RNA–Protein interactions for RNA: ENST00000559343.1

RORA-210, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-210ENST00000559343 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
RORA-210ENST00000559343 CCDC180Q9P1Z9 1646 aa26.9■■□□□ 1.9
RORA-210ENST00000559343 ABCC9O60706 1549 aa26.02■■□□□ 1.76
RORA-210ENST00000559343 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
RORA-210ENST00000559343 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
RORA-210ENST00000559343 NACADO15069 1562 aa25.3■■□□□ 1.64
RORA-210ENST00000559343 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
RORA-210ENST00000559343 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
RORA-210ENST00000559343 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
RORA-210ENST00000559343 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
RORA-210ENST00000559343 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
RORA-210ENST00000559343 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.5
RORA-210ENST00000559343 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
RORA-210ENST00000559343 PABPN1Q86U42 306 aaKnown RBP eCLIP24.35■■□□□ 1.49
RORA-210ENST00000559343 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
RORA-210ENST00000559343 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
RORA-210ENST00000559343 CECR2Q9BXF3 1484 aa23.57■■□□□ 1.36
RORA-210ENST00000559343 CC2D2AQ9P2K1 1620 aa23.56■■□□□ 1.36
RORA-210ENST00000559343 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
RORA-210ENST00000559343 SMARCA4P51532 1647 aa23.47■■□□□ 1.35
RORA-210ENST00000559343 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
RORA-210ENST00000559343 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
RORA-210ENST00000559343 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
RORA-210ENST00000559343 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
RORA-210ENST00000559343 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
RORA-210ENST00000559343 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
RORA-210ENST00000559343 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
RORA-210ENST00000559343 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
RORA-210ENST00000559343 WIZO95785 1651 aa23.03■■□□□ 1.28
RORA-210ENST00000559343 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
RORA-210ENST00000559343 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
RORA-210ENST00000559343 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
RORA-210ENST00000559343 LAMC3Q9Y6N6 1575 aa22.66■■□□□ 1.22
RORA-210ENST00000559343 CCDC88BA6NC98 1476 aa22.64■■□□□ 1.21
RORA-210ENST00000559343 CFTRP13569 1480 aa22.59■■□□□ 1.21
RORA-210ENST00000559343 NESP48681 1621 aa22.56■■□□□ 1.2
RORA-210ENST00000559343 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
RORA-210ENST00000559343 ERCC6Q03468 1493 aa22.46■■□□□ 1.19
RORA-210ENST00000559343 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
RORA-210ENST00000559343 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
RORA-210ENST00000559343 PRDM2Q13029 1718 aa22.26■■□□□ 1.15
RORA-210ENST00000559343 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
RORA-210ENST00000559343 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
RORA-210ENST00000559343 CUX2O14529 1486 aa22.24■■□□□ 1.15
RORA-210ENST00000559343 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
RORA-210ENST00000559343 WDR62O43379 1518 aa22.16■■□□□ 1.14
RORA-210ENST00000559343 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
RORA-210ENST00000559343 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
RORA-210ENST00000559343 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
RORA-210ENST00000559343 DNMBPQ6XZF7 1577 aa22.01■■□□□ 1.11
RORA-210ENST00000559343 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
RORA-210ENST00000559343 CUX1P39880 1505 aa21.9■■□□□ 1.1
RORA-210ENST00000559343 IFT140Q96RY7 1462 aa21.89■■□□□ 1.09
RORA-210ENST00000559343 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
RORA-210ENST00000559343 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
RORA-210ENST00000559343 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
RORA-210ENST00000559343 SOGA1O94964 1423 aa21.79■■□□□ 1.08
RORA-210ENST00000559343 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
RORA-210ENST00000559343 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
RORA-210ENST00000559343 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
RORA-210ENST00000559343 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
RORA-210ENST00000559343 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
RORA-210ENST00000559343 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
RORA-210ENST00000559343 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
RORA-210ENST00000559343 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
RORA-210ENST00000559343 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.05
RORA-210ENST00000559343 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
RORA-210ENST00000559343 GAPVD1Q14C86 1478 aa21.53■■□□□ 1.04
RORA-210ENST00000559343 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
RORA-210ENST00000559343 GRIN2BQ13224 1484 aa21.52■■□□□ 1.04
RORA-210ENST00000559343 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
RORA-210ENST00000559343 ABCA5Q8WWZ7 1642 aa21.49■■□□□ 1.03
RORA-210ENST00000559343 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
RORA-210ENST00000559343 MAGI1Q96QZ7 1491 aaPredicted RBP21.46■■□□□ 1.03
RORA-210ENST00000559343 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
RORA-210ENST00000559343 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.02
RORA-210ENST00000559343 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
RORA-210ENST00000559343 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
RORA-210ENST00000559343 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
RORA-210ENST00000559343 IGF1RP08069 1367 aa21.34■■□□□ 1.01
RORA-210ENST00000559343 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
RORA-210ENST00000559343 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
RORA-210ENST00000559343 DNAJC5Q9H3Z4 198 aa21.28■■□□□ 1
RORA-210ENST00000559343 ADAMTS12P58397 1594 aa21.27■□□□□ 0.99
RORA-210ENST00000559343 EEA1Q15075 1411 aa21.26■□□□□ 0.99
RORA-210ENST00000559343 FBLN2P98095 1184 aa21.25■□□□□ 0.99
RORA-210ENST00000559343 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
RORA-210ENST00000559343 CUL7Q14999 1698 aa21.21■□□□□ 0.99
RORA-210ENST00000559343 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
RORA-210ENST00000559343 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
RORA-210ENST00000559343 CHD1O14646 1710 aa21.18■□□□□ 0.98
RORA-210ENST00000559343 NUP160Q12769 1436 aa21.16■□□□□ 0.98
RORA-210ENST00000559343 CSRNP3Q8WYN3 585 aa21.14■□□□□ 0.97
RORA-210ENST00000559343 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
RORA-210ENST00000559343 PRXQ9BXM0 1461 aa21.1■□□□□ 0.97
RORA-210ENST00000559343 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
RORA-210ENST00000559343 CEP170Q5SW79 1584 aa21.04■□□□□ 0.96
RORA-210ENST00000559343 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
RORA-210ENST00000559343 JPH4Q96JJ6 628 aa20.94■□□□□ 0.94
RORA-210ENST00000559343 FAM9AQ8IZU1 332 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms