RNA–Protein interactions for RNA: ENST00000559709.5

APBA2-209, Transcript of amyloid beta precursor protein binding family A member 2, humanhuman

TSL 4

Gene APBA2, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA2-209ENST00000559709 NISCHQ9Y2I1 1504 aa59.44■■■■■ 7.11
APBA2-209ENST00000559709 CCDC180Q9P1Z9 1646 aa52.94■■■■■ 6.07
APBA2-209ENST00000559709 ABCC9O60706 1549 aa52.35■■■■■ 5.97
APBA2-209ENST00000559709 RB1CC1Q8TDY2 1594 aa50.09■■■■■ 5.61
APBA2-209ENST00000559709 DCAF8L2P0C7V8 631 aa49.94■■■■■ 5.59
APBA2-209ENST00000559709 NACADO15069 1562 aa49.94■■■■■ 5.59
APBA2-209ENST00000559709 MYO15BQ96JP2 1530 aa49.5■■■■■ 5.52
APBA2-209ENST00000559709 ZCCHC6Q5VYS8 1495 aaKnown RBP49.41■■■■■ 5.5
APBA2-209ENST00000559709 DCAF1Q9Y4B6 1507 aa49.13■■■■■ 5.45
APBA2-209ENST00000559709 PABPN1Q86U42 306 aaKnown RBP eCLIP48.91■■■■■ 5.42
APBA2-209ENST00000559709 UNC13AQ9UPW8 1703 aa48.88■■■■■ 5.42
APBA2-209ENST00000559709 BICRAQ9NZM4 1560 aa48.62■■■■■ 5.37
APBA2-209ENST00000559709 DNAJC5BQ9UF47 199 aa48.54■■■■■ 5.36
APBA2-209ENST00000559709 SCRIBQ14160 1630 aa48.33■■■■■ 5.33
APBA2-209ENST00000559709 SHROOM4Q9ULL8 1493 aa48.03■■■■■ 5.28
APBA2-209ENST00000559709 EIF4G1Q04637 1599 aaKnown RBP47.37■■■■■ 5.17
APBA2-209ENST00000559709 CC2D2AQ9P2K1 1620 aa47.29■■■■■ 5.16
APBA2-209ENST00000559709 CECR2Q9BXF3 1484 aa47.08■■■■■ 5.13
APBA2-209ENST00000559709 SMARCA4P51532 1647 aa46.17■■■■■ 4.98
APBA2-209ENST00000559709 NCAPD3P42695 1498 aa46.14■■■■■ 4.98
APBA2-209ENST00000559709 ATAD2BQ9ULI0 1458 aa46.1■■■■■ 4.97
APBA2-209ENST00000559709 BAZ1AQ9NRL2 1556 aaPredicted RBP46.07■■■■■ 4.97
APBA2-209ENST00000559709 SMARCA2P51531 1590 aa45.96■■■■■ 4.95
APBA2-209ENST00000559709 MROH2BQ7Z745 1585 aa45.82■■■■■ 4.93
APBA2-209ENST00000559709 HMGXB3Q12766 1538 aa45.81■■■■■ 4.92
APBA2-209ENST00000559709 PEG3Q9GZU2 1588 aa45.74■■■■■ 4.91
APBA2-209ENST00000559709 BAZ1BQ9UIG0 1483 aaKnown RBP45.67■■■■■ 4.9
APBA2-209ENST00000559709 WIZO95785 1651 aa45.27■■■■■ 4.84
APBA2-209ENST00000559709 NESP48681 1621 aa45.18■■■■■ 4.82
APBA2-209ENST00000559709 RSF1Q96T23 1441 aaPredicted RBP45.16■■■■■ 4.82
APBA2-209ENST00000559709 ERCC6Q03468 1493 aa45.13■■■■■ 4.82
APBA2-209ENST00000559709 LAMC3Q9Y6N6 1575 aa44.93■■■■■ 4.78
APBA2-209ENST00000559709 CUX2O14529 1486 aa44.79■■■■■ 4.76
APBA2-209ENST00000559709 CADPSQ9ULU8 1353 aa44.79■■■■■ 4.76
APBA2-209ENST00000559709 TOP2AP11388 1531 aaKnown RBP44.75■■■■■ 4.76
APBA2-209ENST00000559709 PDS5BQ9NTI5 1447 aa44.69■■■■■ 4.75
APBA2-209ENST00000559709 KIF21AQ7Z4S6 1674 aa44.53■■■■■ 4.72
APBA2-209ENST00000559709 THOC2Q8NI27 1593 aaKnown RBP44.52■■■■■ 4.72
APBA2-209ENST00000559709 CFTRP13569 1480 aa44.4■■■■■ 4.7
APBA2-209ENST00000559709 CCDC88BA6NC98 1476 aa44.29■■■■■ 4.68
APBA2-209ENST00000559709 FANCD2Q9BXW9 1451 aa44.25■■■■■ 4.67
APBA2-209ENST00000559709 MRC2Q9UBG0 1479 aa44.25■■■■■ 4.67
APBA2-209ENST00000559709 CEP164Q9UPV0 1460 aa44.21■■■■■ 4.67
APBA2-209ENST00000559709 WDR62O43379 1518 aa44.1■■■■■ 4.65
APBA2-209ENST00000559709 DNAJC5Q9H3Z4 198 aa44.03■■■■■ 4.64
APBA2-209ENST00000559709 PRDM2Q13029 1718 aa43.87■■■■■ 4.61
APBA2-209ENST00000559709 URB2Q14146 1524 aaKnown RBP43.83■■■■■ 4.61
APBA2-209ENST00000559709 SUPT5HO00267 1087 aaKnown RBP43.74■■■■■ 4.59
APBA2-209ENST00000559709 TOPBP1Q92547 1522 aa43.48■■■■■ 4.55
APBA2-209ENST00000559709 ABCC8Q09428 1581 aa43.44■■■■■ 4.54
APBA2-209ENST00000559709 DNMBPQ6XZF7 1577 aa43.36■■■■■ 4.53
APBA2-209ENST00000559709 IFT140Q96RY7 1462 aa43.32■■■■■ 4.53
APBA2-209ENST00000559709 ZNF608Q9ULD9 1512 aaPredicted RBP43.19■■■■■ 4.5
APBA2-209ENST00000559709 POLA1P09884 1462 aaPredicted RBP43.09■■■■■ 4.49
APBA2-209ENST00000559709 TARBP1Q13395 1621 aaKnown RBP43.01■■■■■ 4.48
APBA2-209ENST00000559709 CUX1P39880 1505 aa42.99■■■■■ 4.47
APBA2-209ENST00000559709 RAD54L2Q9Y4B4 1467 aa42.94■■■■■ 4.47
APBA2-209ENST00000559709 OSCARQ8IYS5 282 aa42.94■■■■■ 4.46
APBA2-209ENST00000559709 SOGA1O94964 1423 aa42.94■■■■■ 4.46
APBA2-209ENST00000559709 EIF4G3O43432 1585 aaKnown RBP42.93■■■■■ 4.46
APBA2-209ENST00000559709 FGD5Q6ZNL6 1462 aa42.93■■■■■ 4.46
APBA2-209ENST00000559709 AQRO60306 1485 aaKnown RBP eCLIP42.91■■■■■ 4.46
APBA2-209ENST00000559709 TDRD9Q8NDG6 1382 aaKnown RBP42.78■■■■■ 4.44
APBA2-209ENST00000559709 WDR97A6NE52 1622 aa42.6■■■■■ 4.41
APBA2-209ENST00000559709 WRNQ14191 1432 aaPredicted RBP eCLIP42.57■■■■■ 4.415e-6■■■■■ 29.2
APBA2-209ENST00000559709 FBLN2P98095 1184 aa42.5■■■■■ 4.39
APBA2-209ENST00000559709 ABCA10Q8WWZ4 1543 aa42.48■■■■■ 4.39
APBA2-209ENST00000559709 TOP2BQ02880 1626 aa42.47■■■■■ 4.39
APBA2-209ENST00000559709 SNAPC4Q5SXM2 1469 aa42.47■■■■■ 4.39
APBA2-209ENST00000559709 GRIN2BQ13224 1484 aa42.46■■■■■ 4.39
APBA2-209ENST00000559709 SYNJ1O43426 1573 aa42.46■■■■■ 4.39
APBA2-209ENST00000559709 BIVM-ERCC5R4GMW8 1640 aa42.45■■■■■ 4.39
APBA2-209ENST00000559709 CHD1O14646 1710 aa42.43■■■■■ 4.38
APBA2-209ENST00000559709 GAPVD1Q14C86 1478 aa42.41■■■■■ 4.38
APBA2-209ENST00000559709 TRIM41Q8WV44 630 aa42.39■■■■■ 4.38
APBA2-209ENST00000559709 MAGI1Q96QZ7 1491 aaPredicted RBP42.37■■■■■ 4.37
APBA2-209ENST00000559709 CHMP7Q8WUX9 453 aaPredicted RBP42.31■■■■■ 4.36
APBA2-209ENST00000559709 ABCA5Q8WWZ7 1642 aa42.31■■■■■ 4.36
APBA2-209ENST00000559709 PBRM1Q86U86 1689 aa42.25■■■■■ 4.35
APBA2-209ENST00000559709 SYNJ2O15056 1496 aa42.23■■■■■ 4.35
APBA2-209ENST00000559709 RIMBP3CA6NJZ7 1639 aa42.21■■■■■ 4.35
APBA2-209ENST00000559709 RIMBP3BA6NNM3 1639 aa42.21■■■■■ 4.35
APBA2-209ENST00000559709 RIMBP3Q9UFD9 1639 aa42.21■■■■■ 4.35
APBA2-209ENST00000559709 ARHGEF11O15085 1522 aa42.18■■■■■ 4.34
APBA2-209ENST00000559709 CLASP1Q7Z460 1538 aa42.03■■■■■ 4.32
APBA2-209ENST00000559709 ERICH3Q5RHP9 1530 aa41.95■■■■■ 4.31
APBA2-209ENST00000559709 ADAMTS12P58397 1594 aa41.94■■■■■ 4.3
APBA2-209ENST00000559709 FHAD1B1AJZ9 1412 aa41.91■■■■■ 4.3
APBA2-209ENST00000559709 GRIN2AQ12879 1464 aa41.91■■■■■ 4.3
APBA2-209ENST00000559709 CYB5RLQ6IPT4 315 aa41.9■■■■■ 4.3
APBA2-209ENST00000559709 ARAP1Q96P48 1450 aa41.83■■■■■ 4.29
APBA2-209ENST00000559709 NUP160Q12769 1436 aa41.75■■■■■ 4.27
APBA2-209ENST00000559709 KIF27Q86VH2 1401 aa41.72■■■■■ 4.27
APBA2-209ENST00000559709 CEP170Q5SW79 1584 aa41.71■■■■■ 4.27
APBA2-209ENST00000559709 IGF1RP08069 1367 aa41.65■■■■■ 4.26
APBA2-209ENST00000559709 ERCC6L2Q5T890 1561 aa41.45■■■■■ 4.23
APBA2-209ENST00000559709 CUL7Q14999 1698 aa41.43■■■■■ 4.22
APBA2-209ENST00000559709 SHROOM2Q13796 1616 aa41.43■■■■■ 4.22
APBA2-209ENST00000559709 JPH4Q96JJ6 628 aa41.38■■■■■ 4.21
APBA2-209ENST00000559709 CARMIL1Q5VZK9 1371 aa41.37■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms