RNA–Protein interactions for RNA: ENST00000561077.1

CCNB2-204, Transcript of cyclin B2, humanhuman

TSL 5

Gene CCNB2, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB2-204ENST00000561077 AEBP2Q6ZN18 517 aaPredicted RBP31.3■■■□□ 2.6
CCNB2-204ENST00000561077 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
CCNB2-204ENST00000561077 SENP3Q9H4L4 574 aaPredicted RBP26.61■■□□□ 1.85
CCNB2-204ENST00000561077 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
CCNB2-204ENST00000561077 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
CCNB2-204ENST00000561077 FOXD1Q16676 465 aa24.75■■□□□ 1.55
CCNB2-204ENST00000561077 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
CCNB2-204ENST00000561077 ABCC9O60706 1549 aa23.59■■□□□ 1.37
CCNB2-204ENST00000561077 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
CCNB2-204ENST00000561077 ADRA2BP18089 450 aa23.45■■□□□ 1.34
CCNB2-204ENST00000561077 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.33
CCNB2-204ENST00000561077 PIAS4Q8N2W9 510 aaPredicted RBP23.24■■□□□ 1.31
CCNB2-204ENST00000561077 MSH5O43196 834 aa22.98■■□□□ 1.27
CCNB2-204ENST00000561077 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
CCNB2-204ENST00000561077 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
CCNB2-204ENST00000561077 NACADO15069 1562 aa22.12■■□□□ 1.13
CCNB2-204ENST00000561077 POTEDQ86YR6 584 aa22.03■■□□□ 1.12
CCNB2-204ENST00000561077 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
CCNB2-204ENST00000561077 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
CCNB2-204ENST00000561077 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
CCNB2-204ENST00000561077 MYO15BQ96JP2 1530 aa21.74■■□□□ 1.07
CCNB2-204ENST00000561077 DCAF8L2P0C7V8 631 aa21.65■■□□□ 1.06
CCNB2-204ENST00000561077 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
CCNB2-204ENST00000561077 SCAF1Q9H7N4 1312 aaKnown RBP21.44■■□□□ 1.02
CCNB2-204ENST00000561077 MAPK8IP2Q13387 824 aaPredicted RBP21.39■■□□□ 1.01
CCNB2-204ENST00000561077 PPP4R3CPQ6ZMV5 832 aa21.37■■□□□ 1.01
CCNB2-204ENST00000561077 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
CCNB2-204ENST00000561077 CECR2Q9BXF3 1484 aa21.31■■□□□ 1
CCNB2-204ENST00000561077 DCAF1Q9Y4B6 1507 aa21.3■■□□□ 1
CCNB2-204ENST00000561077 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
CCNB2-204ENST00000561077 EIF4G1Q04637 1599 aaKnown RBP21.23■□□□□ 0.99
CCNB2-204ENST00000561077 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
CCNB2-204ENST00000561077 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
CCNB2-204ENST00000561077 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
CCNB2-204ENST00000561077 CNKSR2Q8WXI2 1034 aa20.86■□□□□ 0.93
CCNB2-204ENST00000561077 NCBP3Q53F19 620 aaKnown RBP20.68■□□□□ 0.9
CCNB2-204ENST00000561077 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
CCNB2-204ENST00000561077 CUX2O14529 1486 aa20.56■□□□□ 0.88
CCNB2-204ENST00000561077 RNF216Q9NWF9 866 aaPredicted RBP20.55■□□□□ 0.88
CCNB2-204ENST00000561077 KCNA4P22459 653 aa20.42■□□□□ 0.86
CCNB2-204ENST00000561077 NPM3O75607 178 aaKnown RBP20.4■□□□□ 0.86
CCNB2-204ENST00000561077 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
CCNB2-204ENST00000561077 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
CCNB2-204ENST00000561077 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
CCNB2-204ENST00000561077 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
CCNB2-204ENST00000561077 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
CCNB2-204ENST00000561077 SMARCA2P51531 1590 aa20.23■□□□□ 0.83
CCNB2-204ENST00000561077 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
CCNB2-204ENST00000561077 NESP48681 1621 aa20.18■□□□□ 0.82
CCNB2-204ENST00000561077 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
CCNB2-204ENST00000561077 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
CCNB2-204ENST00000561077 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
CCNB2-204ENST00000561077 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
CCNB2-204ENST00000561077 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
CCNB2-204ENST00000561077 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
CCNB2-204ENST00000561077 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
CCNB2-204ENST00000561077 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.76
CCNB2-204ENST00000561077 WDR62O43379 1518 aa19.77■□□□□ 0.76
CCNB2-204ENST00000561077 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
CCNB2-204ENST00000561077 TRIM41Q8WV44 630 aa19.73■□□□□ 0.75
CCNB2-204ENST00000561077 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
CCNB2-204ENST00000561077 RNF39Q9H2S5 420 aa19.66■□□□□ 0.74
CCNB2-204ENST00000561077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.733e-8■■■□□ 17.2
CCNB2-204ENST00000561077 WIZO95785 1651 aa19.59■□□□□ 0.73
CCNB2-204ENST00000561077 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
CCNB2-204ENST00000561077 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
CCNB2-204ENST00000561077 CFTRP13569 1480 aa19.46■□□□□ 0.71
CCNB2-204ENST00000561077 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
CCNB2-204ENST00000561077 OSCARQ8IYS5 282 aa19.42■□□□□ 0.7
CCNB2-204ENST00000561077 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
CCNB2-204ENST00000561077 C1QBPQ07021 282 aaKnown RBP19.39■□□□□ 0.69
CCNB2-204ENST00000561077 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
CCNB2-204ENST00000561077 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
CCNB2-204ENST00000561077 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
CCNB2-204ENST00000561077 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
CCNB2-204ENST00000561077 SLC4A2P04920 1241 aa19.36■□□□□ 0.69
CCNB2-204ENST00000561077 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
CCNB2-204ENST00000561077 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.68
CCNB2-204ENST00000561077 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
CCNB2-204ENST00000561077 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
CCNB2-204ENST00000561077 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
CCNB2-204ENST00000561077 IFT140Q96RY7 1462 aa19.21■□□□□ 0.67
CCNB2-204ENST00000561077 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
CCNB2-204ENST00000561077 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
CCNB2-204ENST00000561077 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
CCNB2-204ENST00000561077 CHD1O14646 1710 aa19.1■□□□□ 0.65
CCNB2-204ENST00000561077 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
CCNB2-204ENST00000561077 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
CCNB2-204ENST00000561077 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
CCNB2-204ENST00000561077 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
CCNB2-204ENST00000561077 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
CCNB2-204ENST00000561077 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
CCNB2-204ENST00000561077 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.623e-8■■■■□ 19.3
CCNB2-204ENST00000561077 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
CCNB2-204ENST00000561077 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
CCNB2-204ENST00000561077 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
CCNB2-204ENST00000561077 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
CCNB2-204ENST00000561077 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
CCNB2-204ENST00000561077 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
CCNB2-204ENST00000561077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms