RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-222ENST00000561212 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
ZEB1-222ENST00000561212 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
ZEB1-222ENST00000561212 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
ZEB1-222ENST00000561212 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
ZEB1-222ENST00000561212 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
ZEB1-222ENST00000561212 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
ZEB1-222ENST00000561212 FOXD1Q16676 465 aa15.21■□□□□ 0.03
ZEB1-222ENST00000561212 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
ZEB1-222ENST00000561212 MSH5O43196 834 aa14.62□□□□□ -0.07
ZEB1-222ENST00000561212 PLPPR3Q6T4P5 718 aa14.31□□□□□ -0.12
ZEB1-222ENST00000561212 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
ZEB1-222ENST00000561212 PIAS4Q8N2W9 510 aaPredicted RBP14.12□□□□□ -0.15
ZEB1-222ENST00000561212 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
ZEB1-222ENST00000561212 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
ZEB1-222ENST00000561212 ADRA2BP18089 450 aa14□□□□□ -0.17
ZEB1-222ENST00000561212 ABCC9O60706 1549 aa13.95□□□□□ -0.18
ZEB1-222ENST00000561212 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
ZEB1-222ENST00000561212 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
ZEB1-222ENST00000561212 NACADO15069 1562 aa13.79□□□□□ -0.2
ZEB1-222ENST00000561212 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
ZEB1-222ENST00000561212 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
ZEB1-222ENST00000561212 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
ZEB1-222ENST00000561212 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
ZEB1-222ENST00000561212 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
ZEB1-222ENST00000561212 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
ZEB1-222ENST00000561212 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
ZEB1-222ENST00000561212 PABPN1Q86U42 306 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZEB1-222ENST00000561212 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
ZEB1-222ENST00000561212 SUPT5HO00267 1087 aaKnown RBP13.08□□□□□ -0.31
ZEB1-222ENST00000561212 MROH2BQ7Z745 1585 aa13.08□□□□□ -0.32
ZEB1-222ENST00000561212 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
ZEB1-222ENST00000561212 SMARCA4P51532 1647 aa13.02□□□□□ -0.32
ZEB1-222ENST00000561212 WIZO95785 1651 aa12.95□□□□□ -0.34
ZEB1-222ENST00000561212 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
ZEB1-222ENST00000561212 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
ZEB1-222ENST00000561212 SCAF1Q9H7N4 1312 aaKnown RBP12.88□□□□□ -0.35
ZEB1-222ENST00000561212 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
ZEB1-222ENST00000561212 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.35
ZEB1-222ENST00000561212 ATAD2BQ9ULI0 1458 aa12.83□□□□□ -0.36
ZEB1-222ENST00000561212 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
ZEB1-222ENST00000561212 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
ZEB1-222ENST00000561212 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
ZEB1-222ENST00000561212 HMGXB3Q12766 1538 aa12.71□□□□□ -0.37
ZEB1-222ENST00000561212 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
ZEB1-222ENST00000561212 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
ZEB1-222ENST00000561212 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
ZEB1-222ENST00000561212 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.41
ZEB1-222ENST00000561212 CFTRP13569 1480 aa12.45□□□□□ -0.42
ZEB1-222ENST00000561212 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
ZEB1-222ENST00000561212 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
ZEB1-222ENST00000561212 POTEHQ6S545 545 aa12.38□□□□□ -0.43
ZEB1-222ENST00000561212 ABCC8Q09428 1581 aa12.38□□□□□ -0.43
ZEB1-222ENST00000561212 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
ZEB1-222ENST00000561212 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
ZEB1-222ENST00000561212 DCAF8L1A6NGE4 600 aa12.35□□□□□ -0.43
ZEB1-222ENST00000561212 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
ZEB1-222ENST00000561212 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
ZEB1-222ENST00000561212 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
ZEB1-222ENST00000561212 WRNQ14191 1432 aaPredicted RBP eCLIP12.31□□□□□ -0.44
ZEB1-222ENST00000561212 LAMC3Q9Y6N6 1575 aa12.29□□□□□ -0.44
ZEB1-222ENST00000561212 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
ZEB1-222ENST00000561212 NESP48681 1621 aa12.28□□□□□ -0.44
ZEB1-222ENST00000561212 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
ZEB1-222ENST00000561212 BIVM-ERCC5R4GMW8 1640 aa12.25□□□□□ -0.45
ZEB1-222ENST00000561212 CUX1P39880 1505 aa12.23□□□□□ -0.45
ZEB1-222ENST00000561212 RNF216Q9NWF9 866 aaPredicted RBP12.22□□□□□ -0.45
ZEB1-222ENST00000561212 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
ZEB1-222ENST00000561212 SOGA1O94964 1423 aa12.16□□□□□ -0.46
ZEB1-222ENST00000561212 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
ZEB1-222ENST00000561212 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
ZEB1-222ENST00000561212 RUSC2Q8N2Y8 1516 aa12.13□□□□□ -0.47
ZEB1-222ENST00000561212 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
ZEB1-222ENST00000561212 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
ZEB1-222ENST00000561212 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
ZEB1-222ENST00000561212 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
ZEB1-222ENST00000561212 EEA1Q15075 1411 aa12.1□□□□□ -0.47
ZEB1-222ENST00000561212 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
ZEB1-222ENST00000561212 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
ZEB1-222ENST00000561212 FGD5Q6ZNL6 1462 aa12.07□□□□□ -0.48
ZEB1-222ENST00000561212 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
ZEB1-222ENST00000561212 NCBP3Q53F19 620 aaKnown RBP12.05□□□□□ -0.48
ZEB1-222ENST00000561212 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
ZEB1-222ENST00000561212 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
ZEB1-222ENST00000561212 MRC2Q9UBG0 1479 aa12.01□□□□□ -0.49
ZEB1-222ENST00000561212 ABCA10Q8WWZ4 1543 aa12□□□□□ -0.49
ZEB1-222ENST00000561212 WDR62O43379 1518 aa11.99□□□□□ -0.49
ZEB1-222ENST00000561212 WDR97A6NE52 1622 aa11.99□□□□□ -0.49
ZEB1-222ENST00000561212 KIF27Q86VH2 1401 aa11.98□□□□□ -0.49
ZEB1-222ENST00000561212 RAD54L2Q9Y4B4 1467 aa11.98□□□□□ -0.49
ZEB1-222ENST00000561212 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
ZEB1-222ENST00000561212 KIF21BO75037 1637 aa11.97□□□□□ -0.49
ZEB1-222ENST00000561212 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
ZEB1-222ENST00000561212 CUX2O14529 1486 aa11.97□□□□□ -0.49
ZEB1-222ENST00000561212 PRXQ9BXM0 1461 aa11.97□□□□□ -0.49
ZEB1-222ENST00000561212 IGF1RP08069 1367 aa11.95□□□□□ -0.5
ZEB1-222ENST00000561212 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
ZEB1-222ENST00000561212 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
ZEB1-222ENST00000561212 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
ZEB1-222ENST00000561212 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
ZEB1-222ENST00000561212 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms