RNA–Protein interactions for RNA: ENST00000562336.5

COX4I1-203, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COX4I1, Length 873 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-203ENST00000562336 AQRO60306 1485 aaKnown RBP eCLIP48.07■■■■■ 5.296e-9■■■■■ 43.9
COX4I1-203ENST00000562336 SUB1P53999 127 aaKnown RBP eCLIP19.61■□□□□ 0.737e-12■■■■■ 28.6
COX4I1-203ENST00000562336 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.88■■□□□ 1.252e-7■■■■■ 27.4
COX4I1-203ENST00000562336 HNRNPKP61978 463 aaKnown RBP eCLIP26.94■■□□□ 1.91e-6■■■■□ 24.3
COX4I1-203ENST00000562336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.3■■■□□ 2.123e-8■■■■□ 22.9
COX4I1-203ENST00000562336 HNRNPMP52272 730 aaKnown RBP eCLIP42.69■■■■■ 4.421e-6■■■■□ 22.9
COX4I1-203ENST00000562336 RPS3P23396 243 aaKnown RBP eCLIP25.59■■□□□ 1.691e-9■■■■□ 22.7
COX4I1-203ENST00000562336 DDX3XO00571 662 aaKnown RBP eCLIP26.94■■□□□ 1.98e-30■■■■□ 19.8
COX4I1-203ENST00000562336 YBX3P16989 372 aaKnown RBP eCLIP36.01■■■■□ 3.361e-21■■■□□ 16.4
COX4I1-203ENST00000562336 LARP4Q71RC2 724 aaKnown RBP eCLIP24.21■■□□□ 1.471e-8■■■□□ 15
COX4I1-203ENST00000562336 PABPC4Q13310 644 aaKnown RBP eCLIP32.33■■■□□ 2.771e-16■■■□□ 14.6
COX4I1-203ENST00000562336 NOLC1Q14978 699 aaKnown RBP eCLIP29.11■■■□□ 2.252e-9■■□□□ 14.5
COX4I1-203ENST00000562336 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.54■■□□□ 1.521e-12■■□□□ 13.6
COX4I1-203ENST00000562336 SF3A3Q12874 501 aaKnown RBP eCLIP23■■□□□ 1.273e-7■■□□□ 13.1
COX4I1-203ENST00000562336 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.85■■□□□ 1.572e-8■■□□□ 13
COX4I1-203ENST00000562336 PCBP2Q15366 365 aaKnown RBP eCLIP24.66■■□□□ 1.542e-6■■□□□ 13
COX4I1-203ENST00000562336 SF3B4Q15427 424 aaKnown RBP eCLIP24.21■■□□□ 1.474e-8■■□□□ 12.6
COX4I1-203ENST00000562336 PUM1Q14671 1186 aaKnown RBP eCLIP28.25■■■□□ 2.118e-8■■□□□ 12.5
COX4I1-203ENST00000562336 U2AF2P26368 475 aaKnown RBP eCLIP29.48■■■□□ 2.313e-7■■□□□ 11.9
COX4I1-203ENST00000562336 EIF3GO75821 320 aaKnown RBP eCLIP18.39■□□□□ 0.531e-7■■□□□ 11.4
COX4I1-203ENST00000562336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.05■■■□□ 2.887e-14■□□□□ 10.5
COX4I1-203ENST00000562336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.74■■■■■ 4.591e-6■□□□□ 10.3
COX4I1-203ENST00000562336 WRNQ14191 1432 aaPredicted RBP eCLIP47.27■■■■■ 5.161e-6■□□□□ 10.2
COX4I1-203ENST00000562336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.65■■■□□ 2.662e-7■□□□□ 9.9
COX4I1-203ENST00000562336 RBM15Q96T37 977 aaKnown RBP eCLIP26.69■■□□□ 1.862e-9■□□□□ 9.8
COX4I1-203ENST00000562336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.49■■■□□ 2.473e-10■□□□□ 9.8
COX4I1-203ENST00000562336 G3BP1Q13283 466 aaKnown RBP eCLIP32.92■■■□□ 2.861e-8■□□□□ 9.8
COX4I1-203ENST00000562336 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.61■■□□□ 1.852e-21■□□□□ 9.2
COX4I1-203ENST00000562336 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.16■■■□□ 2.748e-10■□□□□ 9.1
COX4I1-203ENST00000562336 AATFQ9NY61 560 aaKnown RBP eCLIP32.63■■■□□ 2.816e-6■□□□□ 9.1
COX4I1-203ENST00000562336 PPIGQ13427 754 aaKnown RBP eCLIP31.04■■■□□ 2.564e-16■□□□□ 9
COX4I1-203ENST00000562336 FUSP35637 526 aaKnown RBP eCLIP18.1■□□□□ 0.493e-9■□□□□ 8.2
COX4I1-203ENST00000562336 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.08■■■□□ 2.572e-8■□□□□ 8.1
Retrieved 33 of 33 RNA–protein pairs in 7.3 ms