RNA–Protein interactions for RNA: ENST00000560160.1

SIX5-202, Transcript of SIX homeobox 5, humanhuman

APPRIS ALT2 TSL 2

Gene SIX5, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-202ENST00000560160 NISCHQ9Y2I1 1504 aa45.84■■■■■ 4.93
SIX5-202ENST00000560160 CCDC180Q9P1Z9 1646 aa39.87■■■■□ 3.97
SIX5-202ENST00000560160 ZCCHC6Q5VYS8 1495 aaKnown RBP38.64■■■■□ 3.78
SIX5-202ENST00000560160 DCAF1Q9Y4B6 1507 aa38.05■■■■□ 3.68
SIX5-202ENST00000560160 MYO15BQ96JP2 1530 aa37.46■■■■□ 3.59
SIX5-202ENST00000560160 SHROOM4Q9ULL8 1493 aa37.39■■■■□ 3.58
SIX5-202ENST00000560160 DCAF8L2P0C7V8 631 aa37.29■■■■□ 3.56
SIX5-202ENST00000560160 ABCC9O60706 1549 aa37.1■■■■□ 3.53
SIX5-202ENST00000560160 NACADO15069 1562 aa36.97■■■■□ 3.51
SIX5-202ENST00000560160 SCRIBQ14160 1630 aa36.51■■■■□ 3.43
SIX5-202ENST00000560160 RB1CC1Q8TDY2 1594 aa36.49■■■■□ 3.43
SIX5-202ENST00000560160 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.38
SIX5-202ENST00000560160 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
SIX5-202ENST00000560160 RSF1Q96T23 1441 aaPredicted RBP35.69■■■■□ 3.3
SIX5-202ENST00000560160 CECR2Q9BXF3 1484 aa35.5■■■■□ 3.27
SIX5-202ENST00000560160 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
SIX5-202ENST00000560160 MROH2BQ7Z745 1585 aa35.38■■■■□ 3.25
SIX5-202ENST00000560160 BAZ1AQ9NRL2 1556 aaPredicted RBP35.36■■■■□ 3.25
SIX5-202ENST00000560160 SMARCA4P51532 1647 aa35.15■■■■□ 3.22
SIX5-202ENST00000560160 WIZO95785 1651 aa35.11■■■■□ 3.21
SIX5-202ENST00000560160 CHIC1Q5VXU3 224 aa35.08■■■■□ 3.21
SIX5-202ENST00000560160 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
SIX5-202ENST00000560160 DNAJC5BQ9UF47 199 aa34.89■■■■□ 3.18
SIX5-202ENST00000560160 TOP2AP11388 1531 aaKnown RBP34.83■■■■□ 3.17
SIX5-202ENST00000560160 HRCP23327 699 aa34.81■■■■□ 3.16
SIX5-202ENST00000560160 PEG3Q9GZU2 1588 aa34.81■■■■□ 3.16
SIX5-202ENST00000560160 SMARCA2P51531 1590 aa34.51■■■■□ 3.12
SIX5-202ENST00000560160 EIF4G1Q04637 1599 aaKnown RBP34.51■■■■□ 3.12
SIX5-202ENST00000560160 ATAD2BQ9ULI0 1458 aa34.42■■■■□ 3.1
SIX5-202ENST00000560160 CCDC88BA6NC98 1476 aa34.42■■■■□ 3.1
SIX5-202ENST00000560160 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.07
SIX5-202ENST00000560160 HMGXB3Q12766 1538 aa34.12■■■■□ 3.05
SIX5-202ENST00000560160 NCAPD3P42695 1498 aa34.1■■■■□ 3.05
SIX5-202ENST00000560160 TRIM41Q8WV44 630 aa34.09■■■■□ 3.05
SIX5-202ENST00000560160 PCGF6Q9BYE7 350 aa33.87■■■■□ 3.01
SIX5-202ENST00000560160 ABCC8Q09428 1581 aa33.77■■■■□ 3
SIX5-202ENST00000560160 PELP1Q8IZL8 1130 aaKnown RBP33.63■■■□□ 2.97
SIX5-202ENST00000560160 LOC105371045A0A1W2PR82 267 aa33.62■■■□□ 2.97
SIX5-202ENST00000560160 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
SIX5-202ENST00000560160 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.96
SIX5-202ENST00000560160 TRIM26Q12899 539 aaPredicted RBP33.46■■■□□ 2.95
SIX5-202ENST00000560160 ZEB1P37275 1124 aaPredicted RBP33.45■■■□□ 2.95
SIX5-202ENST00000560160 CFTRP13569 1480 aa33.45■■■□□ 2.95
SIX5-202ENST00000560160 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
SIX5-202ENST00000560160 EEA1Q15075 1411 aa33.42■■■□□ 2.94
SIX5-202ENST00000560160 PRDM2Q13029 1718 aa33.42■■■□□ 2.94
SIX5-202ENST00000560160 PPARGC1BQ86YN6 1023 aaKnown RBP33.34■■■□□ 2.93
SIX5-202ENST00000560160 FAM9AQ8IZU1 332 aaPredicted RBP33.33■■■□□ 2.93
SIX5-202ENST00000560160 TOP2BQ02880 1626 aa33.32■■■□□ 2.92
SIX5-202ENST00000560160 BIVM-ERCC5R4GMW8 1640 aa33.32■■■□□ 2.92
SIX5-202ENST00000560160 SOGA1O94964 1423 aa33.23■■■□□ 2.91
SIX5-202ENST00000560160 CADPSQ9ULU8 1353 aa33.18■■■□□ 2.9
SIX5-202ENST00000560160 RUSC2Q8N2Y8 1516 aa33.08■■■□□ 2.89
SIX5-202ENST00000560160 CUX1P39880 1505 aa33.07■■■□□ 2.88
SIX5-202ENST00000560160 CSRNP3Q8WYN3 585 aa33.04■■■□□ 2.88
SIX5-202ENST00000560160 KIF21BO75037 1637 aa32.98■■■□□ 2.87
SIX5-202ENST00000560160 TNIKQ9UKE5 1360 aa32.91■■■□□ 2.86
SIX5-202ENST00000560160 GOLGA3Q08378 1498 aa32.89■■■□□ 2.86
SIX5-202ENST00000560160 CEP164Q9UPV0 1460 aa32.87■■■□□ 2.85
SIX5-202ENST00000560160 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
SIX5-202ENST00000560160 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
SIX5-202ENST00000560160 EHMT2Q96KQ7 1210 aa32.7■■■□□ 2.83
SIX5-202ENST00000560160 CEP162Q5TB80 1403 aa32.7■■■□□ 2.83
SIX5-202ENST00000560160 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
SIX5-202ENST00000560160 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
SIX5-202ENST00000560160 DNMBPQ6XZF7 1577 aa32.67■■■□□ 2.82
SIX5-202ENST00000560160 NESP48681 1621 aa32.66■■■□□ 2.82
SIX5-202ENST00000560160 PRXQ9BXM0 1461 aa32.64■■■□□ 2.82
SIX5-202ENST00000560160 FGD5Q6ZNL6 1462 aa32.59■■■□□ 2.81
SIX5-202ENST00000560160 RAPGEF2Q9Y4G8 1499 aa32.56■■■□□ 2.8
SIX5-202ENST00000560160 TOPBP1Q92547 1522 aa32.53■■■□□ 2.8
SIX5-202ENST00000560160 UBTFP17480 764 aaKnown RBP32.51■■■□□ 2.8
SIX5-202ENST00000560160 PDS5BQ9NTI5 1447 aa32.5■■■□□ 2.79
SIX5-202ENST00000560160 MYT1Q01538 1121 aa32.48■■■□□ 2.79
SIX5-202ENST00000560160 CUX2O14529 1486 aa32.44■■■□□ 2.78
SIX5-202ENST00000560160 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
SIX5-202ENST00000560160 POLA1P09884 1462 aaPredicted RBP32.39■■■□□ 2.78
SIX5-202ENST00000560160 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.78
SIX5-202ENST00000560160 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
SIX5-202ENST00000560160 SCAF1Q9H7N4 1312 aaKnown RBP32.36■■■□□ 2.77
SIX5-202ENST00000560160 IGF1RP08069 1367 aa32.34■■■□□ 2.77
SIX5-202ENST00000560160 CLIP1P30622 1438 aa32.34■■■□□ 2.77
SIX5-202ENST00000560160 WDR97A6NE52 1622 aa32.32■■■□□ 2.76
SIX5-202ENST00000560160 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
SIX5-202ENST00000560160 RAD54L2Q9Y4B4 1467 aa32.22■■■□□ 2.75
SIX5-202ENST00000560160 VPS8Q8N3P4 1428 aa32.17■■■□□ 2.74
SIX5-202ENST00000560160 CARMIL1Q5VZK9 1371 aa32.14■■■□□ 2.74
SIX5-202ENST00000560160 CUL7Q14999 1698 aa32.14■■■□□ 2.74
SIX5-202ENST00000560160 ABCA5Q8WWZ7 1642 aa32.13■■■□□ 2.73
SIX5-202ENST00000560160 MRC2Q9UBG0 1479 aa32.09■■■□□ 2.73
SIX5-202ENST00000560160 TARBP1Q13395 1621 aaKnown RBP32.07■■■□□ 2.72
SIX5-202ENST00000560160 ACIN1Q9UKV3 1341 aaKnown RBP32.03■■■□□ 2.72
SIX5-202ENST00000560160 ARAP1Q96P48 1450 aa32.02■■■□□ 2.72
SIX5-202ENST00000560160 WDR62O43379 1518 aa31.96■■■□□ 2.71
SIX5-202ENST00000560160 CENPBP07199 599 aaPredicted RBP31.94■■■□□ 2.7
SIX5-202ENST00000560160 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
SIX5-202ENST00000560160 ARHGAP35Q9NRY4 1499 aa31.92■■■□□ 2.7
SIX5-202ENST00000560160 ERCC6Q03468 1493 aa31.86■■■□□ 2.69
SIX5-202ENST00000560160 CTTNBP2Q8WZ74 1663 aa31.84■■■□□ 2.69
SIX5-202ENST00000560160 TDRD9Q8NDG6 1382 aaKnown RBP31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms