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
POLR2C-206ENST00000564626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
POLR2C-206ENST00000564626 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
POLR2C-206ENST00000564626 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
POLR2C-206ENST00000564626 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
POLR2C-206ENST00000564626 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
POLR2C-206ENST00000564626 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
POLR2C-206ENST00000564626 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
POLR2C-206ENST00000564626 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
POLR2C-206ENST00000564626 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
POLR2C-206ENST00000564626 CUX2O14529 1486 aa16.13■□□□□ 0.17
POLR2C-206ENST00000564626 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
POLR2C-206ENST00000564626 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
POLR2C-206ENST00000564626 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
POLR2C-206ENST00000564626 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
POLR2C-206ENST00000564626 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
POLR2C-206ENST00000564626 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
POLR2C-206ENST00000564626 APLP2Q06481 763 aa16.01■□□□□ 0.15
POLR2C-206ENST00000564626 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
POLR2C-206ENST00000564626 NESP48681 1621 aa15.94■□□□□ 0.14
POLR2C-206ENST00000564626 SMARCA2P51531 1590 aa15.93■□□□□ 0.14
POLR2C-206ENST00000564626 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
POLR2C-206ENST00000564626 CAPN15O75808 1086 aa15.92■□□□□ 0.14
POLR2C-206ENST00000564626 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
POLR2C-206ENST00000564626 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
POLR2C-206ENST00000564626 BAZ1BQ9UIG0 1483 aaKnown RBP15.85■□□□□ 0.13
POLR2C-206ENST00000564626 CACNB1Q02641 598 aaPredicted RBP15.85■□□□□ 0.13
POLR2C-206ENST00000564626 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
POLR2C-206ENST00000564626 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
POLR2C-206ENST00000564626 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
POLR2C-206ENST00000564626 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
POLR2C-206ENST00000564626 LAMC3Q9Y6N6 1575 aa15.74■□□□□ 0.11
POLR2C-206ENST00000564626 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
POLR2C-206ENST00000564626 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
POLR2C-206ENST00000564626 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
POLR2C-206ENST00000564626 ABCB7O75027 752 aa15.66■□□□□ 0.1
POLR2C-206ENST00000564626 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
POLR2C-206ENST00000564626 POLA2Q14181 598 aa15.62■□□□□ 0.09
POLR2C-206ENST00000564626 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
POLR2C-206ENST00000564626 DSG3P32926 999 aa15.59■□□□□ 0.09
POLR2C-206ENST00000564626 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
POLR2C-206ENST00000564626 WDR62O43379 1518 aa15.53■□□□□ 0.08
POLR2C-206ENST00000564626 WIZO95785 1651 aa15.48■□□□□ 0.07
POLR2C-206ENST00000564626 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
POLR2C-206ENST00000564626 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
POLR2C-206ENST00000564626 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
POLR2C-206ENST00000564626 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
POLR2C-206ENST00000564626 CFTRP13569 1480 aa15.36■□□□□ 0.05
POLR2C-206ENST00000564626 FBLN2P98095 1184 aa15.33■□□□□ 0.04
POLR2C-206ENST00000564626 URB2Q14146 1524 aaKnown RBP15.32■□□□□ 0.04
POLR2C-206ENST00000564626 ZBTB12Q9Y330 459 aaPredicted RBP15.31■□□□□ 0.04
POLR2C-206ENST00000564626 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
POLR2C-206ENST00000564626 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.04
POLR2C-206ENST00000564626 FKBP8Q14318 412 aa15.22■□□□□ 0.03
POLR2C-206ENST00000564626 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
POLR2C-206ENST00000564626 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms