RNA–Protein interactions for RNA: ENST00000560275.5

IRF9-207, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-207ENST00000560275 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
IRF9-207ENST00000560275 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
IRF9-207ENST00000560275 ABCC9O60706 1549 aa24.84■■□□□ 1.57
IRF9-207ENST00000560275 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
IRF9-207ENST00000560275 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
IRF9-207ENST00000560275 NACADO15069 1562 aa23.65■■□□□ 1.38
IRF9-207ENST00000560275 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
IRF9-207ENST00000560275 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
IRF9-207ENST00000560275 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
IRF9-207ENST00000560275 DCAF1Q9Y4B6 1507 aa23.25■■□□□ 1.31
IRF9-207ENST00000560275 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
IRF9-207ENST00000560275 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
IRF9-207ENST00000560275 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
IRF9-207ENST00000560275 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
IRF9-207ENST00000560275 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
IRF9-207ENST00000560275 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
IRF9-207ENST00000560275 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.17
IRF9-207ENST00000560275 CECR2Q9BXF3 1484 aa22.37■■□□□ 1.17
IRF9-207ENST00000560275 NCAPD3P42695 1498 aa21.93■■□□□ 1.1
IRF9-207ENST00000560275 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
IRF9-207ENST00000560275 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
IRF9-207ENST00000560275 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
IRF9-207ENST00000560275 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
IRF9-207ENST00000560275 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
IRF9-207ENST00000560275 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
IRF9-207ENST00000560275 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
IRF9-207ENST00000560275 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
IRF9-207ENST00000560275 NESP48681 1621 aa21.43■■□□□ 1.02
IRF9-207ENST00000560275 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
IRF9-207ENST00000560275 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
IRF9-207ENST00000560275 WIZO95785 1651 aa21.31■■□□□ 1
IRF9-207ENST00000560275 CUX2O14529 1486 aa21.3■■□□□ 1
IRF9-207ENST00000560275 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
IRF9-207ENST00000560275 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
IRF9-207ENST00000560275 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
IRF9-207ENST00000560275 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
IRF9-207ENST00000560275 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
IRF9-207ENST00000560275 CFTRP13569 1480 aa21.07■□□□□ 0.96
IRF9-207ENST00000560275 THOC2Q8NI27 1593 aaKnown RBP21.05■□□□□ 0.96
IRF9-207ENST00000560275 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
IRF9-207ENST00000560275 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
IRF9-207ENST00000560275 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
IRF9-207ENST00000560275 CCDC88BA6NC98 1476 aa20.96■□□□□ 0.95
IRF9-207ENST00000560275 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
IRF9-207ENST00000560275 WDR62O43379 1518 aa20.89■□□□□ 0.94
IRF9-207ENST00000560275 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
IRF9-207ENST00000560275 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
IRF9-207ENST00000560275 TOPBP1Q92547 1522 aa20.59■□□□□ 0.89
IRF9-207ENST00000560275 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
IRF9-207ENST00000560275 IFT140Q96RY7 1462 aa20.55■□□□□ 0.88
IRF9-207ENST00000560275 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
IRF9-207ENST00000560275 ZNF608Q9ULD9 1512 aaPredicted RBP20.49■□□□□ 0.87
IRF9-207ENST00000560275 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
IRF9-207ENST00000560275 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
IRF9-207ENST00000560275 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
IRF9-207ENST00000560275 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.854e-7■■■□□ 18.2
IRF9-207ENST00000560275 SOGA1O94964 1423 aa20.36■□□□□ 0.85
IRF9-207ENST00000560275 RAD54L2Q9Y4B4 1467 aa20.36■□□□□ 0.85
IRF9-207ENST00000560275 CUX1P39880 1505 aa20.33■□□□□ 0.85
IRF9-207ENST00000560275 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
IRF9-207ENST00000560275 TDRD9Q8NDG6 1382 aaKnown RBP20.32■□□□□ 0.84
IRF9-207ENST00000560275 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
IRF9-207ENST00000560275 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
IRF9-207ENST00000560275 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
IRF9-207ENST00000560275 FBLN2P98095 1184 aa20.18■□□□□ 0.82
IRF9-207ENST00000560275 WRNQ14191 1432 aaPredicted RBP eCLIP20.13■□□□□ 0.81
IRF9-207ENST00000560275 GRIN2BQ13224 1484 aa20.12■□□□□ 0.81
IRF9-207ENST00000560275 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
IRF9-207ENST00000560275 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
IRF9-207ENST00000560275 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
IRF9-207ENST00000560275 CHMP7Q8WUX9 453 aaPredicted RBP20.1■□□□□ 0.81
IRF9-207ENST00000560275 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
IRF9-207ENST00000560275 MAGI1Q96QZ7 1491 aaPredicted RBP20.07■□□□□ 0.8
IRF9-207ENST00000560275 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
IRF9-207ENST00000560275 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
IRF9-207ENST00000560275 SYNJ2O15056 1496 aa20.02■□□□□ 0.8
IRF9-207ENST00000560275 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
IRF9-207ENST00000560275 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
IRF9-207ENST00000560275 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
IRF9-207ENST00000560275 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
IRF9-207ENST00000560275 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
IRF9-207ENST00000560275 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
IRF9-207ENST00000560275 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
IRF9-207ENST00000560275 CHD1O14646 1710 aa19.96■□□□□ 0.79
IRF9-207ENST00000560275 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
IRF9-207ENST00000560275 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
IRF9-207ENST00000560275 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
IRF9-207ENST00000560275 GRIN2AQ12879 1464 aa19.85■□□□□ 0.77
IRF9-207ENST00000560275 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
IRF9-207ENST00000560275 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
IRF9-207ENST00000560275 NUP160Q12769 1436 aa19.82■□□□□ 0.76
IRF9-207ENST00000560275 IGF1RP08069 1367 aa19.79■□□□□ 0.76
IRF9-207ENST00000560275 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
IRF9-207ENST00000560275 KIF27Q86VH2 1401 aa19.74■□□□□ 0.75
IRF9-207ENST00000560275 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
IRF9-207ENST00000560275 JPH4Q96JJ6 628 aa19.68■□□□□ 0.74
IRF9-207ENST00000560275 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
IRF9-207ENST00000560275 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
IRF9-207ENST00000560275 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
IRF9-207ENST00000560275 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms