RNA–Protein interactions for RNA: ENST00000561840.1

TRAPPC2L-202, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 5 BASIC

Gene TRAPPC2L, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-202ENST00000561840 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
TRAPPC2L-202ENST00000561840 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
TRAPPC2L-202ENST00000561840 ABCC9O60706 1549 aa25.44■■□□□ 1.66
TRAPPC2L-202ENST00000561840 DCAF8L2P0C7V8 631 aa24.36■■□□□ 1.49
TRAPPC2L-202ENST00000561840 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
TRAPPC2L-202ENST00000561840 NACADO15069 1562 aa24.17■■□□□ 1.46
TRAPPC2L-202ENST00000561840 MYO15BQ96JP2 1530 aa23.89■■□□□ 1.41
TRAPPC2L-202ENST00000561840 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
TRAPPC2L-202ENST00000561840 ZCCHC6Q5VYS8 1495 aaKnown RBP23.75■■□□□ 1.39
TRAPPC2L-202ENST00000561840 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
TRAPPC2L-202ENST00000561840 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
TRAPPC2L-202ENST00000561840 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
TRAPPC2L-202ENST00000561840 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
TRAPPC2L-202ENST00000561840 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
TRAPPC2L-202ENST00000561840 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
TRAPPC2L-202ENST00000561840 CC2D2AQ9P2K1 1620 aa22.94■■□□□ 1.26
TRAPPC2L-202ENST00000561840 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
TRAPPC2L-202ENST00000561840 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
TRAPPC2L-202ENST00000561840 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
TRAPPC2L-202ENST00000561840 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
TRAPPC2L-202ENST00000561840 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
TRAPPC2L-202ENST00000561840 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
TRAPPC2L-202ENST00000561840 BAZ1AQ9NRL2 1556 aaPredicted RBP22.24■■□□□ 1.15
TRAPPC2L-202ENST00000561840 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
TRAPPC2L-202ENST00000561840 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
TRAPPC2L-202ENST00000561840 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
TRAPPC2L-202ENST00000561840 PEG3Q9GZU2 1588 aa22.03■■□□□ 1.12
TRAPPC2L-202ENST00000561840 ERCC6Q03468 1493 aa22■■□□□ 1.11
TRAPPC2L-202ENST00000561840 NESP48681 1621 aa21.88■■□□□ 1.09
TRAPPC2L-202ENST00000561840 CUX2O14529 1486 aa21.82■■□□□ 1.08
TRAPPC2L-202ENST00000561840 WIZO95785 1651 aa21.81■■□□□ 1.08
TRAPPC2L-202ENST00000561840 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
TRAPPC2L-202ENST00000561840 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC2L-202ENST00000561840 PDS5BQ9NTI5 1447 aa21.73■■□□□ 1.07
TRAPPC2L-202ENST00000561840 CADPSQ9ULU8 1353 aa21.72■■□□□ 1.07
TRAPPC2L-202ENST00000561840 DNAJC5Q9H3Z4 198 aa21.65■■□□□ 1.06
TRAPPC2L-202ENST00000561840 KIF21AQ7Z4S6 1674 aa21.55■■□□□ 1.04
TRAPPC2L-202ENST00000561840 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
TRAPPC2L-202ENST00000561840 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
TRAPPC2L-202ENST00000561840 CFTRP13569 1480 aa21.45■■□□□ 1.03
TRAPPC2L-202ENST00000561840 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
TRAPPC2L-202ENST00000561840 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
TRAPPC2L-202ENST00000561840 CEP164Q9UPV0 1460 aa21.43■■□□□ 1.02
TRAPPC2L-202ENST00000561840 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
TRAPPC2L-202ENST00000561840 WDR62O43379 1518 aa21.33■■□□□ 1
TRAPPC2L-202ENST00000561840 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
TRAPPC2L-202ENST00000561840 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
TRAPPC2L-202ENST00000561840 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
TRAPPC2L-202ENST00000561840 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
TRAPPC2L-202ENST00000561840 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
TRAPPC2L-202ENST00000561840 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
TRAPPC2L-202ENST00000561840 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
TRAPPC2L-202ENST00000561840 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
TRAPPC2L-202ENST00000561840 ZNF608Q9ULD9 1512 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC2L-202ENST00000561840 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
TRAPPC2L-202ENST00000561840 SOGA1O94964 1423 aa20.83■□□□□ 0.93
TRAPPC2L-202ENST00000561840 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC2L-202ENST00000561840 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.927e-7■■■□□ 15.5
TRAPPC2L-202ENST00000561840 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
TRAPPC2L-202ENST00000561840 FBLN2P98095 1184 aa20.77■□□□□ 0.92
TRAPPC2L-202ENST00000561840 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
TRAPPC2L-202ENST00000561840 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
TRAPPC2L-202ENST00000561840 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
TRAPPC2L-202ENST00000561840 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
TRAPPC2L-202ENST00000561840 CUX1P39880 1505 aa20.72■□□□□ 0.91
TRAPPC2L-202ENST00000561840 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC2L-202ENST00000561840 WDR97A6NE52 1622 aa20.59■□□□□ 0.89
TRAPPC2L-202ENST00000561840 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
TRAPPC2L-202ENST00000561840 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
TRAPPC2L-202ENST00000561840 CHD1O14646 1710 aa20.56■□□□□ 0.88
TRAPPC2L-202ENST00000561840 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
TRAPPC2L-202ENST00000561840 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
TRAPPC2L-202ENST00000561840 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC2L-202ENST00000561840 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
TRAPPC2L-202ENST00000561840 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
TRAPPC2L-202ENST00000561840 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
TRAPPC2L-202ENST00000561840 CYB5RLQ6IPT4 315 aa20.51■□□□□ 0.87
TRAPPC2L-202ENST00000561840 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
TRAPPC2L-202ENST00000561840 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
TRAPPC2L-202ENST00000561840 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
TRAPPC2L-202ENST00000561840 TOP2BQ02880 1626 aa20.45■□□□□ 0.86
TRAPPC2L-202ENST00000561840 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
TRAPPC2L-202ENST00000561840 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
TRAPPC2L-202ENST00000561840 PBRM1Q86U86 1689 aa20.39■□□□□ 0.86
TRAPPC2L-202ENST00000561840 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
TRAPPC2L-202ENST00000561840 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
TRAPPC2L-202ENST00000561840 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
TRAPPC2L-202ENST00000561840 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
TRAPPC2L-202ENST00000561840 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
TRAPPC2L-202ENST00000561840 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
TRAPPC2L-202ENST00000561840 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC2L-202ENST00000561840 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
TRAPPC2L-202ENST00000561840 NUP160Q12769 1436 aa20.18■□□□□ 0.82
TRAPPC2L-202ENST00000561840 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
TRAPPC2L-202ENST00000561840 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
TRAPPC2L-202ENST00000561840 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
TRAPPC2L-202ENST00000561840 IGF1RP08069 1367 aa20.12■□□□□ 0.81
TRAPPC2L-202ENST00000561840 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC2L-202ENST00000561840 ERCC6L2Q5T890 1561 aa20.03■□□□□ 0.8
TRAPPC2L-202ENST00000561840 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms