RNA–Protein interactions for RNA: ENST00000563185.6

NAE1-209, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-209ENST00000563185 NISCHQ9Y2I1 1504 aa52.45■■■■■ 5.99
NAE1-209ENST00000563185 CCDC180Q9P1Z9 1646 aa46.67■■■■■ 5.06
NAE1-209ENST00000563185 ABCC9O60706 1549 aa45.99■■■■■ 4.95
NAE1-209ENST00000563185 RB1CC1Q8TDY2 1594 aa44.12■■■■■ 4.65
NAE1-209ENST00000563185 DCAF8L2P0C7V8 631 aa44.07■■■■■ 4.65
NAE1-209ENST00000563185 NACADO15069 1562 aa44.01■■■■■ 4.64
NAE1-209ENST00000563185 MYO15BQ96JP2 1530 aa43.67■■■■■ 4.58
NAE1-209ENST00000563185 ZCCHC6Q5VYS8 1495 aaKnown RBP43.61■■■■■ 4.57
NAE1-209ENST00000563185 DCAF1Q9Y4B6 1507 aa43.38■■■■■ 4.53
NAE1-209ENST00000563185 PABPN1Q86U42 306 aaKnown RBP eCLIP43■■■■■ 4.47
NAE1-209ENST00000563185 UNC13AQ9UPW8 1703 aa42.96■■■■■ 4.47
NAE1-209ENST00000563185 BICRAQ9NZM4 1560 aa42.73■■■■■ 4.43
NAE1-209ENST00000563185 SCRIBQ14160 1630 aa42.6■■■■■ 4.41
NAE1-209ENST00000563185 DNAJC5BQ9UF47 199 aa42.46■■■■■ 4.39
NAE1-209ENST00000563185 SHROOM4Q9ULL8 1493 aa42.34■■■■■ 4.37
NAE1-209ENST00000563185 EIF4G1Q04637 1599 aaKnown RBP41.67■■■■■ 4.26
NAE1-209ENST00000563185 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
NAE1-209ENST00000563185 CECR2Q9BXF3 1484 aa41.37■■■■■ 4.21
NAE1-209ENST00000563185 SMARCA4P51532 1647 aa40.71■■■■■ 4.11
NAE1-209ENST00000563185 BAZ1AQ9NRL2 1556 aaPredicted RBP40.67■■■■■ 4.1
NAE1-209ENST00000563185 NCAPD3P42695 1498 aa40.64■■■■■ 4.1
NAE1-209ENST00000563185 ATAD2BQ9ULI0 1458 aa40.61■■■■■ 4.09
NAE1-209ENST00000563185 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
NAE1-209ENST00000563185 MROH2BQ7Z745 1585 aa40.4■■■■■ 4.06
NAE1-209ENST00000563185 HMGXB3Q12766 1538 aa40.37■■■■■ 4.05
NAE1-209ENST00000563185 PEG3Q9GZU2 1588 aa40.32■■■■■ 4.05
NAE1-209ENST00000563185 BAZ1BQ9UIG0 1483 aaKnown RBP40.28■■■■■ 4.04
NAE1-209ENST00000563185 WIZO95785 1651 aa39.91■■■■□ 3.98
NAE1-209ENST00000563185 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
NAE1-209ENST00000563185 ERCC6Q03468 1493 aa39.71■■■■□ 3.95
NAE1-209ENST00000563185 NESP48681 1621 aa39.7■■■■□ 3.95
NAE1-209ENST00000563185 LAMC3Q9Y6N6 1575 aa39.57■■■■□ 3.92
NAE1-209ENST00000563185 TOP2AP11388 1531 aaKnown RBP39.51■■■■□ 3.92
NAE1-209ENST00000563185 CADPSQ9ULU8 1353 aa39.47■■■■□ 3.91
NAE1-209ENST00000563185 PDS5BQ9NTI5 1447 aa39.4■■■■□ 3.9
NAE1-209ENST00000563185 CUX2O14529 1486 aa39.36■■■■□ 3.89
NAE1-209ENST00000563185 CFTRP13569 1480 aa39.15■■■■□ 3.86
NAE1-209ENST00000563185 KIF21AQ7Z4S6 1674 aa39.15■■■■□ 3.86
NAE1-209ENST00000563185 THOC2Q8NI27 1593 aaKnown RBP39.1■■■■□ 3.85
NAE1-209ENST00000563185 CCDC88BA6NC98 1476 aa39.08■■■■□ 3.85
NAE1-209ENST00000563185 FANCD2Q9BXW9 1451 aa38.98■■■■□ 3.83
NAE1-209ENST00000563185 CEP164Q9UPV0 1460 aa38.97■■■■□ 3.83
NAE1-209ENST00000563185 MRC2Q9UBG0 1479 aa38.96■■■■□ 3.83
NAE1-209ENST00000563185 WDR62O43379 1518 aa38.8■■■■□ 3.8
NAE1-209ENST00000563185 SUPT5HO00267 1087 aaKnown RBP38.76■■■■□ 3.8
NAE1-209ENST00000563185 PRDM2Q13029 1718 aa38.67■■■■□ 3.78
NAE1-209ENST00000563185 URB2Q14146 1524 aaKnown RBP38.58■■■■□ 3.77
NAE1-209ENST00000563185 DNAJC5Q9H3Z4 198 aa38.5■■■■□ 3.75
NAE1-209ENST00000563185 ABCC8Q09428 1581 aa38.35■■■■□ 3.73
NAE1-209ENST00000563185 TOPBP1Q92547 1522 aa38.31■■■■□ 3.72
NAE1-209ENST00000563185 DNMBPQ6XZF7 1577 aa38.23■■■■□ 3.71
NAE1-209ENST00000563185 IFT140Q96RY7 1462 aa38.17■■■■□ 3.7
NAE1-209ENST00000563185 ZNF608Q9ULD9 1512 aaPredicted RBP37.98■■■■□ 3.67
NAE1-209ENST00000563185 POLA1P09884 1462 aaPredicted RBP37.97■■■■□ 3.67
NAE1-209ENST00000563185 CUX1P39880 1505 aa37.92■■■■□ 3.66
NAE1-209ENST00000563185 TARBP1Q13395 1621 aaKnown RBP37.87■■■■□ 3.65
NAE1-209ENST00000563185 SOGA1O94964 1423 aa37.87■■■■□ 3.65
NAE1-209ENST00000563185 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
NAE1-209ENST00000563185 RAD54L2Q9Y4B4 1467 aa37.82■■■■□ 3.64
NAE1-209ENST00000563185 EIF4G3O43432 1585 aaKnown RBP37.78■■■■□ 3.64
NAE1-209ENST00000563185 AQRO60306 1485 aaKnown RBP eCLIP37.77■■■■□ 3.644e-7■■■■□ 21.6
NAE1-209ENST00000563185 OSCARQ8IYS5 282 aa37.77■■■■□ 3.64
NAE1-209ENST00000563185 TDRD9Q8NDG6 1382 aaKnown RBP37.68■■■■□ 3.62
NAE1-209ENST00000563185 WRNQ14191 1432 aaPredicted RBP eCLIP37.63■■■■□ 3.61
NAE1-209ENST00000563185 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
NAE1-209ENST00000563185 TOP2BQ02880 1626 aa37.51■■■■□ 3.6
NAE1-209ENST00000563185 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
NAE1-209ENST00000563185 SYNJ1O43426 1573 aa37.47■■■■□ 3.59
NAE1-209ENST00000563185 ABCA10Q8WWZ4 1543 aa37.47■■■■□ 3.59
NAE1-209ENST00000563185 FBLN2P98095 1184 aa37.45■■■■□ 3.59
NAE1-209ENST00000563185 GRIN2BQ13224 1484 aa37.45■■■■□ 3.59
NAE1-209ENST00000563185 GAPVD1Q14C86 1478 aa37.41■■■■□ 3.58
NAE1-209ENST00000563185 SNAPC4Q5SXM2 1469 aa37.39■■■■□ 3.58
NAE1-209ENST00000563185 MAGI1Q96QZ7 1491 aaPredicted RBP37.35■■■■□ 3.57
NAE1-209ENST00000563185 CHD1O14646 1710 aa37.31■■■■□ 3.56
NAE1-209ENST00000563185 CHMP7Q8WUX9 453 aaPredicted RBP37.31■■■■□ 3.56
NAE1-209ENST00000563185 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
NAE1-209ENST00000563185 PBRM1Q86U86 1689 aa37.21■■■■□ 3.55
NAE1-209ENST00000563185 SYNJ2O15056 1496 aa37.21■■■■□ 3.55
NAE1-209ENST00000563185 TRIM41Q8WV44 630 aa37.15■■■■□ 3.54
NAE1-209ENST00000563185 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
NAE1-209ENST00000563185 RIMBP3CA6NJZ7 1639 aa37.03■■■■□ 3.52
NAE1-209ENST00000563185 RIMBP3BA6NNM3 1639 aa37.03■■■■□ 3.52
NAE1-209ENST00000563185 RIMBP3Q9UFD9 1639 aa37.03■■■■□ 3.52
NAE1-209ENST00000563185 ERICH3Q5RHP9 1530 aa37.02■■■■□ 3.52
NAE1-209ENST00000563185 FHAD1B1AJZ9 1412 aa36.98■■■■□ 3.51
NAE1-209ENST00000563185 ADAMTS12P58397 1594 aa36.96■■■■□ 3.51
NAE1-209ENST00000563185 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.51
NAE1-209ENST00000563185 GRIN2AQ12879 1464 aa36.94■■■■□ 3.5
NAE1-209ENST00000563185 KIF27Q86VH2 1401 aa36.9■■■■□ 3.5
NAE1-209ENST00000563185 CYB5RLQ6IPT4 315 aa36.82■■■■□ 3.48
NAE1-209ENST00000563185 NUP160Q12769 1436 aa36.78■■■■□ 3.48
NAE1-209ENST00000563185 IGF1RP08069 1367 aa36.77■■■■□ 3.48
NAE1-209ENST00000563185 ARAP1Q96P48 1450 aa36.72■■■■□ 3.47
NAE1-209ENST00000563185 CEP170Q5SW79 1584 aa36.71■■■■□ 3.47
NAE1-209ENST00000563185 CUL7Q14999 1698 aa36.6■■■■□ 3.45
NAE1-209ENST00000563185 CARMIL1Q5VZK9 1371 aa36.56■■■■□ 3.44
NAE1-209ENST00000563185 JPH4Q96JJ6 628 aa36.48■■■■□ 3.43
NAE1-209ENST00000563185 SHROOM2Q13796 1616 aa36.46■■■■□ 3.43
NAE1-209ENST00000563185 ERCC6L2Q5T890 1561 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms