RNA–Protein interactions for RNA: ENST00000562848.1

AC012531.1-201, humanhuman

BASIC

Gene AC012531.1, Length 2,680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012531.1-201ENST00000562848 NISCHQ9Y2I1 1504 aa30.8■■■□□ 2.52
AC012531.1-201ENST00000562848 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
AC012531.1-201ENST00000562848 ZCCHC6Q5VYS8 1495 aaKnown RBP25.86■■□□□ 1.73
AC012531.1-201ENST00000562848 DCAF8L2P0C7V8 631 aa25.74■■□□□ 1.71
AC012531.1-201ENST00000562848 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
AC012531.1-201ENST00000562848 ABCC9O60706 1549 aa25.46■■□□□ 1.67
AC012531.1-201ENST00000562848 DCAF1Q9Y4B6 1507 aa25.3■■□□□ 1.64
AC012531.1-201ENST00000562848 MYO15BQ96JP2 1530 aa24.93■■□□□ 1.58
AC012531.1-201ENST00000562848 NACADO15069 1562 aa24.86■■□□□ 1.57
AC012531.1-201ENST00000562848 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
AC012531.1-201ENST00000562848 RB1CC1Q8TDY2 1594 aa24.66■■□□□ 1.54
AC012531.1-201ENST00000562848 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
AC012531.1-201ENST00000562848 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
AC012531.1-201ENST00000562848 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
AC012531.1-201ENST00000562848 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
AC012531.1-201ENST00000562848 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
AC012531.1-201ENST00000562848 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
AC012531.1-201ENST00000562848 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
AC012531.1-201ENST00000562848 BAZ1AQ9NRL2 1556 aaPredicted RBP23.73■■□□□ 1.39
AC012531.1-201ENST00000562848 WIZO95785 1651 aa23.7■■□□□ 1.38
AC012531.1-201ENST00000562848 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
AC012531.1-201ENST00000562848 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
AC012531.1-201ENST00000562848 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.32
AC012531.1-201ENST00000562848 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
AC012531.1-201ENST00000562848 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
AC012531.1-201ENST00000562848 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
AC012531.1-201ENST00000562848 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
AC012531.1-201ENST00000562848 SMARCA2P51531 1590 aa23.17■■□□□ 1.3
AC012531.1-201ENST00000562848 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
AC012531.1-201ENST00000562848 NCAPD3P42695 1498 aa23■■□□□ 1.27
AC012531.1-201ENST00000562848 TRIM41Q8WV44 630 aa22.95■■□□□ 1.27
AC012531.1-201ENST00000562848 CC2D2AQ9P2K1 1620 aa22.94■■□□□ 1.26
AC012531.1-201ENST00000562848 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
AC012531.1-201ENST00000562848 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
AC012531.1-201ENST00000562848 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
AC012531.1-201ENST00000562848 LOC105371045A0A1W2PR82 267 aa22.68■■□□□ 1.22
AC012531.1-201ENST00000562848 DNAJC5BQ9UF47 199 aa22.63■■□□□ 1.21
AC012531.1-201ENST00000562848 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
AC012531.1-201ENST00000562848 CFTRP13569 1480 aa22.55■■□□□ 1.2
AC012531.1-201ENST00000562848 EHMT2Q96KQ7 1210 aa22.53■■□□□ 1.2
AC012531.1-201ENST00000562848 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
AC012531.1-201ENST00000562848 CADPSQ9ULU8 1353 aa22.48■■□□□ 1.19
AC012531.1-201ENST00000562848 SOGA1O94964 1423 aa22.41■■□□□ 1.18
AC012531.1-201ENST00000562848 NESP48681 1621 aa22.39■■□□□ 1.18
AC012531.1-201ENST00000562848 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
AC012531.1-201ENST00000562848 PRDM2Q13029 1718 aa22.31■■□□□ 1.16
AC012531.1-201ENST00000562848 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
AC012531.1-201ENST00000562848 CUX1P39880 1505 aa22.3■■□□□ 1.16
AC012531.1-201ENST00000562848 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
AC012531.1-201ENST00000562848 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
AC012531.1-201ENST00000562848 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
AC012531.1-201ENST00000562848 HRCP23327 699 aa22.18■■□□□ 1.14
AC012531.1-201ENST00000562848 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
AC012531.1-201ENST00000562848 EEA1Q15075 1411 aa22.13■■□□□ 1.13
AC012531.1-201ENST00000562848 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
AC012531.1-201ENST00000562848 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
AC012531.1-201ENST00000562848 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
AC012531.1-201ENST00000562848 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.11
AC012531.1-201ENST00000562848 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
AC012531.1-201ENST00000562848 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
AC012531.1-201ENST00000562848 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
AC012531.1-201ENST00000562848 URB2Q14146 1524 aaKnown RBP21.99■■□□□ 1.11
AC012531.1-201ENST00000562848 KIF27Q86VH2 1401 aa21.95■■□□□ 1.1
AC012531.1-201ENST00000562848 CUX2O14529 1486 aa21.94■■□□□ 1.1
AC012531.1-201ENST00000562848 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
AC012531.1-201ENST00000562848 GOLGA3Q08378 1498 aa21.93■■□□□ 1.1
AC012531.1-201ENST00000562848 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
AC012531.1-201ENST00000562848 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
AC012531.1-201ENST00000562848 TNIKQ9UKE5 1360 aa21.88■■□□□ 1.09
AC012531.1-201ENST00000562848 KIF21BO75037 1637 aa21.88■■□□□ 1.09
AC012531.1-201ENST00000562848 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
AC012531.1-201ENST00000562848 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
AC012531.1-201ENST00000562848 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
AC012531.1-201ENST00000562848 IGF1RP08069 1367 aa21.81■■□□□ 1.08
AC012531.1-201ENST00000562848 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
AC012531.1-201ENST00000562848 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
AC012531.1-201ENST00000562848 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
AC012531.1-201ENST00000562848 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
AC012531.1-201ENST00000562848 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
AC012531.1-201ENST00000562848 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
AC012531.1-201ENST00000562848 ERICH3Q5RHP9 1530 aa21.71■■□□□ 1.07
AC012531.1-201ENST00000562848 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
AC012531.1-201ENST00000562848 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
AC012531.1-201ENST00000562848 CLIP1P30622 1438 aa21.65■■□□□ 1.06
AC012531.1-201ENST00000562848 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.06
AC012531.1-201ENST00000562848 WDR62O43379 1518 aa21.62■■□□□ 1.05
AC012531.1-201ENST00000562848 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
AC012531.1-201ENST00000562848 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
AC012531.1-201ENST00000562848 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
AC012531.1-201ENST00000562848 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
AC012531.1-201ENST00000562848 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
AC012531.1-201ENST00000562848 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
AC012531.1-201ENST00000562848 TRIM26Q12899 539 aaPredicted RBP21.5■■□□□ 1.03
AC012531.1-201ENST00000562848 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
AC012531.1-201ENST00000562848 CUL7Q14999 1698 aa21.48■■□□□ 1.03
AC012531.1-201ENST00000562848 VPS8Q8N3P4 1428 aa21.43■■□□□ 1.02
AC012531.1-201ENST00000562848 PBRM1Q86U86 1689 aa21.42■■□□□ 1.02
AC012531.1-201ENST00000562848 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
AC012531.1-201ENST00000562848 ARHGAP35Q9NRY4 1499 aa21.41■■□□□ 1.02
AC012531.1-201ENST00000562848 GRIN2BQ13224 1484 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms