RNA–Protein interactions for RNA: ENST00000561068.5

RPS17-208, Transcript of ribosomal protein S17, humanhuman

TSL 3

Gene RPS17, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS17-208ENST00000561068 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
RPS17-208ENST00000561068 CHIC1Q5VXU3 224 aa16.48■□□□□ 0.23
RPS17-208ENST00000561068 SENP3Q9H4L4 574 aaPredicted RBP14.83□□□□□ -0.04
RPS17-208ENST00000561068 PHF23Q9BUL5 403 aaPredicted RBP14.72□□□□□ -0.05
RPS17-208ENST00000561068 FOXD1Q16676 465 aa13.95□□□□□ -0.18
RPS17-208ENST00000561068 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
RPS17-208ENST00000561068 PPP6R1Q9UPN7 881 aa13.05□□□□□ -0.32
RPS17-208ENST00000561068 ADRA2BP18089 450 aa13.01□□□□□ -0.33
RPS17-208ENST00000561068 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
RPS17-208ENST00000561068 MSH5O43196 834 aa12.95□□□□□ -0.34
RPS17-208ENST00000561068 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
RPS17-208ENST00000561068 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
RPS17-208ENST00000561068 NISCHQ9Y2I1 1504 aa11.84□□□□□ -0.51
RPS17-208ENST00000561068 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
RPS17-208ENST00000561068 SCAF1Q9H7N4 1312 aaKnown RBP11.7□□□□□ -0.54
RPS17-208ENST00000561068 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
RPS17-208ENST00000561068 DCAF8L1A6NGE4 600 aa11.44□□□□□ -0.58
RPS17-208ENST00000561068 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
RPS17-208ENST00000561068 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
RPS17-208ENST00000561068 CNKSR2Q8WXI2 1034 aa11.27□□□□□ -0.61
RPS17-208ENST00000561068 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
RPS17-208ENST00000561068 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
RPS17-208ENST00000561068 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
RPS17-208ENST00000561068 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
RPS17-208ENST00000561068 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
RPS17-208ENST00000561068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.678e-15■□□□□ 10.7
RPS17-208ENST00000561068 DNAJC5BQ9UF47 199 aa10.75□□□□□ -0.69
RPS17-208ENST00000561068 KCNA4P22459 653 aa10.71□□□□□ -0.69
RPS17-208ENST00000561068 U3KPZ7 1027 aaPredicted RBP10.6□□□□□ -0.71
RPS17-208ENST00000561068 CCDC180Q9P1Z9 1646 aa10.58□□□□□ -0.72
RPS17-208ENST00000561068 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
RPS17-208ENST00000561068 CAPN15O75808 1086 aa10.48□□□□□ -0.73
RPS17-208ENST00000561068 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
RPS17-208ENST00000561068 DSG3P32926 999 aa10.4□□□□□ -0.74
RPS17-208ENST00000561068 ABCC9O60706 1549 aa10.35□□□□□ -0.75
RPS17-208ENST00000561068 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
RPS17-208ENST00000561068 ABCB7O75027 752 aa10.3□□□□□ -0.76
RPS17-208ENST00000561068 ZNF219Q9P2Y4 722 aaPredicted RBP10.15□□□□□ -0.78
RPS17-208ENST00000561068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
RPS17-208ENST00000561068 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
RPS17-208ENST00000561068 APLP2Q06481 763 aa10.11□□□□□ -0.79
RPS17-208ENST00000561068 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
RPS17-208ENST00000561068 POTEHQ6S545 545 aa10.07□□□□□ -0.8
RPS17-208ENST00000561068 SLC4A1APQ9BWU0 796 aaKnown RBP10.04□□□□□ -0.8
RPS17-208ENST00000561068 MYCNP04198 464 aaPredicted RBP10.03□□□□□ -0.8
RPS17-208ENST00000561068 POLA2Q14181 598 aa10□□□□□ -0.81
RPS17-208ENST00000561068 ATF5Q9Y2D1 282 aaPredicted RBP9.98□□□□□ -0.81
RPS17-208ENST00000561068 RB1CC1Q8TDY2 1594 aa9.95□□□□□ -0.82
RPS17-208ENST00000561068 NACADO15069 1562 aa9.93□□□□□ -0.82
RPS17-208ENST00000561068 FOXD4L1Q9NU39 408 aa9.91□□□□□ -0.82
RPS17-208ENST00000561068 ZBTB22O15209 634 aa9.88□□□□□ -0.83
RPS17-208ENST00000561068 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
RPS17-208ENST00000561068 UNC13AQ9UPW8 1703 aa9.85□□□□□ -0.83
RPS17-208ENST00000561068 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
RPS17-208ENST00000561068 DCAF8L2P0C7V8 631 aa9.82□□□□□ -0.84
RPS17-208ENST00000561068 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
RPS17-208ENST00000561068 DCAF1Q9Y4B6 1507 aa9.81□□□□□ -0.84
RPS17-208ENST00000561068 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
RPS17-208ENST00000561068 BICRAQ9NZM4 1560 aa9.72□□□□□ -0.85
RPS17-208ENST00000561068 OSCARQ8IYS5 282 aa9.71□□□□□ -0.86
RPS17-208ENST00000561068 PABPN1Q86U42 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
RPS17-208ENST00000561068 ZBTB12Q9Y330 459 aaPredicted RBP9.62□□□□□ -0.87
RPS17-208ENST00000561068 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
RPS17-208ENST00000561068 REM2Q8IYK8 340 aaPredicted RBP9.6□□□□□ -0.87
RPS17-208ENST00000561068 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
RPS17-208ENST00000561068 SHROOM4Q9ULL8 1493 aa9.53□□□□□ -0.88
RPS17-208ENST00000561068 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
RPS17-208ENST00000561068 ATXN8OSP0DMR3 200 aa9.51□□□□□ -0.89
RPS17-208ENST00000561068 PIP4P2Q8N4L2 257 aa9.51□□□□□ -0.89
RPS17-208ENST00000561068 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.9
RPS17-208ENST00000561068 FBLN2P98095 1184 aa9.43□□□□□ -0.9
RPS17-208ENST00000561068 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
RPS17-208ENST00000561068 CC2D2AQ9P2K1 1620 aa9.41□□□□□ -0.9
RPS17-208ENST00000561068 HAX1O00165 279 aa9.38□□□□□ -0.91
RPS17-208ENST00000561068 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
RPS17-208ENST00000561068 SP7Q8TDD2 431 aaPredicted RBP9.38□□□□□ -0.91
RPS17-208ENST00000561068 SPDYE2BA6NHP3 402 aa9.37□□□□□ -0.91
RPS17-208ENST00000561068 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
RPS17-208ENST00000561068 SPDYE2Q495Y8 402 aa9.37□□□□□ -0.91
RPS17-208ENST00000561068 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
RPS17-208ENST00000561068 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
RPS17-208ENST00000561068 EVX2Q03828 476 aa9.33□□□□□ -0.92
RPS17-208ENST00000561068 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
RPS17-208ENST00000561068 CECR2Q9BXF3 1484 aa9.3□□□□□ -0.92
RPS17-208ENST00000561068 PRKAR2AP13861 404 aaKnown RBP9.27□□□□□ -0.93
RPS17-208ENST00000561068 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
RPS17-208ENST00000561068 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
RPS17-208ENST00000561068 EHMT2Q96KQ7 1210 aa9.24□□□□□ -0.93
RPS17-208ENST00000561068 CHADLQ6NUI6 762 aa9.23□□□□□ -0.93
RPS17-208ENST00000561068 SMARCA4P51532 1647 aa9.21□□□□□ -0.93
RPS17-208ENST00000561068 NCAPD3P42695 1498 aa9.17□□□□□ -0.94
RPS17-208ENST00000561068 BAZ1AQ9NRL2 1556 aaPredicted RBP9.16□□□□□ -0.94
RPS17-208ENST00000561068 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
RPS17-208ENST00000561068 PEG3Q9GZU2 1588 aa9.14□□□□□ -0.95
RPS17-208ENST00000561068 MROH2BQ7Z745 1585 aa9.13□□□□□ -0.95
RPS17-208ENST00000561068 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
RPS17-208ENST00000561068 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
RPS17-208ENST00000561068 HMGXB3Q12766 1538 aa9.11□□□□□ -0.95
RPS17-208ENST00000561068 C19orf67A6NJJ6 358 aa9.09□□□□□ -0.95
RPS17-208ENST00000561068 WIZO95785 1651 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms