RNA–Protein interactions for RNA: ENST00000561386.1

LINC02349-201, Transcript of long intergenic non-protein coding RNA 2349, humanhuman

TSL 2 BASIC

Gene LINC02349, Length 963 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02349-201ENST00000561386 AEBP2Q6ZN18 517 aaPredicted RBP34.56■■■■□ 3.12
LINC02349-201ENST00000561386 CHIC1Q5VXU3 224 aa33.55■■■□□ 2.96
LINC02349-201ENST00000561386 PHF23Q9BUL5 403 aaPredicted RBP29.45■■■□□ 2.31
LINC02349-201ENST00000561386 SENP3Q9H4L4 574 aaPredicted RBP29.43■■■□□ 2.3
LINC02349-201ENST00000561386 FOXD1Q16676 465 aa27.32■■□□□ 1.96
LINC02349-201ENST00000561386 PLPPR3Q6T4P5 718 aa27.16■■□□□ 1.94
LINC02349-201ENST00000561386 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
LINC02349-201ENST00000561386 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.77
LINC02349-201ENST00000561386 ADRA2BP18089 450 aa26.05■■□□□ 1.76
LINC02349-201ENST00000561386 PIAS4Q8N2W9 510 aaPredicted RBP25.72■■□□□ 1.71
LINC02349-201ENST00000561386 MSH5O43196 834 aa25.33■■□□□ 1.65
LINC02349-201ENST00000561386 ABCC9O60706 1549 aa24.05■■□□□ 1.44
LINC02349-201ENST00000561386 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
LINC02349-201ENST00000561386 PPP4R3CPQ6ZMV5 832 aa23.89■■□□□ 1.41
LINC02349-201ENST00000561386 MAPK8IP2Q13387 824 aaPredicted RBP23.71■■□□□ 1.39
LINC02349-201ENST00000561386 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
LINC02349-201ENST00000561386 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
LINC02349-201ENST00000561386 DMRT2Q9Y5R5 561 aa23.43■■□□□ 1.34
LINC02349-201ENST00000561386 CNKSR2Q8WXI2 1034 aa23.29■■□□□ 1.32
LINC02349-201ENST00000561386 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
LINC02349-201ENST00000561386 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
LINC02349-201ENST00000561386 KCNA4P22459 653 aa23.02■■□□□ 1.28
LINC02349-201ENST00000561386 RNF216Q9NWF9 866 aaPredicted RBP22.89■■□□□ 1.25
LINC02349-201ENST00000561386 HOXD11P31277 338 aaPredicted RBP22.85■■□□□ 1.25
LINC02349-201ENST00000561386 NPM3O75607 178 aaKnown RBP22.83■■□□□ 1.25
LINC02349-201ENST00000561386 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
LINC02349-201ENST00000561386 DCAF8L1A6NGE4 600 aa22.47■■□□□ 1.19
LINC02349-201ENST00000561386 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
LINC02349-201ENST00000561386 NACADO15069 1562 aa22.29■■□□□ 1.16
LINC02349-201ENST00000561386 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
LINC02349-201ENST00000561386 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
LINC02349-201ENST00000561386 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
LINC02349-201ENST00000561386 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
LINC02349-201ENST00000561386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
LINC02349-201ENST00000561386 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
LINC02349-201ENST00000561386 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
LINC02349-201ENST00000561386 RNF39Q9H2S5 420 aa21.65■■□□□ 1.06
LINC02349-201ENST00000561386 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
LINC02349-201ENST00000561386 SLC4A2P04920 1241 aa21.61■■□□□ 1.05
LINC02349-201ENST00000561386 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
LINC02349-201ENST00000561386 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
LINC02349-201ENST00000561386 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
LINC02349-201ENST00000561386 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
LINC02349-201ENST00000561386 DCAF1Q9Y4B6 1507 aa21.41■■□□□ 1.02
LINC02349-201ENST00000561386 C1QBPQ07021 282 aaKnown RBP21.41■■□□□ 1.02
LINC02349-201ENST00000561386 U3KPZ7 1027 aaPredicted RBP21.38■■□□□ 1.01
LINC02349-201ENST00000561386 CACNB1Q02641 598 aaPredicted RBP21.31■■□□□ 1
LINC02349-201ENST00000561386 DNAJC5Q9H3Z4 198 aa21.31■■□□□ 1
LINC02349-201ENST00000561386 FOXD4L1Q9NU39 408 aa21.27■■□□□ 1
LINC02349-201ENST00000561386 ZBTB22O15209 634 aa21.14■□□□□ 0.97
LINC02349-201ENST00000561386 MYCNP04198 464 aaPredicted RBP21.12■□□□□ 0.97
LINC02349-201ENST00000561386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
LINC02349-201ENST00000561386 HNRNPUL2Q1KMD3 747 aaKnown RBP21.1■□□□□ 0.97
LINC02349-201ENST00000561386 SAMD1Q6SPF0 538 aaPredicted RBP20.99■□□□□ 0.95
LINC02349-201ENST00000561386 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
LINC02349-201ENST00000561386 APLP2Q06481 763 aa20.95■□□□□ 0.94
LINC02349-201ENST00000561386 SPINK5Q9NQ38 1064 aaPredicted RBP20.86■□□□□ 0.93
LINC02349-201ENST00000561386 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
LINC02349-201ENST00000561386 CAPN15O75808 1086 aa20.83■□□□□ 0.93
LINC02349-201ENST00000561386 CUX2O14529 1486 aa20.73■□□□□ 0.91
LINC02349-201ENST00000561386 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
LINC02349-201ENST00000561386 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
LINC02349-201ENST00000561386 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
LINC02349-201ENST00000561386 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
LINC02349-201ENST00000561386 NESP48681 1621 aa20.6■□□□□ 0.89
LINC02349-201ENST00000561386 ATXN8OSP0DMR3 200 aa20.58■□□□□ 0.89
LINC02349-201ENST00000561386 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
LINC02349-201ENST00000561386 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
LINC02349-201ENST00000561386 DSG3P32926 999 aa20.51■□□□□ 0.87
LINC02349-201ENST00000561386 SMARCA4P51532 1647 aa20.42■□□□□ 0.86
LINC02349-201ENST00000561386 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
LINC02349-201ENST00000561386 ABCB7O75027 752 aa20.39■□□□□ 0.85
LINC02349-201ENST00000561386 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
LINC02349-201ENST00000561386 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
LINC02349-201ENST00000561386 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
LINC02349-201ENST00000561386 POLA2Q14181 598 aa20.28■□□□□ 0.84
LINC02349-201ENST00000561386 TRIM41Q8WV44 630 aa20.26■□□□□ 0.83
LINC02349-201ENST00000561386 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
LINC02349-201ENST00000561386 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
LINC02349-201ENST00000561386 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
LINC02349-201ENST00000561386 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
LINC02349-201ENST00000561386 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
LINC02349-201ENST00000561386 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
LINC02349-201ENST00000561386 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
LINC02349-201ENST00000561386 MRC2Q9UBG0 1479 aa19.99■□□□□ 0.79
LINC02349-201ENST00000561386 WDR62O43379 1518 aa19.96■□□□□ 0.79
LINC02349-201ENST00000561386 ZBTB12Q9Y330 459 aaPredicted RBP19.94■□□□□ 0.78
LINC02349-201ENST00000561386 WIZO95785 1651 aa19.91■□□□□ 0.78
LINC02349-201ENST00000561386 CEP164Q9UPV0 1460 aa19.8■□□□□ 0.76
LINC02349-201ENST00000561386 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
LINC02349-201ENST00000561386 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
LINC02349-201ENST00000561386 FBLN2P98095 1184 aa19.76■□□□□ 0.75
LINC02349-201ENST00000561386 URB2Q14146 1524 aaKnown RBP19.72■□□□□ 0.75
LINC02349-201ENST00000561386 CFTRP13569 1480 aa19.7■□□□□ 0.74
LINC02349-201ENST00000561386 MKRN4PQ13434 485 aaPredicted RBP19.63■□□□□ 0.73
LINC02349-201ENST00000561386 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
LINC02349-201ENST00000561386 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
LINC02349-201ENST00000561386 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
LINC02349-201ENST00000561386 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
LINC02349-201ENST00000561386 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms