RNA–Protein interactions for RNA: ENST00000562561.1

AC023300.1-201, humanhuman

TSL 3 BASIC

Gene AC023300.1, Length 382 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023300.1-201ENST00000562561 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
AC023300.1-201ENST00000562561 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
AC023300.1-201ENST00000562561 ABCC9O60706 1549 aa22.93■■□□□ 1.26
AC023300.1-201ENST00000562561 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
AC023300.1-201ENST00000562561 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
AC023300.1-201ENST00000562561 NACADO15069 1562 aa21.9■■□□□ 1.1
AC023300.1-201ENST00000562561 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
AC023300.1-201ENST00000562561 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
AC023300.1-201ENST00000562561 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
AC023300.1-201ENST00000562561 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
AC023300.1-201ENST00000562561 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
AC023300.1-201ENST00000562561 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
AC023300.1-201ENST00000562561 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
AC023300.1-201ENST00000562561 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
AC023300.1-201ENST00000562561 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
AC023300.1-201ENST00000562561 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
AC023300.1-201ENST00000562561 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
AC023300.1-201ENST00000562561 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
AC023300.1-201ENST00000562561 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
AC023300.1-201ENST00000562561 NCAPD3P42695 1498 aa20.19■□□□□ 0.82
AC023300.1-201ENST00000562561 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
AC023300.1-201ENST00000562561 ATAD2BQ9ULI0 1458 aa20.17■□□□□ 0.82
AC023300.1-201ENST00000562561 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
AC023300.1-201ENST00000562561 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
AC023300.1-201ENST00000562561 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
AC023300.1-201ENST00000562561 PEG3Q9GZU2 1588 aa20.02■□□□□ 0.8
AC023300.1-201ENST00000562561 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
AC023300.1-201ENST00000562561 WIZO95785 1651 aa19.84■□□□□ 0.77
AC023300.1-201ENST00000562561 ERCC6Q03468 1493 aa19.8■□□□□ 0.76
AC023300.1-201ENST00000562561 NESP48681 1621 aa19.77■□□□□ 0.76
AC023300.1-201ENST00000562561 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
AC023300.1-201ENST00000562561 LAMC3Q9Y6N6 1575 aa19.71■□□□□ 0.75
AC023300.1-201ENST00000562561 CUX2O14529 1486 aa19.65■□□□□ 0.74
AC023300.1-201ENST00000562561 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
AC023300.1-201ENST00000562561 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
AC023300.1-201ENST00000562561 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
AC023300.1-201ENST00000562561 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
AC023300.1-201ENST00000562561 THOC2Q8NI27 1593 aaKnown RBP19.51■□□□□ 0.71
AC023300.1-201ENST00000562561 CFTRP13569 1480 aa19.42■□□□□ 0.7
AC023300.1-201ENST00000562561 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
AC023300.1-201ENST00000562561 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
AC023300.1-201ENST00000562561 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
AC023300.1-201ENST00000562561 CCDC88BA6NC98 1476 aa19.37■□□□□ 0.69
AC023300.1-201ENST00000562561 WDR62O43379 1518 aa19.32■□□□□ 0.68
AC023300.1-201ENST00000562561 PRDM2Q13029 1718 aa19.32■□□□□ 0.68
AC023300.1-201ENST00000562561 DNAJC5Q9H3Z4 198 aa19.31■□□□□ 0.68
AC023300.1-201ENST00000562561 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
AC023300.1-201ENST00000562561 SUPT5HO00267 1087 aaKnown RBP19.14■□□□□ 0.65
AC023300.1-201ENST00000562561 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
AC023300.1-201ENST00000562561 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
AC023300.1-201ENST00000562561 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
AC023300.1-201ENST00000562561 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
AC023300.1-201ENST00000562561 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
AC023300.1-201ENST00000562561 POLA1P09884 1462 aaPredicted RBP18.85■□□□□ 0.61
AC023300.1-201ENST00000562561 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
AC023300.1-201ENST00000562561 OSCARQ8IYS5 282 aa18.84■□□□□ 0.61
AC023300.1-201ENST00000562561 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
AC023300.1-201ENST00000562561 CUX1P39880 1505 aa18.81■□□□□ 0.6
AC023300.1-201ENST00000562561 SOGA1O94964 1423 aa18.81■□□□□ 0.6
AC023300.1-201ENST00000562561 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
AC023300.1-201ENST00000562561 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
AC023300.1-201ENST00000562561 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.6
AC023300.1-201ENST00000562561 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
AC023300.1-201ENST00000562561 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
AC023300.1-201ENST00000562561 CHD1O14646 1710 aa18.66■□□□□ 0.58
AC023300.1-201ENST00000562561 FBLN2P98095 1184 aa18.65■□□□□ 0.58
AC023300.1-201ENST00000562561 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
AC023300.1-201ENST00000562561 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
AC023300.1-201ENST00000562561 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
AC023300.1-201ENST00000562561 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
AC023300.1-201ENST00000562561 GRIN2BQ13224 1484 aa18.6■□□□□ 0.57
AC023300.1-201ENST00000562561 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
AC023300.1-201ENST00000562561 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
AC023300.1-201ENST00000562561 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
AC023300.1-201ENST00000562561 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
AC023300.1-201ENST00000562561 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
AC023300.1-201ENST00000562561 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
AC023300.1-201ENST00000562561 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
AC023300.1-201ENST00000562561 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
AC023300.1-201ENST00000562561 RIMBP3CA6NJZ7 1639 aa18.53■□□□□ 0.56
AC023300.1-201ENST00000562561 RIMBP3BA6NNM3 1639 aa18.53■□□□□ 0.56
AC023300.1-201ENST00000562561 RIMBP3Q9UFD9 1639 aa18.53■□□□□ 0.56
AC023300.1-201ENST00000562561 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
AC023300.1-201ENST00000562561 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
AC023300.1-201ENST00000562561 CLASP1Q7Z460 1538 aa18.41■□□□□ 0.54
AC023300.1-201ENST00000562561 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
AC023300.1-201ENST00000562561 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
AC023300.1-201ENST00000562561 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
AC023300.1-201ENST00000562561 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
AC023300.1-201ENST00000562561 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
AC023300.1-201ENST00000562561 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
AC023300.1-201ENST00000562561 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
AC023300.1-201ENST00000562561 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
AC023300.1-201ENST00000562561 NUP160Q12769 1436 aa18.26■□□□□ 0.51
AC023300.1-201ENST00000562561 IGF1RP08069 1367 aa18.2■□□□□ 0.5
AC023300.1-201ENST00000562561 CUL7Q14999 1698 aa18.18■□□□□ 0.5
AC023300.1-201ENST00000562561 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
AC023300.1-201ENST00000562561 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
AC023300.1-201ENST00000562561 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
AC023300.1-201ENST00000562561 CARMIL1Q5VZK9 1371 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms