RNA–Protein interactions for RNA: ENST00000562015.5

CNN2-203, Transcript of calponin 2, humanhuman

TSL 4

Gene CNN2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-203ENST00000562015 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
CNN2-203ENST00000562015 CCDC180Q9P1Z9 1646 aa31.92■■■□□ 2.7
CNN2-203ENST00000562015 ABCC9O60706 1549 aa31.62■■■□□ 2.65
CNN2-203ENST00000562015 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
CNN2-203ENST00000562015 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.42
CNN2-203ENST00000562015 NACADO15069 1562 aa30.07■■■□□ 2.4
CNN2-203ENST00000562015 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
CNN2-203ENST00000562015 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
CNN2-203ENST00000562015 UNC13AQ9UPW8 1703 aa29.6■■■□□ 2.33
CNN2-203ENST00000562015 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
CNN2-203ENST00000562015 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
CNN2-203ENST00000562015 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
CNN2-203ENST00000562015 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
CNN2-203ENST00000562015 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
CNN2-203ENST00000562015 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
CNN2-203ENST00000562015 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
CNN2-203ENST00000562015 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
CNN2-203ENST00000562015 CECR2Q9BXF3 1484 aa28.38■■■□□ 2.13
CNN2-203ENST00000562015 SMARCA4P51532 1647 aa27.89■■■□□ 2.05
CNN2-203ENST00000562015 BAZ1AQ9NRL2 1556 aaPredicted RBP27.79■■■□□ 2.04
CNN2-203ENST00000562015 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
CNN2-203ENST00000562015 NCAPD3P42695 1498 aa27.76■■■□□ 2.03
CNN2-203ENST00000562015 SMARCA2P51531 1590 aa27.71■■■□□ 2.03
CNN2-203ENST00000562015 MROH2BQ7Z745 1585 aa27.69■■■□□ 2.02
CNN2-203ENST00000562015 HMGXB3Q12766 1538 aa27.57■■■□□ 2
CNN2-203ENST00000562015 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
CNN2-203ENST00000562015 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
CNN2-203ENST00000562015 WIZO95785 1651 aa27.43■■□□□ 1.98
CNN2-203ENST00000562015 NESP48681 1621 aa27.3■■□□□ 1.96
CNN2-203ENST00000562015 RSF1Q96T23 1441 aaPredicted RBP27.28■■□□□ 1.96
CNN2-203ENST00000562015 ERCC6Q03468 1493 aa27.25■■□□□ 1.95
CNN2-203ENST00000562015 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
CNN2-203ENST00000562015 TOP2AP11388 1531 aaKnown RBP27.02■■□□□ 1.92
CNN2-203ENST00000562015 CADPSQ9ULU8 1353 aa26.98■■□□□ 1.91
CNN2-203ENST00000562015 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
CNN2-203ENST00000562015 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
CNN2-203ENST00000562015 CUX2O14529 1486 aa26.92■■□□□ 1.9
CNN2-203ENST00000562015 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
CNN2-203ENST00000562015 CCDC88BA6NC98 1476 aa26.76■■□□□ 1.87
CNN2-203ENST00000562015 CFTRP13569 1480 aa26.74■■□□□ 1.87
CNN2-203ENST00000562015 FANCD2Q9BXW9 1451 aa26.7■■□□□ 1.87
CNN2-203ENST00000562015 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
CNN2-203ENST00000562015 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
CNN2-203ENST00000562015 SUPT5HO00267 1087 aaKnown RBP26.61■■□□□ 1.85
CNN2-203ENST00000562015 PRDM2Q13029 1718 aa26.56■■□□□ 1.84
CNN2-203ENST00000562015 WDR62O43379 1518 aa26.55■■□□□ 1.84
CNN2-203ENST00000562015 URB2Q14146 1524 aaKnown RBP26.45■■□□□ 1.83
CNN2-203ENST00000562015 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
CNN2-203ENST00000562015 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
CNN2-203ENST00000562015 DNMBPQ6XZF7 1577 aa26.16■■□□□ 1.78
CNN2-203ENST00000562015 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
CNN2-203ENST00000562015 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
CNN2-203ENST00000562015 ZNF608Q9ULD9 1512 aaPredicted RBP26.09■■□□□ 1.77
CNN2-203ENST00000562015 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
CNN2-203ENST00000562015 CUX1P39880 1505 aa25.98■■□□□ 1.75
CNN2-203ENST00000562015 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
CNN2-203ENST00000562015 TARBP1Q13395 1621 aaKnown RBP25.96■■□□□ 1.75
CNN2-203ENST00000562015 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.741e-6■■■□□ 16.4
CNN2-203ENST00000562015 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
CNN2-203ENST00000562015 SOGA1O94964 1423 aa25.93■■□□□ 1.74
CNN2-203ENST00000562015 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
CNN2-203ENST00000562015 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
CNN2-203ENST00000562015 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
CNN2-203ENST00000562015 FBLN2P98095 1184 aa25.75■■□□□ 1.71
CNN2-203ENST00000562015 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
CNN2-203ENST00000562015 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
CNN2-203ENST00000562015 CHD1O14646 1710 aa25.69■■□□□ 1.7
CNN2-203ENST00000562015 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
CNN2-203ENST00000562015 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
CNN2-203ENST00000562015 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
CNN2-203ENST00000562015 SNAPC4Q5SXM2 1469 aa25.65■■□□□ 1.7
CNN2-203ENST00000562015 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
CNN2-203ENST00000562015 ABCA10Q8WWZ4 1543 aa25.61■■□□□ 1.69
CNN2-203ENST00000562015 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
CNN2-203ENST00000562015 GAPVD1Q14C86 1478 aa25.6■■□□□ 1.69
CNN2-203ENST00000562015 PBRM1Q86U86 1689 aa25.58■■□□□ 1.69
CNN2-203ENST00000562015 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
CNN2-203ENST00000562015 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
CNN2-203ENST00000562015 MAGI1Q96QZ7 1491 aaPredicted RBP25.53■■□□□ 1.68
CNN2-203ENST00000562015 RIMBP3CA6NJZ7 1639 aa25.48■■□□□ 1.67
CNN2-203ENST00000562015 RIMBP3BA6NNM3 1639 aa25.48■■□□□ 1.67
CNN2-203ENST00000562015 RIMBP3Q9UFD9 1639 aa25.48■■□□□ 1.67
CNN2-203ENST00000562015 SYNJ2O15056 1496 aa25.45■■□□□ 1.66
CNN2-203ENST00000562015 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
CNN2-203ENST00000562015 CYB5RLQ6IPT4 315 aa25.32■■□□□ 1.64
CNN2-203ENST00000562015 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
CNN2-203ENST00000562015 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
CNN2-203ENST00000562015 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
CNN2-203ENST00000562015 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
CNN2-203ENST00000562015 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
CNN2-203ENST00000562015 ARAP1Q96P48 1450 aa25.21■■□□□ 1.63
CNN2-203ENST00000562015 KIF27Q86VH2 1401 aa25.2■■□□□ 1.62
CNN2-203ENST00000562015 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
CNN2-203ENST00000562015 IGF1RP08069 1367 aa25.15■■□□□ 1.62
CNN2-203ENST00000562015 NUP160Q12769 1436 aa25.14■■□□□ 1.62
CNN2-203ENST00000562015 ERCC6L2Q5T890 1561 aa25.05■■□□□ 1.6
CNN2-203ENST00000562015 CUL7Q14999 1698 aa25.03■■□□□ 1.6
CNN2-203ENST00000562015 CARMIL1Q5VZK9 1371 aa25.01■■□□□ 1.59
CNN2-203ENST00000562015 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
CNN2-203ENST00000562015 JPH4Q96JJ6 628 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms