RNA–Protein interactions for RNA: ENST00000560510.1

NDUFB4P11-201, Transcript of NADH:ubiquinone oxidoreductase subunit B4 pseudogene 11, humanhuman

BASIC

Gene NDUFB4P11, Length 395 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4P11-201ENST00000560510 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
NDUFB4P11-201ENST00000560510 CHIC1Q5VXU3 224 aa14.88□□□□□ -0.03
NDUFB4P11-201ENST00000560510 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
NDUFB4P11-201ENST00000560510 PHF23Q9BUL5 403 aaPredicted RBP13.38□□□□□ -0.27
NDUFB4P11-201ENST00000560510 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
NDUFB4P11-201ENST00000560510 FOXD1Q16676 465 aa12.79□□□□□ -0.36
NDUFB4P11-201ENST00000560510 MSH5O43196 834 aa12.32□□□□□ -0.44
NDUFB4P11-201ENST00000560510 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
NDUFB4P11-201ENST00000560510 PPP6R1Q9UPN7 881 aa11.37□□□□□ -0.59
NDUFB4P11-201ENST00000560510 ADRA2BP18089 450 aa11.33□□□□□ -0.6
NDUFB4P11-201ENST00000560510 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
NDUFB4P11-201ENST00000560510 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
NDUFB4P11-201ENST00000560510 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
NDUFB4P11-201ENST00000560510 DMRT2Q9Y5R5 561 aa10.7□□□□□ -0.7
NDUFB4P11-201ENST00000560510 MAPK8IP2Q13387 824 aaPredicted RBP10.61□□□□□ -0.71
NDUFB4P11-201ENST00000560510 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
NDUFB4P11-201ENST00000560510 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
NDUFB4P11-201ENST00000560510 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
NDUFB4P11-201ENST00000560510 C1QBPQ07021 282 aaKnown RBP10.25□□□□□ -0.77
NDUFB4P11-201ENST00000560510 POTEHQ6S545 545 aa10.24□□□□□ -0.77
NDUFB4P11-201ENST00000560510 HOXD11P31277 338 aaPredicted RBP10.01□□□□□ -0.81
NDUFB4P11-201ENST00000560510 CCDC180Q9P1Z9 1646 aa9.89□□□□□ -0.83
NDUFB4P11-201ENST00000560510 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
NDUFB4P11-201ENST00000560510 RNF216Q9NWF9 866 aaPredicted RBP9.77□□□□□ -0.85
NDUFB4P11-201ENST00000560510 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
NDUFB4P11-201ENST00000560510 PPP4R3CPQ6ZMV5 832 aa9.69□□□□□ -0.86
NDUFB4P11-201ENST00000560510 KCNA4P22459 653 aa9.64□□□□□ -0.87
NDUFB4P11-201ENST00000560510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.64□□□□□ -0.87
NDUFB4P11-201ENST00000560510 DSG3P32926 999 aa9.49□□□□□ -0.89
NDUFB4P11-201ENST00000560510 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
NDUFB4P11-201ENST00000560510 CAPN15O75808 1086 aa9.46□□□□□ -0.9
NDUFB4P11-201ENST00000560510 DCAF8L2P0C7V8 631 aa9.4□□□□□ -0.9
NDUFB4P11-201ENST00000560510 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.91
NDUFB4P11-201ENST00000560510 SPINK5Q9NQ38 1064 aaPredicted RBP9.35□□□□□ -0.91
NDUFB4P11-201ENST00000560510 ABCC9O60706 1549 aa9.31□□□□□ -0.92
NDUFB4P11-201ENST00000560510 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
NDUFB4P11-201ENST00000560510 NPM3O75607 178 aaKnown RBP9.29□□□□□ -0.92
NDUFB4P11-201ENST00000560510 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
NDUFB4P11-201ENST00000560510 U3KPZ7 1027 aaPredicted RBP9.25□□□□□ -0.93
NDUFB4P11-201ENST00000560510 NACADO15069 1562 aa9.24□□□□□ -0.93
NDUFB4P11-201ENST00000560510 CHRDL2Q6WN34 429 aa9.2□□□□□ -0.94
NDUFB4P11-201ENST00000560510 NCBP3Q53F19 620 aaKnown RBP9.17□□□□□ -0.94
NDUFB4P11-201ENST00000560510 SHROOM4Q9ULL8 1493 aa9.16□□□□□ -0.94
NDUFB4P11-201ENST00000560510 RBM42Q9BTD8 480 aaKnown RBP9.16□□□□□ -0.94
NDUFB4P11-201ENST00000560510 RB1CC1Q8TDY2 1594 aa9.16□□□□□ -0.94
NDUFB4P11-201ENST00000560510 ABCB7O75027 752 aa9.13□□□□□ -0.95
NDUFB4P11-201ENST00000560510 TRHP20396 242 aaPredicted RBP9.12□□□□□ -0.95
NDUFB4P11-201ENST00000560510 EHMT2Q96KQ7 1210 aa9.09□□□□□ -0.95
NDUFB4P11-201ENST00000560510 ZNF219Q9P2Y4 722 aaPredicted RBP9.08□□□□□ -0.96
NDUFB4P11-201ENST00000560510 APLP2Q06481 763 aa9.07□□□□□ -0.96
NDUFB4P11-201ENST00000560510 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
NDUFB4P11-201ENST00000560510 SCRIBQ14160 1630 aa9.02□□□□□ -0.96
NDUFB4P11-201ENST00000560510 ZBTB22O15209 634 aa8.98□□□□□ -0.97
NDUFB4P11-201ENST00000560510 CSRNP3Q8WYN3 585 aa8.97□□□□□ -0.97
NDUFB4P11-201ENST00000560510 HAX1O00165 279 aa8.92□□□□□ -0.98
NDUFB4P11-201ENST00000560510 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
NDUFB4P11-201ENST00000560510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
NDUFB4P11-201ENST00000560510 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
NDUFB4P11-201ENST00000560510 UNC13AQ9UPW8 1703 aa8.85□□□□□ -0.99
NDUFB4P11-201ENST00000560510 PLSCR2Q9NRY7 297 aa8.82□□□□□ -1
NDUFB4P11-201ENST00000560510 SLC4A2P04920 1241 aa8.81□□□□□ -1
NDUFB4P11-201ENST00000560510 PIP4P2Q8N4L2 257 aa8.8□□□□□ -1
NDUFB4P11-201ENST00000560510 PABPN1Q86U42 306 aaKnown RBP eCLIP8.78□□□□□ -1
NDUFB4P11-201ENST00000560510 BICRAQ9NZM4 1560 aa8.78□□□□□ -1
NDUFB4P11-201ENST00000560510 AKT1S1Q96B36 256 aa8.76□□□□□ -1.01
NDUFB4P11-201ENST00000560510 RSF1Q96T23 1441 aaPredicted RBP8.76□□□□□ -1.01
NDUFB4P11-201ENST00000560510 BAZ1AQ9NRL2 1556 aaPredicted RBP8.76□□□□□ -1.01
NDUFB4P11-201ENST00000560510 SAMD1Q6SPF0 538 aaPredicted RBP8.74□□□□□ -1.01
NDUFB4P11-201ENST00000560510 CECR2Q9BXF3 1484 aa8.73□□□□□ -1.01
NDUFB4P11-201ENST00000560510 MROH2BQ7Z745 1585 aa8.69□□□□□ -1.02
NDUFB4P11-201ENST00000560510 POLA2Q14181 598 aa8.69□□□□□ -1.02
NDUFB4P11-201ENST00000560510 LHX8Q68G74 356 aa8.69□□□□□ -1.02
NDUFB4P11-201ENST00000560510 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
NDUFB4P11-201ENST00000560510 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
NDUFB4P11-201ENST00000560510 REM2Q8IYK8 340 aaPredicted RBP8.65□□□□□ -1.02
NDUFB4P11-201ENST00000560510 EVX2Q03828 476 aa8.63□□□□□ -1.03
NDUFB4P11-201ENST00000560510 FXR2P51116 673 aaKnown RBP eCLIP8.62□□□□□ -1.03
NDUFB4P11-201ENST00000560510 WIZO95785 1651 aa8.61□□□□□ -1.03
NDUFB4P11-201ENST00000560510 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
NDUFB4P11-201ENST00000560510 PEG3Q9GZU2 1588 aa8.59□□□□□ -1.03
NDUFB4P11-201ENST00000560510 TOP2AP11388 1531 aaKnown RBP8.58□□□□□ -1.04
NDUFB4P11-201ENST00000560510 PITPNM1O00562 1244 aa8.56□□□□□ -1.04
NDUFB4P11-201ENST00000560510 EIF4G1Q04637 1599 aaKnown RBP8.56□□□□□ -1.04
NDUFB4P11-201ENST00000560510 ATAD2BQ9ULI0 1458 aa8.55□□□□□ -1.04
NDUFB4P11-201ENST00000560510 BAZ1BQ9UIG0 1483 aaKnown RBP8.52□□□□□ -1.05
NDUFB4P11-201ENST00000560510 NCAPD3P42695 1498 aa8.51□□□□□ -1.05
NDUFB4P11-201ENST00000560510 ZBTB12Q9Y330 459 aaPredicted RBP8.49□□□□□ -1.05
NDUFB4P11-201ENST00000560510 HMGXB3Q12766 1538 aa8.49□□□□□ -1.05
NDUFB4P11-201ENST00000560510 CCDC88BA6NC98 1476 aa8.48□□□□□ -1.05
NDUFB4P11-201ENST00000560510 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
NDUFB4P11-201ENST00000560510 GABBR2O75899 941 aa8.46□□□□□ -1.06
NDUFB4P11-201ENST00000560510 MYCNP04198 464 aaPredicted RBP8.44□□□□□ -1.06
NDUFB4P11-201ENST00000560510 CC2D2AQ9P2K1 1620 aa8.43□□□□□ -1.06
NDUFB4P11-201ENST00000560510 TRIM41Q8WV44 630 aa8.42□□□□□ -1.06
NDUFB4P11-201ENST00000560510 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
NDUFB4P11-201ENST00000560510 C19orf67A6NJJ6 358 aa8.37□□□□□ -1.07
NDUFB4P11-201ENST00000560510 PRKAR2AP13861 404 aaKnown RBP8.37□□□□□ -1.07
NDUFB4P11-201ENST00000560510 CADPSQ9ULU8 1353 aa8.31□□□□□ -1.08
NDUFB4P11-201ENST00000560510 CFTRP13569 1480 aa8.3□□□□□ -1.08
NDUFB4P11-201ENST00000560510 WRNQ14191 1432 aaPredicted RBP eCLIP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms