RNA–Protein interactions for RNA: ENST00000560787.5

RNF31-224, Transcript of ring finger protein 31, humanhuman

TSL 2

Gene RNF31, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-224ENST00000560787 NISCHQ9Y2I1 1504 aa27.01■■□□□ 1.91
RNF31-224ENST00000560787 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
RNF31-224ENST00000560787 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.3
RNF31-224ENST00000560787 ABCC9O60706 1549 aa22.74■■□□□ 1.23
RNF31-224ENST00000560787 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
RNF31-224ENST00000560787 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
RNF31-224ENST00000560787 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
RNF31-224ENST00000560787 SCRIBQ14160 1630 aa21.87■■□□□ 1.09
RNF31-224ENST00000560787 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
RNF31-224ENST00000560787 NACADO15069 1562 aa21.79■■□□□ 1.08
RNF31-224ENST00000560787 RB1CC1Q8TDY2 1594 aa21.69■■□□□ 1.06
RNF31-224ENST00000560787 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
RNF31-224ENST00000560787 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.064e-7■■■□□ 18.4
RNF31-224ENST00000560787 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
RNF31-224ENST00000560787 CECR2Q9BXF3 1484 aa21.28■■□□□ 1
RNF31-224ENST00000560787 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
RNF31-224ENST00000560787 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
RNF31-224ENST00000560787 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
RNF31-224ENST00000560787 WIZO95785 1651 aa20.84■□□□□ 0.93
RNF31-224ENST00000560787 BAZ1AQ9NRL2 1556 aaPredicted RBP20.77■□□□□ 0.92
RNF31-224ENST00000560787 SMARCA4P51532 1647 aa20.73■□□□□ 0.91
RNF31-224ENST00000560787 HRCP23327 699 aa20.68■□□□□ 0.9
RNF31-224ENST00000560787 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
RNF31-224ENST00000560787 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
RNF31-224ENST00000560787 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
RNF31-224ENST00000560787 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
RNF31-224ENST00000560787 DNAJC5BQ9UF47 199 aa20.44■□□□□ 0.86
RNF31-224ENST00000560787 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
RNF31-224ENST00000560787 BAZ1BQ9UIG0 1483 aaKnown RBP20.42■□□□□ 0.86
RNF31-224ENST00000560787 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
RNF31-224ENST00000560787 CC2D2AQ9P2K1 1620 aa20.32■□□□□ 0.84
RNF31-224ENST00000560787 SMARCA2P51531 1590 aa20.32■□□□□ 0.84
RNF31-224ENST00000560787 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
RNF31-224ENST00000560787 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
RNF31-224ENST00000560787 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
RNF31-224ENST00000560787 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
RNF31-224ENST00000560787 EHMT2Q96KQ7 1210 aa20.24■□□□□ 0.83
RNF31-224ENST00000560787 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
RNF31-224ENST00000560787 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
RNF31-224ENST00000560787 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
RNF31-224ENST00000560787 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.8
RNF31-224ENST00000560787 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
RNF31-224ENST00000560787 NESP48681 1621 aa19.94■□□□□ 0.78
RNF31-224ENST00000560787 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
RNF31-224ENST00000560787 MYT1Q01538 1121 aa19.85■□□□□ 0.77
RNF31-224ENST00000560787 WRNQ14191 1432 aaPredicted RBP eCLIP19.83■□□□□ 0.76
RNF31-224ENST00000560787 CFTRP13569 1480 aa19.82■□□□□ 0.76
RNF31-224ENST00000560787 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
RNF31-224ENST00000560787 SOGA1O94964 1423 aa19.76■□□□□ 0.75
RNF31-224ENST00000560787 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
RNF31-224ENST00000560787 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
RNF31-224ENST00000560787 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
RNF31-224ENST00000560787 CUX1P39880 1505 aa19.61■□□□□ 0.73
RNF31-224ENST00000560787 RANGAP1P46060 587 aaPredicted RBP19.58■□□□□ 0.73
RNF31-224ENST00000560787 CSRNP3Q8WYN3 585 aa19.55■□□□□ 0.72
RNF31-224ENST00000560787 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
RNF31-224ENST00000560787 PDS5BQ9NTI5 1447 aa19.49■□□□□ 0.71
RNF31-224ENST00000560787 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
RNF31-224ENST00000560787 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
RNF31-224ENST00000560787 LAMC3Q9Y6N6 1575 aa19.47■□□□□ 0.71
RNF31-224ENST00000560787 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
RNF31-224ENST00000560787 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
RNF31-224ENST00000560787 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
RNF31-224ENST00000560787 KIF21AQ7Z4S6 1674 aa19.42■□□□□ 0.7
RNF31-224ENST00000560787 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
RNF31-224ENST00000560787 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
RNF31-224ENST00000560787 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
RNF31-224ENST00000560787 CUX2O14529 1486 aa19.37■□□□□ 0.69
RNF31-224ENST00000560787 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
RNF31-224ENST00000560787 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
RNF31-224ENST00000560787 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
RNF31-224ENST00000560787 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.69
RNF31-224ENST00000560787 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
RNF31-224ENST00000560787 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
RNF31-224ENST00000560787 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
RNF31-224ENST00000560787 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.68
RNF31-224ENST00000560787 TTBK1Q5TCY1 1321 aaPredicted RBP19.27■□□□□ 0.68
RNF31-224ENST00000560787 IGF1RP08069 1367 aa19.23■□□□□ 0.67
RNF31-224ENST00000560787 EEA1Q15075 1411 aa19.23■□□□□ 0.67
RNF31-224ENST00000560787 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
RNF31-224ENST00000560787 AQRO60306 1485 aaKnown RBP eCLIP19.2■□□□□ 0.668e-7■■■■□ 21.1
RNF31-224ENST00000560787 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
RNF31-224ENST00000560787 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
RNF31-224ENST00000560787 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
RNF31-224ENST00000560787 CARMIL1Q5VZK9 1371 aa19.14■□□□□ 0.65
RNF31-224ENST00000560787 NEUROD1Q13562 356 aa19.14■□□□□ 0.65
RNF31-224ENST00000560787 CEP162Q5TB80 1403 aa19.12■□□□□ 0.65
RNF31-224ENST00000560787 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
RNF31-224ENST00000560787 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
RNF31-224ENST00000560787 GTF3C3Q9Y5Q9 886 aa19.1■□□□□ 0.65
RNF31-224ENST00000560787 FBLN2P98095 1184 aa19.1■□□□□ 0.65
RNF31-224ENST00000560787 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
RNF31-224ENST00000560787 PRXQ9BXM0 1461 aa19.09■□□□□ 0.65
RNF31-224ENST00000560787 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
RNF31-224ENST00000560787 WDR62O43379 1518 aa19.03■□□□□ 0.64
RNF31-224ENST00000560787 TARBP1Q13395 1621 aaKnown RBP19.01■□□□□ 0.63
RNF31-224ENST00000560787 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
RNF31-224ENST00000560787 KIF21BO75037 1637 aa18.99■□□□□ 0.63
RNF31-224ENST00000560787 CLIP1P30622 1438 aa18.98■□□□□ 0.63
RNF31-224ENST00000560787 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms